BAC Information

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BAC

Clone NameB6Ng01-157F09
Chromosome11 (Build37)
Map Location 6,754,108 - 6,928,068
singlet/doubletdoublet
Overlap geneLOC100041332
Upstream geneAebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343
Downstream geneAdcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157F09.bB6Ng01-157F09.g
ACCDH951599DH951600
length1,094466
definitionDH951599|Mus musculus domesticus DNA, BAC clone: B6Ng01-157F09, 5' end.DH951600|Mus musculus domesticus DNA, BAC clone: B6Ng01-157F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,926,966 - 6,928,068)(6,754,108 - 6,754,579)
sequence
gaattccactcgttatctaacatcccccccccaccttgtccctaactctg
agtggcatgtccagtttttgtttgggttgaaatattcaccttcaaggttt
ctccaagattttcctacttggccaaaaacaaacataaataaacaaataaa
caaacaaataagccattcttccttccccgcccccccctctttttctctct
ctctgtctcctgcttggcaggtgctgtatgtcatctattcattctgtgtc
tataagatgagaaagggctgggttagattttgaaaagtaaaaatagtgat
ctatcttctttactctacctgactttttcactcagactccttactcccca
ctgcttgataataactcagctcatgaacttccgccttgagcatccttcct
ggatgaccctccactggagaagtgggtattcaggtctcctcccagactag
ctgggatgctgtggtcaagtgtgtgaaccatgggtttccactaaaatcca
atatcccctctaacagtcacattatggcttgacctctctggtccttgact
gtttatctgcagagtggagaacaatctccaactgtaatggaaatcagggc
atgggagatgactggcattgctccaaacacttggaaataacacagcgtac
tacttgtaaagtaaccatgggtcaaagaaagctcaagagaaaggtgtgga
actgaatacaaactgcaagcaacaaccccactcctggaacccaacgaaag
tgttgttgggatgccaactgcccacagtagcagaaggagacagggacact
ggtagcctaagtcccagtatacagaaaggaagagtaagtgagcccaataa
gagcagagaatgggaactaattaagactgcaggagagagaaaacaatgac
attaaaaacaaaaataatgccagcaagatcaagttagggcccttgccacc
agcctgaaacctgagttgatccctgagctccacatggtggaaagaaggaa
ccaactctggcatgtcttaacatgcatgttgtggcagagtcactagctca
cttgcatatatgcctcctagcacacactgttgtgcatgccacac
aaggttggtttagtaattagacaaaaatgcagcagtgcccttttaaggaa
gagtgctcttaaacccattccactcagtgtggcctcagaagttctaatca
gcatgctaaaagaagaaacagttataacggcagtaaacagtatggccaca
taatgctcccatacatgaatcccgaggaattaacagatttacaagaacag
cttccataaggctgctgcatatcacaaggtcaatatataaaactcaatta
tgtgcaactaagaagatgatagttctaggtgggacaacaatatgaactaa
tcagtacccccagagctcgtgtctctagctgcatatgtagcagaagatga
cctactaggccatcattgggacgaaaggccccttggtcttgcaaacttta
tatgtctcagtacaggggaacaccaaggccaagaagtgggagtgggtggg
taggggagcagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6926966_6928068
seq2: B6Ng01-157F09.b_50_1143 (reverse)

seq1  GTGTGTGCATGCACACACGTGTGTGCTTGGGAGCATATGTGCAAGTGAGC  50
      ||||| |||||||||   ||||||||| ||  |||||| |||||||||||
seq2  GTGTG-GCATGCACAACAGTGTGTGCTAGGAGGCATATATGCAAGTGAGC  49

seq1  TAGTGTACTCCTGCCACAACATGCATGTTAAGGCCATGCCAGAGTTGGTT  100
      ||||| ||| ||||||||||||||||||||| | ||||||||||||||||
seq2  TAGTG-ACT-CTGCCACAACATGCATGTTAA-GACATGCCAGAGTTGGTT  96

seq1  CCTTCTTTCCACCATGTGGGGCTCAGGGATCAAACTCAGGTTTTCAGGCT  150
      ||||||||||||||||||| ||||||||||| |||||||| |||||||| 
seq2  CCTTCTTTCCACCATGTGGAGCTCAGGGATC-AACTCAGG-TTTCAGGC-  143

seq1  TGGTGGCAAGGGCCCTTAACTTGATCTTGCTGGCATTATTTTTTGTTTTT  200
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  TGGTGGCAAGGGCCC-TAACTTGATCTTGCTGGCATTA-TTTTTGTTTTT  191

seq1  AATGTCATTGTTTTCTCTCTCCTGCAGTCTTAATTAGTTCCCATTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTGTTTTCTCTCTCCTGCAGTCTTAATTAGTTCCCATTCTCTG  241

seq1  CTCTTATTGGGCTCACTTACTCTTCCTTTCTGTATACTGGGACTTAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTGGGCTCACTTACTCTTCCTTTCTGTATACTGGGACTTAGGCT  291

seq1  ACCAGTGTCCCTGTCTCCTTCTGCTACTGTGGGCAGTTGGCATCCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGTCCCTGTCTCCTTCTGCTACTGTGGGCAGTTGGCATCCCAACA  341

seq1  ACACTTTCGTTGGGTTCCAGGAGTGGGGTTGTTGCTTGCAGTTTGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCGTTGGGTTCCAGGAGTGGGGTTGTTGCTTGCAGTTTGTATTC  391

