BAC Information

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BAC

Clone NameB6Ng01-159M18
Chromosome11 (Build37)
Map Location 8,147,920 - 8,148,966
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC665380, Tns3, LOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159M18.bB6Ng01-159M18.g
ACCDH953353DH953354
length1,0461,105
definitionDH953353|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M18, 5' end.DH953354|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcagtcaaataaatggatcacacatgggaagggacagtggctg
ggaacacgacagtcaggcaaggacagtgggtcatccaaatgagcaaactc
ctgttggggcattctggaagatctaagctttccagtgaaaacactggagg
tttcagccaggagattaacaagttcttcttacttagaatttcctagaagt
ataaattcattatctaaactggtaaactgaatcaggggaaatgacccatt
gtccctaaacagtgaggcctgcctaggatcctctagccccacagtaacct
ctcactagccacaggtccacacctgtgtcctgggctcctgctgtgcagct
aaagctgatgatggaggtatttgaaaatcttgaccttaagcaaaccaatg
aagattcaggtgagggaaggggcttactcaaggtcactcagctactatcg
gtttgatagattttgccttagtgctccaagaaaggatttcagccaccttc
ccctgtgtggcctgtctgtctgacacatttgccctttcctagcctggggt
tgtggtgttttaactctgcttcatttggactttcgtactcaccgtaaaag
cccttttctgttttcacaaattcacatggcagggctttacttggaatgtt
ctatactttaaaatggaaacatctgataaaaactgtcctttgatggttac
ttctgaaagtgctgacctgccagaactcacaaagcacatgtagccagaaa
actcttaacagaaagcctagtcacatcctgacatttgagtgactgtgtcc
ctcgggtgtgcacgtgtctagaagcatttcttcttataactgtactatct
gaatccgtgggaatgaatgtaatgtgtcttgcaagtatctgggtgtatga
aatatatgatatctgtgatgtacaggagtggtgcatgtgtgtgtacatga
gtacattgttcatatgtgtgggtaatgtgtatgtccacactgtcaccact
cagaaataacccctaacttctcacttatgctcagatgtgagcagag
gaattctccactaaacccatctggtcttggccttttttctgttgggagac
tattaatgactgcttctatttcttttaggggttatgcgactgtttagatg
gtttatctgatcctgatttaactttggtatttggtatctgtctagaaaat
tgtccatttcatccacattttccagttgtgttgagtataggcttttgtag
taggatctgatgatttttggaatttccacggtttctgttattatgtctcc
ctttttatttctgattttattaatttggatactgtttctgtgccttctgg
tttgtctggctaagggtttatctgtcttgttgattttctcaaagaacctg
ctcctggtttggttgattctttgtatagttctttttgtttctatttgatt
gacttcagccctggatgccctgagtttgattatttctgattattatctac
tcctcttggatgtatttgcttctttttgttctagagctttcaggtgtgct
gtcaagctgctagtgtaagttctctccagtttctttttggaggcacttag
agctataagttttcctcttaccactgttttcattgtgtcccataagtttt
ggtatgatgtgtcttcattttcattaaattctaaaacgtctttaattttt
ttaatttcttccttgaacaagttattactgagtagagcattgttcagatt
ccaggtgtatgtgggttttctgttgtttttgtggaatttaagaccaactt
tagtctgtagtgttcataggatcatttccatcttcttgtatctgttgagg
actgttttgtgaccaattatatggttagttttgagaaggtaccatgagtg
ctgagaagaaggtatattcttttgctttagatgaaatattctataagtat
ctgttagatccatttggtcataatgtctgttagttcactgtgttcttgtt
tagtttctgtttgtatgatttgtcacttgctgaagagtagagtggtgaag
tctcccccattattgggtggggggtgaatatggcgcttgacctgggaaag
atccctttttgaaagggggtctcctcctctgaacaaaaaggtcgaaaaat
gagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_8147920_8148966
seq2: B6Ng01-159M18.b_46_1091

seq1  GAATTCTGCAGTCAAATAAATGGATCACACATGGGAAGGGACAGTGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGTCAAATAAATGGATCACACATGGGAAGGGACAGTGGCTG  50

seq1  GGAACACGACAGTCAGGCAAGGACAGTGGGTCATCCAAATGAGCAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACGACAGTCAGGCAAGGACAGTGGGTCATCCAAATGAGCAAACTC  100

