BAC Information

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BAC

Clone NameB6Ng01-159P03
Chromosome11 (Build37)
Map Location 26,273,946 - 26,274,895
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345
Downstream geneFancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159P03.bB6Ng01-159P03.g
ACCDH953460DH953461
length1,1681,165
definitionDH953460|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P03, 5' end.DH953461|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattatagttatgtatagcagactacattactttagaaggaag
gttgtggtctaagaaggaagtagagtaaatacttagaactataaatagct
gagtcactcccacacacaggcatttgcaatggcctagggtgaaggtggac
tatacaatagacttgaattggaactatggcaagggcatgaagcccttgcc
cctgggttctaagattaagctgactttatgtggggctgcttttgctccca
gttgttaacactgattttatcccagttggttccggctagcttttaagtac
acattcctctgttttgttgtaaaagtatatataagacttatgctcacttt
gacattacattcagaaacagcacactccctcgtgtccctatctgtttgcc
atccaagccaactctttgctggcctgtaacaggaaccctgatttctccca
cagtttgagagaggccaactgaggccagtccacggcattagtccattttt
gtcattgcaggaaacattgcactatgcaggcataagtgattagtagagag
tagctgagtgctctacatcttgatcagcaggcagcagaaggagaccgtga
aacacaagccagatttgaatttataatacctcaaagctcaccctgcagtg
acacacttcctcctaaggccacacttcctaatagtgccactccctatagg
cagagcattcatatacacaagtctatgggggccattcctattcaaaccac
cacagtcagaaaagcataaaagtatgtagtttagaccttgaaaataagta
actgtccactcagatcaccaaacctagaagttatctttttaaattgatgg
gaaaagaaaaaaactttcaaacaaggataaactaagctatcttatgacaa
caaacaaacattgcaaacacaaacaaacaaacccaaaatttacacgatgc
tatttacagaagagatgaagtactgttgtatattcatgagtacagggaaa
gaatagtctgatagagaaaagccagaagaaagctaggacagatgattgct
aaagatcaacattagatcaacacattcttacggaatggacatatacctca
atcaaatgaatagtgagatatcaggtcggcgagctagacttttctagaga
gcctcacctacctggcct
gaattctaggaacaagcctactagtggaggagaaatacctctacagtgaa
aatgatcagagactgaagaaagaaagaggaggagacagtaaaaaaactga
acaccttgcatgtgcatgggttgccagaattagtgtggtggaaatggtta
tatcactaaatatgatatttaggttcagtaccccctcccccatcaaagtt
atagtacatctttaaaattagaactagaaaaaaaaaactttaaaatacac
ataggaccacaaaacaccgaaacaaccaaagcagttccaagcagaaaatg
ctagtggtagcagaatacttgatcacaaactgtcctatgatcagtgacaa
tgaaaggtgaggcactggcacagaaagagacttacagacctgtgaactag
agcagaagccagaattaaacatacacacagatacccttcctaacttaagt
gtcaaaaagacacactgggacaatgcctgcttgtcagtggttctgggatt
gctggctatccacacttgtaaaaaactgacattttaatatagttcctcat
gttgtggtaatccccaaccttaaaatcattcttgttgctttttcatactt
gtcattttgcttctgttatgaattatcatgtaactatctgatatgtagta
tacctgatatgtgacccctgtgaaatggttgattgacaccccccccccca
aaagtgtcacaacctacaggttgagaacttctgtgtctgtcattatgcat
aaaaatcaatctgaaatacatcaaggccttaatttaagaccaaagaccct
gaactgttggagcaaatattccaaagcagaggcataggctaggactccta
taactcacagagatttcctaagttgactgggaaaggttgttttagtttat
tttctgttgctgtgataacatattatcagggcacttatagtgaaagacta
ttttactatggtctggaggctagagtcatatagcagacagcatgatatat
gatagtaagcatcagcatggtgatgggatgagcagagcttaagccgcatc
tggacataggccaaagcacgaagagatcagagatcagctgagcttcttcc
aagcacccttatgaatctacgaggtacttctgactgctcgagcaagtaca
tcgatcctgggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26273946_26274895
seq2: B6Ng01-159P03.b_302_1215

seq1  TTAACACTGATTTTATCCCAGTTGGTTCCGGCTAGCTTTTAAGTACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTGATTTTATCCCAGTTGGTTCCGGCTAGCTTTTAAGTACACAT  50

