BAC Information

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BAC

Clone NameB6Ng01-158G22
Chromosome14 (Build37)11 (Build37)
Map Location 92,367,149 - 92,367,65342,989,560 - 42,990,728
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG639558
Downstream geneEG665377, LOC638252
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158G22.bB6Ng01-158G22.g
ACCDH952381DH952382
length1,0281,138
definitionDH952381|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G22, 5' end.DH952382|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,367,149 - 92,367,653)(42,989,560 - 42,990,728)
sequence
gaattctttgtttagctctgggccccatttttaatggggttatttgactt
tctggagtccaccttcttgagttctttatatatatatagaatattagtcc
cctatctgatttaggataggtaaagattctttctcaatctgttggtggcc
tttttgtcttattgactgtatcttttgccagtaagacctattcttatggt
gatatgtgattaagaaaagacatgtgacatagtactaccggaggatccag
caatacctctcctgggcatatatccagaagatgccccaactggtaagaag
gacacatgctccactatgttcatagcagccttatttataatagccagaag
ctggaaagaccccagatgcccctcaacagaggaatggatacagaaaatgt
ggtacatctacacaatggagtactactcagctattaaaaagaatgaattt
atgaaattcctagccaaatggatggacctggagggcatcatcctgagtga
ggtaacacattcacaaaggaactcacacaatatgtactcactgataagtg
gatattagccccaaacctaggatacccaagatataagatacaatttgcta
aacacatgaaactcaagaagaatgaagactgaagtgtggacactatgccc
ctccttagaattgggaacaaaacacccttggaaggagttacagagacaaa
gtttggagctgagatgaaaggatggaccatgtagagactgccatatccag
ggatccaccccataatcagcatccaaacgctgacaccattgcatacacta
gcaagattttatcgaaaggacccagatgtagctgtctcttgtgagactat
gctcggggtcttagcaacacaaaagtggatgcttcacagtcagctaatgg
atggatcacagggctccctatggaggagctagagaaagtagccaaggagc
tacagggatctgcaaccctatagatggaacaacataatcaactaaccagt
accccggagcttcttgactctagctgca
gaattcactattagctaatgcggtaccacagagtttcccccagtgtattg
aacaaagatatagatgagagttgcaagggaggagaacactgcgcagaaaa
ataagaccaaagataatagtaaacatgttttaaattctgtatcctgtagg
acttctctgatcctttaataagccctaaggagacgaaggaatgtgtagct
tcctaaatatttcagcacagaaatcttttattccaaggaacagatcccat
aactgacattttggaaggatgggatcactacttaaagacttgctgcagat
acacagtgagcactcagaatgcaccatcactgtccctcgggagctttccc
aaacacccctaccctttcccatgccacagtgcaacaatgccctaagtagg
aataccttgaaaatgttcccccacatattcttgacataaactcactgaca
acgtcttgaaaactgaaacaacggaaaggtaccattctggtggaaaaaac
aaacaaactcatcataataagaacaagcagtaaattgccatccctccagg
ttccttttactacatggccacccttctgaacacatcatcttttgggtcca
tacctcaccctgtaaggtaggcattgctaacctcttctgagagatgaaaa
ttctggggaacagtaaagacagatctcactattgtctcagaagttgtaaa
cacctcctaatatgatttgatttctgtagaaacttaacagtcttgaataa
tgagtttcaatggctttttgttaacttgtttttttttttctctacatttc
tattttctatgagaccctcattcttcccaaaggacttttacaaacctcag
acattgctagaagtccctacctcaaatttaattacattactcagaaatgg
tgaggaattgaagttggcttcttggacaagcatttcccaaagcagataaa
ctcaacacagtccctagctcttgaaaatatggttcatggtcaagtcaact
atagctagacctcatagatatctcatgacggtcaatgtacaatattaagg
tgctgagaacattttaaacagtactcattacattcataaacttaagagag
ggaattcctggatgatacaactatcattgacaggtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_92367149_92367653
seq2: B6Ng01-158G22.b_826_1074 (reverse)

