BAC Information

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BAC

Clone NameB6Ng01-164H15
Chromosome11 (Build37)
Map Location 45,311,654 - 45,312,666
singlet/doubletsinglet
Overlap genenone
Upstream gene3732413I11Rik, Ebf1, LOC382510
Downstream geneLOC633082, Clint1, Lsm11, Thg1l, Sox30, LOC667037, LOC100039624, Adam19, 9530066K23Rik, Cyfip2, C030019I05Rik, LOC100038833, LOC100039577, Itk, OTTMUSG00000005491, Crsp9, LOC100039730, Havcr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164H15.bB6Ng01-164H15.g
ACCDH956791DH956792
length1,0131,154
definitionDH956791|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H15, 5' end.DH956792|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccaggagtgtgcccaaggagtcagcactcacctttacagctc
cctgagcccctcctgggcttgtatccatttaaggggggaaatcactttca
tcacttaagtagaaatgaatcaaagtgtggtgtagctaggcaagcagtca
gcttcccctgatagcttctgttaaagggagggaagggtgattcattccgg
atgtggtgttcttgaagcacgcatctggatcatcacttccagattttcct
aaatcccccaggcacagagaagtgttaggaagttcaggtgaggtgaagac
tctctagtagtctgaggcctttggctgtgtcagccaggacctccaagggc
aaactcacttgacctctaagccactactcagtgctgctggtggcaatgca
tccttataatcccaaagccattcctgaagagccatgtgcttccccattgt
caagaagcattctgaagtcaatggtaacagactagcctatgatctttggc
tctaatagttatcctgcttcatgctggccaggacttggaacaagggaaac
atctctgcattgttggtgtttgtgaaaacttgtataactactttggaaat
caatttgacaatttctcagacaactggtaagagttctatctcaagaccca
gctataccactcctgagaatatacccaaaagatgcttcaccatctcacaa
caacacttgtctaactatattcatggcagatttattcataatagccaaaa
actggaaacaacttagatgtccctcaactgaaaaatggataaagaaaatg
tggtacaccttcacaatggaatactattcagccattaaaaacaaagacat
catgaattttgaagaaaaatcgatgggatcttgagaatatcatccaaagt
gagttatcccagtctcaaaaggacatgtataatgtgtacttacttataag
tggatattagccataaagtacaggatacccatgctatactccacagaccc
aagaagctaaaca
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaatgcaaatcaaaacaaccctgagatt
ccatctcacaccagtcagaatggctatgatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactccttcattattggtgg
gattgcaagcttgtacaaccactctggatatcagtctggtggttcctcag
aaaattggacatagtactaccagaggatcctgcaatacctctcctgagca
tatatctagaagatgtcccaaatggtaagaaggacacatgctccactatg
ttcataacagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggttggacctggaaggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcaaatgatatgtactcactgataagtggatattagcccaaaaact
tagtatacccgaaatataagagataatttgtaaaacacatgaaaatgaag
aagaacgaagaccaaagtgtggacattttgccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
cggatggaccatctagagactgccatatccagggttccatcccataatta
gcctccaaacgatgtcaccattgcatacactagcaagcgtttgctgaaag
gaccctgatatagctgtctcttttgagactatgccggggcctagcaacac
ataagtggatgctcacagtcagctattggatggatcataggccccaatgt
agagctagaagaaagtaaccaaggagctaagagatctgcaccctgtaggt
gcaacaacatatgactaacagtaccccgagctcttgactctagctgttat
gtatcaaagatggcttagtagccatcactaaagagagccattgcctcgca
actttatgtcagtcaggacgccaggcaaaaatgtgattggtggtagggaa
gtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_45311654_45312666
seq2: B6Ng01-164H15.b_45_1057

seq1  GAATTCATCCAGGAGTGTGCCCAAGGAGTCAGCACTCACCTTTACAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCAGGAGTGTGCCCAAGGAGTCAGCACTCACCTTTACAGCTC  50

seq1  CCTGAGCCCCTCCTGGGCTTGTATCCATTTAAGGGGGGAAATCACTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCCCCTCCTGGGCTTGTATCCATTTAAGGGGGGAAATCACTTTCA  100