seq1  TCCTCTGTTTTGTTGTAAAAGTATATATAAGACTTATGCTCACTTTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTTTTGTTGTAAAAGTATATATAAGACTTATGCTCACTTTGACA  100

seq1  TTACATTCAGAAACAGCACACTCCCTCGTGTCCCTATCTGTTTGCCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCAGAAACAGCACACTCCCTCGTGTCCCTATCTGTTTGCCATCC  150

seq1  AAGCCAACTCTTTGCTGGCCTGTAACAGGAACCCTGATTTCTCCCACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACTCTTTGCTGGCCTGTAACAGGAACCCTGATTTCTCCCACAGT  200

seq1  TTGAGAGAGGCCAACTGAGGCCAGTCCACGGCATTAGTCCATTTTTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGAGGCCAACTGAGGCCAGTCCACGGCATTAGTCCATTTTTGTCA  250

seq1  TTGCAGGAAACATTGCACTATGCAGGCATAAGTGATTAGTAGAGAGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGAAACATTGCACTATGCAGGCATAAGTGATTAGTAGAGAGTAGC  300

seq1  TGAGTGCTCTACATCTTGATCAGCAGGCAGCAGAAGGAGACCGTGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTCTACATCTTGATCAGCAGGCAGCAGAAGGAGACCGTGAAACA  350

seq1  CAAGCCAGATTTGAATTTATAATACCTCAAAGCTCACCCTGCAGTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGATTTGAATTTATAATACCTCAAAGCTCACCCTGCAGTGACAC  400

seq1  ACTTCCTCCTAAGGCCACACTTCCTAATAGTGCCACTCCCTATAGGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCCTAAGGCCACACTTCCTAATAGTGCCACTCCCTATAGGCAGA  450

seq1  GCATTCATATACACAAGTCTATGGGGGCCATTCCTATTCAAACCACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCATATACACAAGTCTATGGGGGCCATTCCTATTCAAACCACCACA  500

seq1  GTCAGAAAAGCATAAAAGTATGTAGTTTAGACCTTGAAAATAAGTAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAAGCATAAAAGTATGTAGTTTAGACCTTGAAAATAAGTAACTG  550

seq1  TCCACTCAGATCACCAAACCTAGAAGTTATCTTTTTAAATTGATGGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCACTCAGATCACCAAACCTAGAAGTTATCTTTTTAAATTGATGGG-AA  599

seq1  AAGAAAAAAACTTTCAAAACAAGGATAAACTAAGCTATCTTATGACAACA  650
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  AAGAAAAAAACTTTC-AAACAAGGATAAACTAAGCTATCTTATGACAAC-  647

seq1  AAACAAACATTGCAAACACAAACAAACAAAACCCAAAAATTTACAAGGAT  700
      ||||||||||||||||||||||||||||||  || ||||||||| | |||
seq2  AAACAAACATTGCAAACACAAACAAACAAA--CCCAAAATTTAC-ACGAT  694

seq1  GCTATTTACAGAAGAAGATGAAGTACTGTTGTATATTCATGAGTACAGGG  750
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  GCTATTTACAGAAG-AGATGAAGTACTGTTGTATATTCATGAGTACA-GG  742

seq1  GAAAGAATAAGTCTGATAAGAGGAAAAGGCCAAGAAAGGAAAGCTAGGAC  800
      |||||||| |||||||| ||| ||||||  | ||||  ||||||||||||
seq2  GAAAGAAT-AGTCTGAT-AGA-GAAAAG--CCAGAA--GAAAGCTAGGAC  785

seq1  AGAATGAATGGCTAAAAGATCAAACATTTTAGATCAACACATTCTTTACA  850
      || ||| || ||| ||||||| ||||  |||||||||||||||| |||| 
seq2  AG-ATG-ATTGCT-AAAGATC-AACA--TTAGATCAACACATTC-TTACG  828

seq1  GTATTGACAATATTACTCAAATCAAATGAATTAGTTGAAGATTAATCAAG  900
      | || ||| ||||  ||| ||||||||||| ||||   ||||  |||| |
seq2  GAATGGAC-ATATACCTC-AATCAAATGAA-TAGT--GAGAT--ATCAGG  871

seq1  TACAGCCAAAGCTAAGACTATTCTTAGGAAGAGGCTCACCTACCTGGCCT  950
      | | ||   |||| ||||| ||| |||  |||| ||||||||||||||||
seq2  T-CGGC--GAGCT-AGACTTTTC-TAG--AGAGCCTCACCTACCTGGCCT  914