seq1  TGCAGCTAGAGTCAAG-AGTTCCGGGGTACTGGTTAGTTCATAATGTTGT  49
      |||||||||||||||| || ||||||||||||||||||| || |||||||
seq2  TGCAGCTAGAGTCAAGAAGCTCCGGGGTACTGGTTAGTTGATTATGTTGT  50

seq1  TCCACCCATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAG  99
      |||| | |||||||||||||||||| ||||||||||| ||||||||||||
seq2  TCCATCTATAGGGTTGCAGATCCCTGTAGCTCCTTGGCTACTTTCTCTAG  100

seq1  CTCCTCCATTGGGAGCCCTGTGCAGGATAAGCATTCTATGTTATATTAGA  149
      ||||||||| ||||||||||||      |  ||| |        ||||| 
seq2  CTCCTCCATAGGGAGCCCTGTG------ATCCATCC--------ATTAG-  135

seq1  ATATGTTTTGGGGTACATAAGAAATTTTCCCTTGGGTGGAGTATTATCAC  199
                                 |  ||   ||| || ||   |||
seq2  --------------------------CTGACT---GTGAAGCAT--CCAC  154

seq1  CTTCAATATCCCAGTGATGTTCATCTCTCATGCTGAGAATAAAAGCTGAC  249
       ||          ||| ||     ||   |  | ||| |||     |  |
seq2  TTT---------TGTGTTG-----CTAAGACCCCGAGCATA----GTCTC  186

seq1  ACAAGTTACAGCATATTCTGAAACCCAATGAGTATACATGCTGGGAATTA  299
      |||||  |||||                      ||||| |||||   | 
seq2  ACAAGAGACAGC----------------------TACAT-CTGGGTCCTT  213

seq1  AAGAAATAAAA----AATAATCTTTGCAAGGGTACAAGGTCAGAGAGAAA  345
        |  ||||||      || | | ||||| |||     |||||       
seq2  TCG--ATAAAATCTTGCTAGTGTATGCAATGGT-----GTCAG-------  249

seq1  TAGAGTGAGAAGTGGTACAATTAATCTAATCCAGGGAAAGGAAACAAACC  395
                                                        
seq2  --------------------------------------------------  249

seq1  AGGGAGAGTTCTACTTAGGGGGTGGGTGGGAGATAAATACAGTAAGAGAA  445
                                                        
seq2  --------------------------------------------------  249

seq1  GGTAGAAGTTAAAACAATTTGAAAGCTGTCTGATAATGCTAGTGTATGCA  495
                                                        
seq2  --------------------------------------------------  249

seq1  ATGGTGTCAG  505
                
seq2  ----------  249

seq1: chr11_42989560_42990728
seq2: B6Ng01-158G22.g_68_1205

seq1  GAATTCACTATTAGCTAATGCGGTACCACAGAGTTTCCCCCAGTGTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTAGCTAATGCGGTACCACAGAGTTTCCCCCAGTGTATTG  50

seq1  AACAAAGATATAGATGAGAGTTGCAAGGGAGGAGAACACTGCGCAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGATATAGATGAGAGTTGCAAGGGAGGAGAACACTGCGCAGAAAA  100

seq1  ATAAGACCAAAGATAATAGTAAACATGTTTTAAATTCTGTATCCTGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACCAAAGATAATAGTAAACATGTTTTAAATTCTGTATCCTGTAGG  150

seq1  ACTTCTCTGATCCTTTAATAAGCCCTAAGGAGACGAAGGAATGTGTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTGATCCTTTAATAAGCCCTAAGGAGACGAAGGAATGTGTAGCT  200

seq1  TCCTAAATATTTCAGCACAGAAATCTTTTATTCCAAGGAACAGATCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATATTTCAGCACAGAAATCTTTTATTCCAAGGAACAGATCCCAT  250

seq1  AACTGACATTTTGGAAGGATGGGATCACTACTTAAAGACTTGCTGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACATTTTGGAAGGATGGGATCACTACTTAAAGACTTGCTGCAGAT  300

seq1  ACACAGTGAGCACTCAGAATGCACCATCACTGTCCCTCGGGAGCTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGAGCACTCAGAATGCACCATCACTGTCCCTCGGGAGCTTTCCC  350

