BAC Information

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BAC

Clone NameB6Ng01-156I05
Chromosome11 (Build37)
Map Location 64,706,681 - 64,879,154
singlet/doubletdoublet
Overlap geneElac2, AU040829
Upstream geneHs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1, LOC626959
Downstream gene1700086D15Rik, LOC100041790, Myocd, Map2k4, Zkscan6, Dnahc9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156I05.bB6Ng01-156I05.g
ACCDH950998DH950999
length1,084376
definitionDH950998|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I05, 5' end.DH950999|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,706,681 - 64,707,784)(64,878,773 - 64,879,154)
sequence
gaattctggggatctgaactcaggcccttatgcttagagggaaagcattt
tacctactgagctaacttccaattcctatatttttattttcacaaaatgg
aaaatattctaggaaggcaaattatgaagactaatacaacagacaggaac
cctttaaagcctcacactggaagaaccaaacattgctgaaggaccgtgta
tgtaaagactcttagccctaatgctaggggctcctttcagacactgaagg
tttatttgaaatgttaactttgaggtcaatgaatcttattttgaagcaga
aaaataataaaaacgtttttttaaaaaactgtctacccggtttccaaagt
cggactagttctggggaacagctaaggaagaatttctgttggcacgcacc
agaactcttgaagctgaggctggaggattccaagttctagaaaaacctag
agagcatcactagatactgcctccaagggaaaaagtggtagtaaaattta
aatagtaatatacataattacttttcttttttttagaattaattttttat
taggtattttcctcatttacatttccaatgctatccaaaaagtccccaat
acactcccccccacactcccctacccacccactcccacttcttggccctg
gtgttcccctgtactgaggcatataaagtttgcaagtccaatgggcctct
ctttccagtgatggccgactaggccatcttttgatacatatgcagctaga
gtcaagagctctggggtactggttagttcatattgttgttgcacctatag
ggttgcagatccctttagctccttgggtactttctctagctcctccattg
ggggccctgtgatccataattactcttcatagtctcaatagccactttta
gaatttggaacattatttttattaaatatatattaattatatttttatac
aatcctatatatattttttcatgtctctctctctttgaattcctccagat
gttacacactttctacccagcaattcatgctatttctcactctcaacaaa
tttataaacaaacaaacaaaccctaaagggacaa
aagaaaactggacgccgtttatgctaaacgaagtcattatcgaagaataa
agggaaaatacaggattttcaggcttcgaattaggccttgcagcgtgaat
ttgaaggtaaagtttgcatatcaagtggactgaagtttcacggagtggac
tgtattcagagggaagccatgcggtgagtggaacccagaagaacttgaag
ttactgtgctgtccaggaggaagacgttcgttttccctctcgccttccta
ggcacctgggccagggccctgcagatcagattaacacctgagagctcgcc
aggactcccaacatgtgtaaggcatgcacacggggtagttaggcgatgag
taacggggcggtgggggtggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64706681_64707784
seq2: B6Ng01-156I05.b_48_1131

seq1  GAATTCTGGGGATCTGAACTCAGGCCCTTATGCTTAGAGGGAAAGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGATCTGAACTCAGGCCCTTATGCTTAGAGGGAAAGCATTT  50

seq1  TACCTACTGAGCTAACTTCCAATTCCTATATTTTTATTTTCACAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTGAGCTAACTTCCAATTCCTATATTTTTATTTTCACAAAATGG  100

seq1  AAAATATTCTAGGAAGGCAAATTATGAAGACTAATACAACAGACAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCTAGGAAGGCAAATTATGAAGACTAATACAACAGACAGGAAC  150

seq1  CCTTTAAAGCCTCACACTGGAAGAACCAAACATTGCTGAAGGACCGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAGCCTCACACTGGAAGAACCAAACATTGCTGAAGGACCGTGTA  200

seq1  TGTAAAGACTCTTAGCCCTAATGCTAGGGGCTCCTTTCAGACACTGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGACTCTTAGCCCTAATGCTAGGGGCTCCTTTCAGACACTGAAGG  250

seq1  TTTATTTGAAATGTTAACTTTGAGGTCAATGAATCTTATTTTGAAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGAAATGTTAACTTTGAGGTCAATGAATCTTATTTTGAAGCAGA  300

seq1  AAAATAATAAAAACGTTTTTTTAAAAAACTGTCTACCCGGTTTCCAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAAAACGTTTTTTTAAAAAACTGTCTACCCGGTTTCCAAAGT  350

seq1  CGGACTAGTTCTGGGGAACAGCTAAGGAAGAATTTCTGTTGGCACGCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTAGTTCTGGGGAACAGCTAAGGAAGAATTTCTGTTGGCACGCACC  400

