BAC Information

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BAC

Clone NameB6Ng01-160F14
Chromosome11 (Build37)
Map Location 90,732,407 - 90,733,518
singlet/doubletsinglet
Overlap genenone
Upstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1, LOC638903
Downstream geneEG664976, Kif2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160F14.bB6Ng01-160F14.g
ACCDH953747DH953748
length4291,098
definitionDH953747|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F14, 5' end.DH953748|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actggactgctttaggagtgcaaggaccacactttgacttttccacattc
atatggttccacattcatgctcctgcaggttcaaagctgtggtttctgaa
tggcaacattagaaatttaaattcaaatacaattaaatgtggagttatgc
aagcctctctctctctctctctctctctctctctctctctctctctctct
ctctgtatcaaacacacacacacacacacacatatatatatatatatata
tttttctcttttttttttacatatatatagagagatagaagaggtggggg
ggtgtctctctgtgtcagtatgctttttctcactgtaactctcttatttt
tacatctgaatatgtatctttttctctattatataattagttatatatct
ttgtatggagggtgaacacgtcacgcacg

gaattcaatgctttgtatgttaacttaaaattaatcaaaaaaatcaataa
agcataagtgcaaactttagatggtgataggaggtattagtgaagcaagt
ttccagtaaatgtattatattgactagaacaaacatttatttattgaaat
aaagtgtttatatgtgaactaacaccctgttctataacactgcatacaat
aaactttaaaaaagaaaacagaccagaatactttgaggctcagctctttc
agctcctaaattctggattatagacctatatggcttgcttacgtgttttt
atttgaaggaatatgaagataccttatttaatactatttttaaattctag
gtatgaatgtcacattgttgataagcttttcataagcaatctccaaatac
tattttgctaaatcaactgaagactatttatctattcttttccagttgca
tttgtgtgactatatatggatctttctaatatatatgtttgatatgtatg
ttttaaagcacgtgctattgtttcttcttcttcttcttctttttttaaat
ttgttcttcattttatgtattggctcattattctccctctgctggtttct
acttagatcatctctttgaaggacaaaataaaaccaaacagcatcctcca
tattctataatcagatagcaaccaaatggttcattttctgattcatcata
gctcaggaaatgatttcaatgaagaagatgaagtagaaattccaaggatc
tttctattgtttgttgggttctaacaaagcatatgggattgtggttgccc
cagcaacagatccatctgttctagtttgtgcctttgtctttaatcatgca
tttgtacatacagaaagaagagagagagaaatgagagagagtgctcgata
gagtgagatcgctagttgtatacagattttctttccctgttttagtattt
caaatatattttaattttttactaccttatttgtatgcaattttgccaca
ttgaataatactgtggtcctctgaaataaatatagtataagtcatataat
tttaaaaaccaagaaatccaattccacattattctttgtagctaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_90732407_90733518
seq2: B6Ng01-160F14.g_68_1165

seq1  GAATTCAATGCTTTGTATGTTAACTTAAAATTAATCAAAAAAATCAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTTTGTATGTTAACTTAAAATTAATCAAAAAAATCAATAA  50

seq1  AGCATAAGTGCAAACTTTAGATGGTGATAGGAGGTATTAGTGAAGCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGTGCAAACTTTAGATGGTGATAGGAGGTATTAGTGAAGCAAGT  100

seq1  TTCCAGTAAATGTATTATATTGACTAGAACAAACATTTATTTATTGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTAAATGTATTATATTGACTAGAACAAACATTTATTTATTGAAAT  150

seq1  AAAGTGTTTATATGTGAACTAACACCCTGTTCTATAACACTGCATACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTATATGTGAACTAACACCCTGTTCTATAACACTGCATACAAT  200

seq1  AAACTTTAAAAAAGAAAACAGACCAGAATACTTTGAGGCTCAGCTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAAAAAAGAAAACAGACCAGAATACTTTGAGGCTCAGCTCTTTC  250

