BAC Information

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BAC

Clone NameB6Ng01-166A10
Chromosome11 (Build37)
Map Location 32,568,656 - 32,678,363
singlet/doubletdoublet
Overlap geneFbxw11, LOC666616
Upstream gene2310022M17Rik, Cpeb4, 4930524B15Rik, Nsg2, LOC669207, Il9r, 3300001G02Rik, Rhbdf1, Mpg, Mare, Hba-x, Hba-a1, F830116E18Rik, Hbq1, Sh3pxd2b, Ubtd2, 1700007I06Rik, Stk10
Downstream gene1700008A04Rik, LOC666620, LOC670035, LOC432548, Fgf18, Npm1, LOC666646, Tlx3, Ranbp17, LOC666258, Anp32c, LOC669306, LOC666269, Gabrp, D130052B06Rik, Kcnip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166A10.bB6Ng01-166A10.g
ACCDH957923DH957924
length1,058658
definitionDH957923|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A10, 5' end.DH957924|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,677,303 - 32,678,363)(32,568,656 - 32,569,303)
sequence
gaattccccactcgcttaccaatttaaagtgtggtttccaatctgcaaga
ttgtgttcatttgtattttctgatgcattgggaacttggcttcctgtttt
tgcctccttgctgagccttttctggcagcagctcacatggtggcatgtgg
caggatcgtctctgcaatgagggactctggagttgactcagagtctctgc
tgcagtgactgaataaagtggaaggggcccactcaggcttggcaaatcca
aaccgcccagtagatgccaggaccagtctgatattgattagcattattgt
taccattccaacatttctgttataggacaggaagctgtcgtcacagtttc
ccataatcccctgtgccatctctcccctcgaggaagactggactttgcac
ttgtttccagtgaatggaacacaataaaatggtagcatttgcctcaacag
ttagctttgaagggctggggctcccctctcattgcttttttccctttgtg
cacttcaggaaatgacctgtcgtgctgaaagttctcacgtgacgggaact
gggaggagccacctgctatcaggatctgagtcctgccagtaattgtataa
acttggacatagatcctttgccagacttctgatgaggacagaaaccacaa
gaaacctgaagaagatgtaactaaatcatagtcagatctcatgcatacaa
aaattgtgaggtaatggatgtcatattaagtcattcaatttgggctgatt
tgttacacagcaatagctaattaatatgtgatggaagtttctttgagaag
caggctctactgaggacttctctcttttaatgtgggctggtgggatgtgg
gcaccaagacacatgtgtgtagaccagagatcaatgctttaaggtcagtt
ctcttattctcccttcatgtggattccaagaatcaaactctgatagtcag
gttttacagcaagctctttacccactgagctatcgtgccatctctgacta
cttttcttgacacttaccaaacttgtatttccccccctcctcaacatggc
aatagata
gaattctggaattttggtttctttataaaacaaagaaatactacaagaat
gtgcctttgttttaatcccaggtgtggaacatgggctgcttcggattgtc
cacagctgctgaccatgttttctctcactctagcaggggcatagttttgc
tgaagatagtttctgtgattgtgtgacgtttggaatcctgggaatttttc
agagggtatataaatgataggacccctgagaggggtggttgatgggttta
ttaatagtatttaaagaagaaacatgaaagaaattagattcagatctctc
tctccttctccttctacctctttctccctctcccttcctctctccctctc
tctccctcttctttcctccctctcctccctcccttcctcacctccctccc
ttcctctcccctatctttctttctctcctatgtgtgatagtgggtgaaac
tggggggataaagggtgggaaaaagaagaacccacaaagtagcaaagact
agctacacatctgtgttactggtctgtggagtattttaattatttgctta
tagctaagtcagtcacaaagttattgaaacagttgtgttaaaaggatttg
gggcaagttagtaggaatccttttatttttttacatgtggccttttacgt
ggcttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_32677303_32678363
seq2: B6Ng01-166A10.b_48_1105 (reverse)

seq1  TATCTTATTGCCATGTTTGAGGA-GGGGGGAAATACAAGTTTTGGTAAGT  49
      |||| |||||||||| ||||||| ||||||||||||||| ||||||||||
seq2  TATC-TATTGCCATG-TTGAGGAGGGGGGGAAATACAAG-TTTGGTAAGT  47

seq1  GTCAAGAAAAGTAGTCAGAGATGGCACGATAGCTCAGTGGGTAAAAGAGC  99
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTCAAGAAAAGTAGTCAGAGATGGCACGATAGCTCAGTGGGT-AAAGAGC  96

seq1  TTGCTGTAAAACCTGACTATCAGAGTTTGATTCTTGGAATCCACATGAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTAAAACCTGACTATCAGAGTTTGATTCTTGGAATCCACATGAAG  146

