BAC Information

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BAC

Clone NameB6Ng01-158L22
Chromosome11 (Build37)
Map Location 74,392,367 - 74,393,375
singlet/doubletsinglet
Overlap geneGarnl4
Upstream geneOlfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412
Downstream geneE130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158L22.bB6Ng01-158L22.g
ACCDH952614DH952615
length1,1961,003
definitionDH952614|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L22, 5' end.DH952615|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccttagattaattaaaatgtttttctcttagtaatttttatg
atttggatttaaatatagaataattaaaattgttagcatcaatttcagat
tataaatccctgaactttctcctttccccccctcatttcctgaccttgaa
aacctgagtttattcatttacttagctagaggtttcaagtcagactaagt
tttgcaggaaataataaaaagaaaatgatgtattcctgtgctactctgtg
caccggtgggccacctggctccagcagggcgttctcgtctcagcactctc
tggcccagggctctcaagatgtctctacctgactcagtaatttcccttgg
cgggccattgtcatgccaaccccatgcaatcatcgcccaccttggggtta
gatatcacaatacccagtaacatggtaaaatcaaaactcttgaagcttat
aattaactagtcatatatatatataacaataagttctcaattcacaagat
gcccacccaataatttcagggccaattgataatgatacaagctgcccacc
ttcattagacaatctactcctattattttatcccaatgtgaaattatatg
tacctgtggctatttaaagccatgctgaatctgaatcatcttgtttgttg
gcctccatcttgcttcctcttctctcttccaagtccgccctctgtccctg
caactcttagctccacctcccttttccctgtccaatcacaggcctcctgc
ttcagtaatatttaaattaactggacagggaaaatcctgctacagctaag
tttgtaaatatatttttttttggctttgtataactaaaaagtttttaggg
gaaaggatagatggctcagtggttaagagcactgatagctcttccagagg
tcctgagttcaactcccagcaacacatggcggctcacaccgatgctctct
ctgatctgtctgagagagtaaaagtgtactcatgtacataaaataaaata
atctagaaaaaaaaaaaaatcctgagttaaaaagaaggctggaagatggc
tcaagctgaatactgacttgctctttcgagtctgaattcaattccagaac
actgtgctcccacacttaatgggatcagcctctcgggtgtccgaacgcta
gtagtattcgattgatacgagtttttaaagcgttcaccgacttgat
gaattctggaaacttccatggtaagtactttatctactgagccatctgtc
tggctcttgctctgttttttgaaactgggtctttgactatcactcaaact
ggtctggaattgacagcaatcctactgcctcagtcccctgactgctagga
tcacaaagatgaggagagggaggaagaggttgtcgttatgaatagggtat
tttttttcaagcctcttgaattcaagttttagagttcaaatgatcactga
ccctggtgctggttccaacctttctaaaggagtctgtcttcacaaagaag
aggtaggaccaggatccctcatgcctcgactccaagtggtactgtcatct
ggtcttcttagataagaaaatataaaggagcctggaacataggttttcta
gaaggaatttgaaattatgaatacaaatcctttaaaaaaaaaactgtaca
tgccaagcacagtgtggtgctagagacctacaatcacagctgctagagag
gctgaggcaggaggattgcttaaatcaggagttcaaggactaacctgggc
aacatactaaaatctcaaatcaaaaaaaaaggaagctactgggtgtggta
actttttccaggtgtccattacataaaatatacacctttaatctcagcac
tcgagagtctgaggcaggaggatttctgtatgttcaagaccagtctagta
taagtagcaagttctaggccagccagaactatatagtgagaatcagtctc
gaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagaga
gagagagagaggcagacagacagacaaaacatggcactgggacttgtaaa
caccagttagtatcccggtttgttgtctggatgctggctttataagtgta
tgctgaattggtagaactatccaggtgtaggcttaaaaagtgtgcactgc
tatggagtatatgtgcttcaatagaaagtttctcttttttttttttcaaa
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74392367_74393375
seq2: B6Ng01-158L22.g_69_1071

seq1  GAATTCTGGAAACTTCCATGGTAAGTACTTTATCTACTGAGCCATCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAAACTTCCATGGTAAGTACTTTATCTACTGAGCCATCTGTC  50