seq1  AAACACCCCTACCCTTTCCCATGCCACAGTGCAACAATGCCCTAAGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCCTACCCTTTCCCATGCCACAGTGCAACAATGCCCTAAGTAGG  400

seq1  AATACCTTGAAAATGTTCCCCCACATATTCTTGACATAAACTCACTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTGAAAATGTTCCCCCACATATTCTTGACATAAACTCACTGACA  450

seq1  ACGTCTTGAAAACTGAAACAACGGAAAGGTACCATTCTGGTGGAAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTTGAAAACTGAAACAACGGAAAGGTACCATTCTGGTGGAAAAAAC  500

seq1  AAACAAACTCATCATAATAAGAACAAGCAGTAAATTGCCATCCCTCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTCATCATAATAAGAACAAGCAGTAAATTGCCATCCCTCCAGG  550

seq1  TTCCTTTTACTACATGGCCACCCTTCTGAACACATCATCTTTTGGGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTACTACATGGCCACCCTTCTGAACACATCATCTTTTGGGTCCA  600

seq1  TACCTCACCCTGTAAGGTAGGCATTGCTAACCTCTTCTGAGAGATGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACCCTGTAAGGTAGGCATTGCTAACCTCTTCTGAGAGATGAAAA  650

seq1  TTCTGGGGAACAGTAAAGACAGATCTCACTATTGTCTCAGAAGTTGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGAACAGTAAAGACAGATCTCACTATTGTCTCAGAAGTTGTAAA  700

seq1  CACCTCCTAATATGATTTGATTTCTGTAGAAACTTAACAGTCTTGAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTAATATGATTTGATTTCTGTAGAAACTTAACAGTCTTGAATAA  750

seq1  TGAGTTTCAATGGCTTTTTGTTAACTTGTTTTTTTTTTTCTCTACATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCAATGGCTTTTTGTTAACTTGTTTTTTTTTTTCTCTACATTTC  800

seq1  TATTTTCTATGAGACCCTCATTCTTCCCAAAGGACTTTTACAAACCTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTATGAGACCCTCATTCTTCCCAAAGGACTTTTACAAACCTCAG  850

seq1  ACATTGCTAGAAGTCCCTACCTCAAATCTTATTTACATTACTCAGAAATG  900
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  ACATTGCTAGAAGTCCCTACCTCAAAT-TTAATTACATTACTCAGAAATG  899

seq1  GTGAGAAATTGAAGTTGGCTTCTTTGGACAAGCATTTCCCAAAGCAGAAT  950
      ||||| |||||||||||||||| |||||||||||||||||||||||| ||
seq2  GTGAGGAATTGAAGTTGGCTTC-TTGGACAAGCATTTCCCAAAGCAG-AT  947

seq1  AAACCCAACACAGTCCCTAGCTCTTGAAAATTATGGTTCATGGTCAAGTC  1000
      |||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAACTCAACACAGTCCCTAGCTCTTGAAAA-TATGGTTCATGGTCAAGTC  996

seq1  AAACTAATAAGCTAGAACCCCATAGATATCTTCATGAAGGGTTCAATGTA  1050
       |||||   |||||| ||| |||||||||| |||||| ||  ||||||||
seq2  -AACTA--TAGCTAG-ACCTCATAGATATC-TCATGACGG--TCAATGTA  1039

seq1  CAATATATTAAGGTGCCTGAGAACATTTTTTAAAACAAGTACTCATTTAC  1100
      ||  ||||||||||| |||||||||||||   |||| |||||||| ||||
seq2  CA--ATATTAAGGTG-CTGAGAACATTTT---AAAC-AGTACTCA-TTAC  1081

seq1  ATTCCTATAAAACTTTAGAGAAGGGGACATTTTCCTGGATTTGATACAGA  1150
      |||| |   |||||| |||||  ||||    ||||||||  |||||||  
seq2  ATTCAT---AAACTTAAGAGA--GGGA---ATTCCTGGA--TGATACAAC  1121

seq1  CATAATCATGACAGGTGAA  1169
       || ||  |||||||||||
seq2  TATCAT--TGACAGGTGAA  1138