seq1  AGCTCCTAAATTCTGGATTATAGACCTATATGGCTTGCTTACGTGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTAAATTCTGGATTATAGACCTATATGGCTTGCTTACGTGTTTTT  300

seq1  ATTTGAAGGAATATGAAGATACCTTATTTAATACTATTTTTAAATTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGGAATATGAAGATACCTTATTTAATACTATTTTTAAATTCTAG  350

seq1  GTATGAATGTCACATTGTTGATAAGCTTTTCATAAGCAATCTCCAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATGTCACATTGTTGATAAGCTTTTCATAAGCAATCTCCAAATAC  400

seq1  TATTTTGCTAAATCAACTGAAGACTATTTATCTATTCTTTTCCAGTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCTAAATCAACTGAAGACTATTTATCTATTCTTTTCCAGTTGCA  450

seq1  TTTGTGTGACTATATATGGATCTTTCTAATATATATGTTTGATATGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGACTATATATGGATCTTTCTAATATATATGTTTGATATGTATG  500

seq1  TTTTAAAGCACGTGCTATTGTTTCTTCTTCTTCTTCTTCTTTTTTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCACGTGCTATTGTTTCTTCTTCTTCTTCTTCTTTTTTTAAAT  550

seq1  TTGTTCTTCATTTTATGTATTGGCTCATTATTCTCCCTCTGCTGGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTCATTTTATGTATTGGCTCATTATTCTCCCTCTGCTGGTTTCT  600

seq1  ACTTAGATCATCTCTTTGAAGGACAAAATAAAACCAAACAGCATCCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGATCATCTCTTTGAAGGACAAAATAAAACCAAACAGCATCCTCCA  650

seq1  TATTCTATAATCAGATAGCAACCAAATGGTTCATTTTCTGATTCATCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATAATCAGATAGCAACCAAATGGTTCATTTTCTGATTCATCATA  700

seq1  GCTCAGGAAATGATTTCAATGAAGAAGATGAAGTAGAAATTCCAAGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGAAATGATTTCAATGAAGAAGATGAAGTAGAAATTCCAAGGATC  750

seq1  TTTCTATTGTTTGTTGGGTTCTAACAAAGCATATGGGATTGTGGTTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGTTTGTTGGGTTCTAACAAAGCATATGGGATTGTGGTTGCCC  800

seq1  CAGCAACAGATCCATCTGTTCTAGTTTGTGCCTTTGTCTTTAATCATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACAGATCCATCTGTTCTAGTTTGTGCCTTTGTCTTTAATCATGCA  850

seq1  TTTGTACATACAGAAAGAAGAGAGAGAGAAATGAGAGAGAGTGCTCGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATACAGAAAGAAGAGAGAGAGAAATGAGAGAGAGTGCTCGATA  900

seq1  GAGTGAGATCGCTAGTTGTATACAGATTTTCTTTCCCTGTTTTAGTATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGATCGCTAGTTGTATACAGATTTTCTTTCCCTGTTTTAGTATTT  950

seq1  CAAATATATTTTAATTTTTTTACTACCTTATTTGTATTGGCAATCTTGCC  1000
      |||||||||||||| ||||||||||||||||||||||  ||||| |||||
seq2  CAAATATATTTTAA-TTTTTTACTACCTTATTTGTAT--GCAATTTTGCC  997

seq1  ACATTGTATAATTACTGTGGT-CTCTGAAAATAAAATATTAAGTATAAGT  1049
      |||||| |||| ||||||||| ||||||||   ||||||  |||||||||
seq2  ACATTGAATAA-TACTGTGGTCCTCTGAAA--TAAATAT--AGTATAAGT  1042

seq1  ACAAATATAATTATAAAAACACAGAAATCACAATCCACATTATAATTCTT  1099
          |||||||| |||||||  |||||||  | ||||||||   ||||||
seq2  ---CATATAATTTTAAAAACCAAGAAATCCAATTCCACATT---ATTCTT  1086

seq1  TGTAGGCTAATTG  1112
      |||| ||||||||
seq2  TGTA-GCTAATTG  1098


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