seq1  TCACTTAAGTAGAAATGAATCAAAGTGTGGTGTAGCTAGGCAAGCAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAGTAGAAATGAATCAAAGTGTGGTGTAGCTAGGCAAGCAGTCA  150

seq1  GCTTCCCCTGATAGCTTCTGTTAAAGGGAGGGAAGGGTGATTCATTCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCTGATAGCTTCTGTTAAAGGGAGGGAAGGGTGATTCATTCCGG  200

seq1  ATGTGGTGTTCTTGAAGCACGCATCTGGATCATCACTTCCAGATTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTGTTCTTGAAGCACGCATCTGGATCATCACTTCCAGATTTTCCT  250

seq1  AAATCCCCCAGGCACAGAGAAGTGTTAGGAAGTTCAGGTGAGGTGAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCCCAGGCACAGAGAAGTGTTAGGAAGTTCAGGTGAGGTGAAGAC  300

seq1  TCTCTAGTAGTCTGAGGCCTTTGGCTGTGTCAGCCAGGACCTCCAAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGTAGTCTGAGGCCTTTGGCTGTGTCAGCCAGGACCTCCAAGGGC  350

seq1  AAACTCACTTGACCTCTAAGCCACTACTCAGTGCTGCTGGTGGCAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACTTGACCTCTAAGCCACTACTCAGTGCTGCTGGTGGCAATGCA  400

seq1  TCCTTATAATCCCAAAGCCATTCCTGAAGAGCCATGTGCTTCCCCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAATCCCAAAGCCATTCCTGAAGAGCCATGTGCTTCCCCATTGT  450

seq1  CAAGAAGCATTCTGAAGTCAATGGTAACAGACTAGCCTATGATCTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGCATTCTGAAGTCAATGGTAACAGACTAGCCTATGATCTTTGGC  500

seq1  TCTAATAGTTATCCTGCTTCATGCTGGCCAGGACTTGGAACAAGGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAGTTATCCTGCTTCATGCTGGCCAGGACTTGGAACAAGGGAAAC  550

seq1  ATCTCTGCATTGTTGGTGTTTGTGAAAACTTGTATAACTACTTTGGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCATTGTTGGTGTTTGTGAAAACTTGTATAACTACTTTGGAAAT  600

seq1  CAATTTGACAATTTCTCAGACAACTGGTAAGAGTTCTATCTCAAGACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGACAATTTCTCAGACAACTGGTAAGAGTTCTATCTCAAGACCCA  650

seq1  GCTATACCACTCCTGAGAATATACCCAAAAGATGCTTCACCATCTCACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACCACTCCTGAGAATATACCCAAAAGATGCTTCACCATCTCACAA  700

seq1  CAACACTTGTCTAACTATATTCATGGCAGATTTATTCATAATAGCCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTGTCTAACTATATTCATGGCAGATTTATTCATAATAGCCAAAA  750

seq1  ACTGGAAACAACTTAGATGTCCCTCAACTGAAAAATGGATAAAGAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAACAACTTAGATGTCCCTCAACTGAAAAATGGATAAAGAAAATG  800

seq1  TGGTACACCTTCACAATGGAATACTATTCAGCCATTAAAAACAAAGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACACCTTCACAATGGAATACTATTCAGCCATTAAAAACAAAGACAT  850

seq1  CATGAATTTTGAAGAAAAATCGAT-GGATCTTGAGAATATCATCCAAAGT  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATGAATTTTGAAGAAAAATCGATGGGATCTTGAGAATATCATCCAAAGT  900

seq1  GAGGTAACCCAGTCCCAAAAGGACATGTATAATGTGTACTTACTTATAAG  949
      ||| || ||||||| |||||||||||||||||||||||||||||||||||
seq2  GAGTTATCCCAGTCTCAAAAGGACATGTATAATGTGTACTTACTTATAAG  950

seq1  TGGATATTAGCCATAAAGTACAGGATACCCATGCTATACTCCACAGACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTAGCCATAAAGTACAGGATACCCATGCTATACTCCACAGACCC  1000

seq1  AAAGAAGCTAAACA  1013
       |||||||||||||
seq2  -AAGAAGCTAAACA  1013