seq1  AGAACTCTTGAAGCTGAGGCTGGAGGATTCCAAGTTCTAGAAAAACCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTTGAAGCTGAGGCTGGAGGATTCCAAGTTCTAGAAAAACCTAG  450

seq1  AGAGCATCACTAGATACTGCCTCCAAGGGAAAAAGTGGTAGTAAAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCACTAGATACTGCCTCCAAGGGAAAAAGTGGTAGTAAAATTTA  500

seq1  AATAGTAATATACATAATTACTTTTCTTTTTTTTAGAATTAATTTTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAATATACATAATTACTTTTCTTTTTTTTAGAATTAATTTTTTAT  550

seq1  TAGGTATTTTCCTCATTTACATTTCCAATGCTATCCAAAAAGTCCCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTTTCCTCATTTACATTTCCAATGCTATCCAAAAAGTCCCCAAT  600

seq1  ACACTCCCCCCCACACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCCCCCACACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTG  650

seq1  GTGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  700

seq1  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGA  750

seq1  GTCAAGAGCTCTGGGGTACTGGTTAGTTCATATTGTTGTTGCACCTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGCTCTGGGGTACTGGTTAGTTCATATTGTTGTTGCACCTATAG  800

seq1  GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTG  850

seq1  GGGGCCCTGTGATCCATAATTACTCTTCATAGTCTCAATAGCCACTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCCTGTGATCCATAATTACTCTTCATAGTCTCAATAGCCACTTTTA  900

seq1  GAATTTGGAACATTTATTTTTATTAAAATATAATATTAATTATATTTTTA  950
      |||||||||||| ||||||||||| |||||| ||||||||||||||||||
seq2  GAATTTGGAACA-TTATTTTTATT-AAATAT-ATATTAATTATATTTTTA  947

seq1  TAACAATCCTTATAATATATTTTTTCATGTTCTCTCTTCTCTTTGAATTC  1000
      | ||||||| ||| ||||||||||||||| |||||| |||||||||||||
seq2  T-ACAATCC-TAT-ATATATTTTTTCATG-TCTCTC-TCTCTTTGAATTC  992

seq1  CTCCCAGATGTTACACACCTTCCTACCCAGCCAATTTCATGCTATTTCTC  1050
      || |||||||||||||| ||| |||||||||  | |||||||||||||||
seq2  CT-CCAGATGTTACACA-CTTTCTACCCAGC--AATTCATGCTATTTCTC  1038

seq1  ACTCTCAAACCAAAATTTAATAAAACAAAACAAAACAAAACCCTAAAAGG  1100
      ||||||||  ||||  || |||||   |||||||   |||||||||| ||
seq2  ACTCTCAA--CAAA--TTTATAAA--CAAACAAA--CAAACCCTAAAGGG  1080

seq1  ACAA  1104
      ||||
seq2  ACAA  1084

seq1: chr11_64878773_64879154
seq2: B6Ng01-156I05.g_66_447 (reverse)

seq1  CCACCACCACCCCCACCGCCCCGTTACTCATCGCCTAACTACCCCGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCACCCCCACCGCCCCGTTACTCATCGCCTAACTACCCCGTGTG  50

seq1  CATGCCTTACACATGTTGGGAGTCCTGGCGAGCTCTCAGGTGTTAATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTACACATGTTGGGAGTCCTGGCGAGCTCTCAGGTGTTAATCTG  100

seq1  ATCTGCAGGGCCCTGGCCCAGGTGCCTAGGAAGGCGAGAGGGAAAACGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAGGGCCCTGGCCCAGGTGCCTAGGAAGGCGAGAGGGAAAACGAA  150

seq1  CGTCTTCCTCCTGGACAGCACAGTAACTTCAAGTTCTTCTGGGTTCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCCTCCTGGACAGCACAGTAACTTCAAGTTCTTCTGGGTTCCACT  200

seq1  CACCGCATGGCTTCCCTCTGAATACAGTCCACTCCGTGAAACTTCAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCATGGCTTCCCTCTGAATACAGTCCACTCCGTGAAACTTCAGTCC  250

seq1  ACTTGATATGCAAACTTTACCTTCAAATTCACGCTGCAAGGCCTAATTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATATGCAAACTTTACCTTCAAATTCACGCTGCAAGGCCTAATTCG  300

seq1  AAGCCTGAAAATCCTGTATTTTCCCTTTATTCTTCGATAATGACTTCGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAAAATCCTGTATTTTCCCTTTATTCTTCGATAATGACTTCGTT  350

seq1  TAGCATAAACGGCGTCCAGTTTTCTTGAATTC  382
      ||||||||||||||||||||||||||||||||
seq2  TAGCATAAACGGCGTCCAGTTTTCTTGAATTC  382