BAC Information

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BAC

Clone NameB6Ng01-162P09
Chromosome11 (Build37)
Map Location 117,062,085 - 117,062,360
singlet/doubletsinglet
Overlap genenone
Upstream gene2310004N24Rik, Cdk3, Evpl, Srp68, Galr2, Exoc7, Foxj1, LOC668255, 1110014K08Rik, Qrich2, Prpsap1, LOC629971, Sphk1, Ube2o, Aanat, Rhbdf2, Cygb, OTTMUSG00000003947, 1810032O08Rik, St6galnac2, LOC634720, BC018473, St6galnac1, Mxra7, Jmjd6, 1110005A03Rik, LOC100043293, Sfrs2, Mfsd11, Mgat5b, LOC100042036, Sec14l1
Downstream geneSept9, EG667423, Tnrc6c, Tmc6, Tmc8, 6030468B19Rik, Syngr2, Tk1, Afmid, Birc5, LOC546519, Tha1, Socs3, Pgs1, Dnahc17, Pscd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162P09.g
ACCDH955666
length276
definitionDH955666|Mus musculus domesticus DNA, BAC clone: B6Ng01-162P09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atttaagataagaactctgaatcaggagactgagttagagttgaagaggt
catttgggccattctcctgcctcgaggtcttgttctgtttcctcttgctt
tccaaattcaggaaccaaaaatgactctacttcatctcaaagagagccat
ttagcttccctttaaaaaaaaatagccttccgcagcagaagctcgaagtt
gctaacttggctgctgggcccccgtcactggcggtttttcaggagaacat
gctgatgtgatggtgggggaggaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_117062085_117062360
seq2: B6Ng01-162P09.g_74_349

seq1  ATTTAAGATAAGAACTCTGAATCAGGAGACTGAGTTAGAGTTGAAGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGATAAGAACTCTGAATCAGGAGACTGAGTTAGAGTTGAAGAGGT  50

seq1  CATTTGGGCCATTCTCCTGCCTCGAGGTCTTGTTCTGTTTCCTCTTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGCCATTCTCCTGCCTCGAGGTCTTGTTCTGTTTCCTCTTGCTT  100

seq1  TCCAAATTCAGGAACCAAAAATGACTCTACTTCATCTCAAAGAGAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATTCAGGAACCAAAAATGACTCTACTTCATCTCAAAGAGAGCCAT  150

seq1  TTAGCTTCCCTTTAAAAAAAAATAGCCTTCCGCAGCAGAAGCTCGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCCCTTTAAAAAAAAATAGCCTTCCGCAGCAGAAGCTCGAAGTT  200

seq1  GCTAACTTGGCTGCTGGGCCCCCGTCACTGGCGGTTTTTCAGGAGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTTGGCTGCTGGGCCCCCGTCACTGGCGGTTTTTCAGGAGAACAT  250

seq1  GCTGATGTGATGGTGGGGGAGGAGGG  276
      ||||||||||||||||||||||||||
seq2  GCTGATGTGATGGTGGGGGAGGAGGG  276