BAC Information

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BAC

Clone NameB6Ng01-157K14
Chromosome11 (Build37)
Map Location 37,675,832 - 37,676,922
singlet/doubletsinglet
Overlap genenone
Upstream geneOdz2, LOC100039148
Downstream geneLOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K14.bB6Ng01-157K14.g
ACCDH951834DH951835
length6951,084
definitionDH951834|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K14, 5' end.DH951835|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggattgttgagttgacatcgaatttctatcaatctctgtgag
atatcagataatgcttataattttttgtgtgtttgattttctcattagtc
ttacttccaaccctatacatactatttctctctctctctctctctctctc
tctctctctctctctctctctctctctctctctctccacctctcctcaca
ggcacatttgcacacagaggggaaaaaaaaaaaaaaaaacccgtgggggt
gcctccgcctgtgtgagagagagagagagagagatgtgacatgtgtgccc
tttgtcccactccacagagagaaagagagagagacacaggagaagggtgg
ccattgtcagtacctgggttgtgtggctgcctcatagagggagtggagag
ctgtgtggagggttgtgagctgtgtctgtgtgttgtgggagagagtcttc
tgagctacatcatatatccagggagcgagcacacacttttatgtagatat
gtttagatattatgcagagcatatagcgagtctgggtggatggtctatgt
gagacactctaaaaacggtgtgcgagagagacgcgtagatggctcagaga
tcatatatatcacaacacatgcgcgactagatagatgtatatatatacat
tgcgtgtgaggagaagtgatgatactcttcacatgctctgagaga

gaattccctccccatcactactctgtcttttctctgtatcaatactgaaa
tctgtgtctagtaacaaaatatgcatttcttccgtgtgtgcctgcacact
ctcatgatgataagactccagtactctttgttggtcctaacccatatgct
ctccagcatgttcctgccctcggtcaggctatttccatatgaatgtatgt
cttcctgacattcgcccctgttcttcctcctgtgtagcaatctgtttctt
tcagggtggtgataccttctattactatggtgccacaagcattccctgag
tttgtgccttcaaagtccaggtaacagtgagaaagtcctgtacctgggtt
gtccatctccaatgtctcatttccaaggaacaatcatcacctgcattcta
atgaggaatagggagaattgtgtttaaatttttcttgtgcctagatgact
ttttaaacaaacagccaggacttgatcttaaagtttgttacaaatgcaaa
atcgcagcactcctacataattacatcatttcctttccccctaccttcct
ccaaccccatgtcatggaacctctcattcattttccttctctagtatata
gatatgtacatatatatgaatacataatataatattatatgtgaaaatac
attacatatatacaatataacatatatttacatatttacttgtaaatata
taatataaatatttacatgtacatatttacatatattataaatatatatg
ttatatatttgttaggtatataagtatatattaaatatagtattatatat
aaatctataacatatatttataatttatatgtttgatatgtaaagatata
tttataatatatacacatatatgtaaatttatatattcatatatattcat
aagacctgcttagtatatatactgtaactgtctggaaatggtttcggttg
actacttggtaatgcataagctttgggaagtttctgggggaaagtcattc
tccccttgtcagcattcctccgtaactgcacatgcaggatttaaggttat
ttctttaagatgcagttaagaatttggtggctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37675832_37676922
seq2: B6Ng01-157K14.g_67_1150 (reverse)

seq1  TAAGCCACCAAAATTCCTAACTGCATTCTAAAGAAATAACCTTAAACTCC  50
      ||||||||| |||||| |||||||||  |||||||||||||||||| |||
seq2  TAAGCCACC-AAATTCTTAACTGCATCTTAAAGAAATAACCTTAAA-TCC  48

seq1  TGCATGTGCAGCTCACGGAGGAGTGCTGACAGAGGGAGAATGACTTTCCC  100
      ||||||||||| | |||||||| ||||||||  |||||||||||||||||
seq2  TGCATGTGCAG-TTACGGAGGAATGCTGACAAGGGGAGAATGACTTTCCC  97

