BAC Information

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BAC

Clone NameB6Ng01-162B24
Chromosome11 (Build37)
Map Location 41,074,073 - 41,074,452
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256
Downstream geneLOC100039285, Hspd1, LOC100039292, Gabrg2, Gabra1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162B24.bB6Ng01-162B24.g
ACCDH955042DH955043
length3701,164
definitionDH955042|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B24, 5' end.DH955043|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
attagtttttttgctttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtaatagtgtggatcaattcatgtgttttc
acataataaccagaacatgggtgtgagttttcatgcatgcatgaagaagc
cagagttcaatgtattgtctatctgctcaacttgttctggagaactcctg
tttcctccccgcacaattaagattatattccagccaccacttccatctga
catttgcacggctgctggggagcccaactgagatttttactgcaaagcct
tgccttccaccactatccctgcttcctccgctttctaattttgtgctttt
ttctgattgtttgactcata
gaattctcacctgaggaatactgaatggcagagacgcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactgtggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaaccgaggaatggatacagaaaatgtggtacatctacactgga
gtactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaagg
aactcatacaatatgtactcactgataagtggatactagcccaaaaccta
ggatacccacgatataagatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacacccatggaaggagttacagaaacaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaacgctgacaccattgcatatactagcaagatttttatcgaaag
gacccagatgtagctgtctcttgtgagactatgtcggggcctagcaaaca
cagaagtggatgctcacagtcagcttatggatggatcacgggctcccaat
ggaggagctagataaagtacccaaggagctaaagggatcttcaccctatt
agttggaacacattatgaactaccagtaacccctgagctcttgactctag
ctgcaatgtatcaaagatgcctatccggcatcactggaaagagagtccca
ttggactcctaactttgtgtccggtacatggactgctaggtctaagtggg
tggatagtggtcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_41074073_41074452
seq2: B6Ng01-162B24.b_45_420 (reverse)

seq1  TATGAGTCAACCAATCAGACACAAAGCACAACATTAGAAAGCGGAGGCTG  50
      |||||||||| |||||||| | ||||||||| |||||||||||||||  |
seq2  TATGAGTCAAACAATCAGA-AAAAAGCACAAAATTAGAAAGCGGAGGAAG  49

seq1  CAGGGATGGTGGTGGAAGGCCTGGCTTTGCAGTGTGAAGATCTCAGTTGG  100
      ||||||| ||||||||||||  |||||||||  || || |||||||||||
seq2  CAGGGATAGTGGTGGAAGGCAAGGCTTTGCA--GTAAAAATCTCAGTTGG  97

seq1  GCTCCCCAGCAGCCGTGCAAATGTCAGATGGATGTGGTGGCTGGAATATA  150
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTCCCCAGCAGCCGTGCAAATGTCAGATGGAAGTGGTGGCTGGAATATA  147

seq1  ATCCTAGCGTGTGCGGGGAGGAAACAGGAGTTCTCCAGAACAAGTTGAGC  200
      ||| ||   |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTA-ATTGTGCGGGGAGGAAACAGGAGTTCTCCAGAACAAGTTGAGC  196

seq1  AGATAGACAATACATCGAACTCTGGCTTCTTCATGCATGCATGAAAACTC  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGATAGACAATACATTGAACTCTGGCTTCTTCATGCATGCATGAAAACTC  246

seq1  ACACCCATGTTCAGGTTCTTATGTGAAAACACATGAATTGATCCACACTA  300
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  ACACCCATGTTCTGGTTATTATGTGAAAACACATGAATTGATCCACACTA  296

seq1  TTACACACACACACACACACACACACACACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACACACACACACACACACACACACACACACACACACACACACAC  346

seq1  ACACACCAAAGCAAAAAAACTAATGAATTC  380
      ||||||||||||||||||||||||||||||
seq2  ACACACCAAAGCAAAAAAACTAATGAATTC  376