seq1  AGTTCCACACCTTTCTCTTGAGCTTTCTTTGACCCATGGTTACTTTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACACCTTTCTCTTGAGCTTTCTTTGACCCATGGTTACTTTACAA  441

seq1  GTAGTACGCTGTGTTATTTCCAAGTGTTTGGAGCAATGCCAGTCATCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACGCTGTGTTATTTCCAAGTGTTTGGAGCAATGCCAGTCATCTCC  491

seq1  CATGCCCTGATTTCCATTACAGTTGGAGATTGTTCTCCACTCTGCAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCTGATTTCCATTACAGTTGGAGATTGTTCTCCACTCTGCAGATA  541

seq1  AACAGTCAAGGACCAGAGAGGTCAAGCCATAATGTGACTGTTAGAGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCAAGGACCAGAGAGGTCAAGCCATAATGTGACTGTTAGAGGGGA  591

seq1  TATTGGATTTTAGTGGAAACCCATGGTTCACACACTTGACCACAGCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATTTTAGTGGAAACCCATGGTTCACACACTTGACCACAGCATCC  641

seq1  CAGCTAGTCTGGGAGGAGACCTGAATACCCACTTCTCCAGTGGAGGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGTCTGGGAGGAGACCTGAATACCCACTTCTCCAGTGGAGGGTCA  691

seq1  TCCAGGAAGGATGCTCAAGGCGGAAGTTCATGAGCTGAGTTATTATCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAGGATGCTCAAGGCGGAAGTTCATGAGCTGAGTTATTATCAAG  741

seq1  CAGTGGGGAGTAAGGAGTCTGAGTGAAAAAGTCAGGTAGAGTAAAGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGGAGTAAGGAGTCTGAGTGAAAAAGTCAGGTAGAGTAAAGAAGA  791

seq1  TAGATCACTATTTTTACTTTTCAAAATCTAACCCAGCCCTTTCTCATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCACTATTTTTACTTTTCAAAATCTAACCCAGCCCTTTCTCATCTT  841

seq1  ATAGACACAGAATGAATAGATGACATACAGCACCTGCCAAGCAGGAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACAGAATGAATAGATGACATACAGCACCTGCCAAGCAGGAGACA  891

seq1  GAGAGAGAGAAAAAGAGGGGGGGGCGGGGAAGGAAGAATGGCTTATTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAAAAGAGGGGGGGGCGGGGAAGGAAGAATGGCTTATTTGT  941

seq1  TTGTTTATTTGTTTATTTATGTTTGTTTTTGGCCAAGTAGGAAAATCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTGTTTATTTATGTTTGTTTTTGGCCAAGTAGGAAAATCTTG  991

seq1  GAGAAACCTTGAAGGTGAATATTTCAACCCAAACAAAAACTGGACATGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCTTGAAGGTGAATATTTCAACCCAAACAAAAACTGGACATGCC  1041

seq1  ACTCAGAGTTAGGGACAAGGTGGGGGGGGGATGTTAGATAACGAGTGGAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGTTAGGGACAAGGTGGGGGGGGGATGTTAGATAACGAGTGGAA  1091

seq1  TTC  1103
      |||
seq2  TTC  1094

seq1: chr11_6754108_6754579
seq2: B6Ng01-157F09.g_69_540

seq1  GAATTCAAGGTTGGTTTAGTAATTAGACAAAAATGCAGCAGTGCCCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTTGGTTTAGTAATTAGACAAAAATGCAGCAGTGCCCTTTT  50

seq1  AAGGAAGAGTGCTCTTAAACCCATTCCACTCAGTGTGGCCTCAGAAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAGTGCTCTTAAACCCATTCCACTCAGTGTGGCCTCAGAAGTTC  100

seq1  TAATCAGCATGCTAAAAGAAGAAACAGTTATAACGGCAGTAAACAGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCATGCTAAAAGAAGAAACAGTTATAACGGCAGTAAACAGTATG  150

seq1  GCCACATAATGCTCCCATACATGAATCCCGAGGAATTAACAGATTTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATAATGCTCCCATACATGAATCCCGAGGAATTAACAGATTTACAA  200

seq1  GAACAGCTTCCATAAGGCTGCTGCATATCACAAGGTCAATATATAAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCTTCCATAAGGCTGCTGCATATCACAAGGTCAATATATAAAACT  250

seq1  CAATTATGTGCAACTAAGAAGATGATAGTTCTAGGTGGGACAACAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATGTGCAACTAAGAAGATGATAGTTCTAGGTGGGACAACAATATG  300

seq1  AACTAATCAGTACCCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATCAGTACCCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGA  350

seq1  AGATGACCTACTAGGCCATCATTGGGACGAAAGGCCCCTTGGTCTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACCTACTAGGCCATCATTGGGACGAAAGGCCCCTTGGTCTTGCAA  400

seq1  ACTTTATATGTCTCAGTACAGGGGAACACCAAGGCCAAGAAGTGGGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGTCTCAGTACAGGGGAACACCAAGGCCAAGAAGTGGGAGTG  450

seq1  GGTGGGTAGGGGAGCAGGGAGG  472
      ||||||||||||||||||||||
seq2  GGTGGGTAGGGGAGCAGGGAGG  472