seq1  CCAGGAAACTTCCCAAAGCTTATGCAATACCAAGTAGTCAACCCGAAACC  150
      ||| |||||||||||||||||||||| |||||||||||||| ||||||||
seq2  CCA-GAAACTTCCCAAAGCTTATGCATTACCAAGTAGTCAA-CCGAAACC  145

seq1  ATTTCCAGACAAGTTACAGTATATATACTAAGCAGGTCTTATGAATATAT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGAC-AGTTACAGTATATATACTAAGCAGGTCTTATGAATATAT  194

seq1  ATGGAATATATAAATTTACATATATGTGTATATATTATAAATATATCTTT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-GAATATATAAATTTACATATATGTGTATATATTATAAATATATCTTT  243

seq1  ACATATCAAACATATAAATTATAAATATATGTTATAGATTTATATATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCAAACATATAAATTATAAATATATGTTATAGATTTATATATAAT  293

seq1  ACTATATTTAATATATACTTATATACCTAACAAATATATAACATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATTTAATATATACTTATATACCTAACAAATATATAACATATATAT  343

seq1  TTATAATATATGTAAATATGTACATGTAAATATTTATATTATATATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATATGTAAATATGTACATGTAAATATTTATATTATATATTTAC  393

seq1  AAGTAAATATGTAAATATATGTTATATTGTATATATGTAATGTATTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATATGTAAATATATGTTATATTGTATATATGTAATGTATTTTCA  443

seq1  CATATAATATTATATTATGTATTCATATATATGTACATATCTATATACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATATTATATTATGTATTCATATATATGTACATATCTATATACTA  493

seq1  GAGAAGGAAAATGAATGAGAGGTTCCATGACATGGGGTTGGAGGAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAATGAATGAGAGGTTCCATGACATGGGGTTGGAGGAAGGTA  543

seq1  GGGGGAAAGGAAATGATGTAATTATGTAGGAGTGCTGCGATTTTGCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAAGGAAATGATGTAATTATGTAGGAGTGCTGCGATTTTGCATTT  593

seq1  GTAACAAACTTTAAGATCAAGTCCTGGCTGTTTGTTTAAAAAGTCATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAACTTTAAGATCAAGTCCTGGCTGTTTGTTTAAAAAGTCATCTA  643

seq1  GGCACAAGAAAAATTTAAACACAATTCTCCCTATTCCTCATTAGAATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGAAAAATTTAAACACAATTCTCCCTATTCCTCATTAGAATGCA  693

seq1  GGTGATGATTGTTCCTTGGAAATGAGACATTGGAGATGGACAACCCAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGATTGTTCCTTGGAAATGAGACATTGGAGATGGACAACCCAGGT  743

seq1  ACAGGACTTTCTCACTGTTACCTGGACTTTGAAGGCACAAACTCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACTTTCTCACTGTTACCTGGACTTTGAAGGCACAAACTCAGGGAA  793

seq1  TGCTTGTGGCACCATAGTAATAGAAGGTATCACCACCCTGAAAGAAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGGCACCATAGTAATAGAAGGTATCACCACCCTGAAAGAAACAG  843

seq1  ATTGCTACACAGGAGGAAGAACAGGGGCGAATGTCAGGAAGACATACATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTACACAGGAGGAAGAACAGGGGCGAATGTCAGGAAGACATACATT  893

seq1  CATATGGAAATAGCCTGACCGAGGGCAGGAACATGCTGGAGAGCATATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGAAATAGCCTGACCGAGGGCAGGAACATGCTGGAGAGCATATGG  943

seq1  GTTAGGACCAACAAAGAGTACTGGAGTCTTATCATCATGAGAGTGTGCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACCAACAAAGAGTACTGGAGTCTTATCATCATGAGAGTGTGCAG  993

seq1  GCACACACGGAAGAAATGCATATTTTGTTACTAGACACAGATTTCAGTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACGGAAGAAATGCATATTTTGTTACTAGACACAGATTTCAGTAT  1043

seq1  TGATACAGAGAAAAGACAGAGTAGTGATGGGGAGGGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGAGAAAAGACAGAGTAGTGATGGGGAGGGAATTC  1084


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