seq1  CTGTTGGGGCATTCTGGAAGATCTAAGCTTTCCAGTGAAAACACTGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGGGCATTCTGGAAGATCTAAGCTTTCCAGTGAAAACACTGGAGG  150

seq1  TTTCAGCCAGGAGATTAACAAGTTCTTCTTACTTAGAATTTCCTAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCAGGAGATTAACAAGTTCTTCTTACTTAGAATTTCCTAGAAGT  200

seq1  ATAAATTCATTATCTAAACTGGTAAACTGAATCAGGGGAAATGACCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCATTATCTAAACTGGTAAACTGAATCAGGGGAAATGACCCATT  250

seq1  GTCCCTAAACAGTGAGGCCTGCCTAGGATCCTCTAGCCCCACAGTAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTAAACAGTGAGGCCTGCCTAGGATCCTCTAGCCCCACAGTAACCT  300

seq1  CTCACTAGCCACAGGTCCACACCTGTGTCCTGGGCTCCTGCTGTGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAGCCACAGGTCCACACCTGTGTCCTGGGCTCCTGCTGTGCAGCT  350

seq1  AAAGCTGATGATGGAGGTATTTGAAAATCTTGACCTTAAGCAAACCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGATGATGGAGGTATTTGAAAATCTTGACCTTAAGCAAACCAATG  400

seq1  AAGATTCAGGTGAGGGAAGGGGCTTACTCAAGGTCACTCAGCTACTATCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAGGTGAGGGAAGGGGCTTACTCAAGGTCACTCAGCTACTATCG  450

seq1  GTTTGATAGATTTTGCCTTAGTGCTCCAAGAAAGGATTTCAGCCACCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATAGATTTTGCCTTAGTGCTCCAAGAAAGGATTTCAGCCACCTTC  500

seq1  CCCTGTGTGGCCTGTCTGTCTGACACATTTGCCCTTTCCTAGCCTGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTGGCCTGTCTGTCTGACACATTTGCCCTTTCCTAGCCTGGGGT  550

seq1  TGTGGTGTTTTAACTCTGCTTCATTTGGACTTTCGTACTCACCGTAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTTTTAACTCTGCTTCATTTGGACTTTCGTACTCACCGTAAAAG  600

seq1  CCCTTTTCTGTTTTCACAAATTCACATGGCAGGGCTTTACTTGGAATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCTGTTTTCACAAATTCACATGGCAGGGCTTTACTTGGAATGTT  650

seq1  CTATACTTTAAAATGGAAACATCTGATAAAAACTGTCCTTTGATGGTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTTAAAATGGAAACATCTGATAAAAACTGTCCTTTGATGGTTAC  700

seq1  TTCTGAAAGTGCTGACCTGCCAGAACTCACAAAGCACATGTAGCCAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGTGCTGACCTGCCAGAACTCACAAAGCACATGTAGCCAGAAA  750

seq1  ACTCTTAACAGAAAGCCTAGTCACATCCTGACATTTGAGTGACTGTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAACAGAAAGCCTAGTCACATCCTGACATTTGAGTGACTGTGTCC  800

seq1  CTCGGGTGTGCACGTGTCTAGAAGCATTTC-TCTTATAACTGTACTATCT  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCGGGTGTGCACGTGTCTAGAAGCATTTCTTCTTATAACTGTACTATCT  850

seq1  GAATCCGTGGGAATGAATGTAATGTGTCTTGCAAGTATCT-GGTGTATGA  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAATCCGTGGGAATGAATGTAATGTGTCTTGCAAGTATCTGGGTGTATGA  900

seq1  GAATATATGATATCTGTGAGTGTACAGGAGT-GTGCATGTGTGTGTACAT  947
       |||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  -AATATATGATATCTGTGA-TGTACAGGAGTGGTGCATGTGTGTGTACAT  948

seq1  GAGTACATTGTACATATGTGTGGGTAAATGTGTATGTCACACACTGTCAC  997
      ||||||||||| ||||||||||||| |||||||||||| |||||||||||
seq2  GAGTACATTGTTCATATGTGTGGGT-AATGTGTATGTC-CACACTGTCAC  996

seq1  AAACTCAGAAATATACCCTTAC-TCCCACATATGCCCAGATGTGAGCAGA  1046
        |||||||||||  |||| || || ||| ||||| ||||||||||||||
seq2  -CACTCAGAAATAACCCCTAACTTCTCACTTATGCTCAGATGTGAGCAGA  1045

seq1  G  1047
      |
seq2  G  1046