seq1  TGGCTCTTGCTCTGTTTTTTGAAACTGGGTCTTTGACTATCACTCAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTGCTCTGTTTTTTGAAACTGGGTCTTTGACTATCACTCAAACT  100

seq1  GGTCTGGAATTGACAGCAATCCTACTGCCTCAGTCCCCTGACTGCTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGAATTGACAGCAATCCTACTGCCTCAGTCCCCTGACTGCTAGGA  150

seq1  TCACAAAGATGAGGAGAGGGAGGAAGAGGTTGTCGTTATGAATAGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGATGAGGAGAGGGAGGAAGAGGTTGTCGTTATGAATAGGGTAT  200

seq1  TTTTTTTCAAGCCTCTTGAATTCAAGTTTTAGAGTTCAAATGATCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAAGCCTCTTGAATTCAAGTTTTAGAGTTCAAATGATCACTGA  250

seq1  CCCTGGTGCTGGTTCCAACCTTTCTAAAGGAGTCTGTCTTCACAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTGCTGGTTCCAACCTTTCTAAAGGAGTCTGTCTTCACAAAGAAG  300

seq1  AGGTAGGACCAGGATCCCTCATGCCTCGACTCCAAGTGGTACTGTCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGACCAGGATCCCTCATGCCTCGACTCCAAGTGGTACTGTCATCT  350

seq1  GGTCTTCTTAGATAAGAAAATATAAAGGAGCCTGGAACATAGGTTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCTTAGATAAGAAAATATAAAGGAGCCTGGAACATAGGTTTTCTA  400

seq1  GAAGGAATTTGAAATTATGAATACAAATCCTTTAAAAAAAAAACTGTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATTTGAAATTATGAATACAAATCCTTTAAAAAAAAAACTGTACA  450

seq1  TGCCAAGCACAGTGTGGTGCTAGAGACCTACAATCACAGCTGCTAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCACAGTGTGGTGCTAGAGACCTACAATCACAGCTGCTAGAGAG  500

seq1  GCTGAGGCAGGAGGATTGCTTAAATCAGGAGTTCAAGGACTAACCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCAGGAGGATTGCTTAAATCAGGAGTTCAAGGACTAACCTGGGC  550

seq1  AACATACTAAAATCTCAAATCAAAAAAAAAGGAAGCTACTGGGTGTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTAAAATCTCAAATCAAAAAAAAAGGAAGCTACTGGGTGTGGTA  600

seq1  ACTTTTTCCAGGTGTCCATTACATAAAATATACACCTTTAATCTCAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCCAGGTGTCCATTACATAAAATATACACCTTTAATCTCAGCAC  650

seq1  TCGAGAGTCTGAGGCAGGAGGATTTCTGTATGTTCAAGACCAGTCTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAGTCTGAGGCAGGAGGATTTCTGTATGTTCAAGACCAGTCTAGTA  700

seq1  TAAGTAGCAAGTTCTAGGCCAGCCAGAACTATATAGTGAGAATCAGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGCAAGTTCTAGGCCAGCCAGAACTATATAGTGAGAATCAGTCTC  750

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA  800

seq1  GAGAGAGAGAGGCAGACAGACAGACAAAACATGGCACTGGGACTTGTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGAGAGAGAGGCAGACAGACAGACAAAACATGGCACTGGGACTTGT-AA  849

seq1  ACACCAGTTAGTATCCCGGTTTGGTGTCTGGATGCTGGCTTTATAAGTGT  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACCAGTTAGTATCCCGGTTTGTTGTCTGGATGCTGGCTTTATAAGTGT  899

seq1  ATGCTGAATTGGTAGGAACTTATCCAGGTGTAGGCTTAAAAAGTGTGCAC  950
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  ATGCTGAATTGGTA-GAAC-TATCCAGGTGTAGGCTTAAAAAGTGTGCAC  947

seq1  TGCTATGGAGGTATATTGTGCTTCAATAGAAAGTTTTCTCTTTTTTTTTT  1000
      ||||||||| ||||| ||||||||||||||||| ||||||||||||||||
seq2  TGCTATGGA-GTATA-TGTGCTTCAATAGAAAG-TTTCTCTTTTTTTTTT  994

seq1  TTCAAAATA  1009
      |||||||||
seq2  TTCAAAATA  1003