seq1  GGAGAATAAGAGAACTGACCTTAAAGCATTGATCTCTGGTCTACACACAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATAAGAGAACTGACCTTAAAGCATTGATCTCTGGTCTACACACAT  196

seq1  GTGTCTTGGTGCCCACATCCCACCAGCCCACATTAAAAGAGAGAAGTCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGGTGCCCACATCCCACCAGCCCACATTAAAAGAGAGAAGTCCT  246

seq1  CAGTAGAGCCTGCTTCTCAAAGAAACTTCCATCACATATTAATTAGCTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGCCTGCTTCTCAAAGAAACTTCCATCACATATTAATTAGCTAT  296

seq1  TGCTGTGTAACAAATCAGCCCAAATTGAATGACTTAATATGACATCCATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTAACAAATCAGCCCAAATTGAATGACTTAATATGACATCCATT  346

seq1  ACCTCACAATTTTTGTATGCATGAGATCTGACTATGATTTAGTTACATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAATTTTTGTATGCATGAGATCTGACTATGATTTAGTTACATCT  396

seq1  TCTTCAGGTTTCTTGTGGTTTCTGTCCTCATCAGAAGTCTGGCAAAGGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGTTTCTTGTGGTTTCTGTCCTCATCAGAAGTCTGGCAAAGGAT  446

seq1  CTATGTCCAAGTTTATACAATTACTGGCAGGACTCAGATCCTGATAGCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCCAAGTTTATACAATTACTGGCAGGACTCAGATCCTGATAGCAG  496

seq1  GTGGCTCCTCCCAGTTCCCGTCACGTGAGAACTTTCAGCACGACAGGTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCCTCCCAGTTCCCGTCACGTGAGAACTTTCAGCACGACAGGTCA  546

seq1  TTTCCTGAAGTGCACAAAGGGAAAAAAGCAATGAGAGGGGAGCCCCAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAAGTGCACAAAGGGAAAAAAGCAATGAGAGGGGAGCCCCAGCC  596

seq1  CTTCAAAGCTAACTGTTGAGGCAAATGCTACCATTTTATTGTGTTCCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGCTAACTGTTGAGGCAAATGCTACCATTTTATTGTGTTCCATT  646

seq1  CACTGGAAACAAGTGCAAAGTCCAGTCTTCCTCGAGGGGAGAGATGGCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAACAAGTGCAAAGTCCAGTCTTCCTCGAGGGGAGAGATGGCAC  696

seq1  AGGGGATTATGGGAAACTGTGACGACAGCTTCCTGTCCTATAACAGAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTATGGGAAACTGTGACGACAGCTTCCTGTCCTATAACAGAAAT  746

seq1  GTTGGAATGGTAACAATAATGCTAATCAATATCAGACTGGTCCTGGCATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAATGGTAACAATAATGCTAATCAATATCAGACTGGTCCTGGCATC  796

seq1  TACTGGGCGGTTTGGATTTGCCAAGCCTGAGTGGGCCCCTTCCACTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGCGGTTTGGATTTGCCAAGCCTGAGTGGGCCCCTTCCACTTTAT  846

seq1  TCAGTCACTGCAGCAGAGACTCTGAGTCAACTCCAGAGTCCCTCATTGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACTGCAGCAGAGACTCTGAGTCAACTCCAGAGTCCCTCATTGCA  896

seq1  GAGACGATCCTGCCACATGCCACCATGTGAGCTGCTGCCAGAAAAGGCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGATCCTGCCACATGCCACCATGTGAGCTGCTGCCAGAAAAGGCTC  946

seq1  AGCAAGGAGGCAAAAACAGGAAGCCAAGTTCCCAATGCATCAGAAAATAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAGGCAAAAACAGGAAGCCAAGTTCCCAATGCATCAGAAAATAC  996

seq1  AAATGAACACAATCTTGCAGATTGGAAACCACACTTTAAATTGGTAAGCG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACACAATCTTGCAGATTGGAAACCACACTTTAAATTGGTAAGCG  1046

seq1  AGTGGGGAATTC  1061
      ||||||||||||
seq2  AGTGGGGAATTC  1058

seq1: chr11_32568656_32569303
seq2: B6Ng01-166A10.g_76_725

seq1  GAATTTTGGTTTCTTTATAAAACAAAGAAATACTACAAGAATGTGCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGTTTCTTTATAAAACAAAGAAATACTACAAGAATGTGCCTTT  50

seq1  GTTTTAATCCCAGGTGTGGAACATGGGCTGCTTCGGATTGTCCACAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATCCCAGGTGTGGAACATGGGCTGCTTCGGATTGTCCACAGCTG  100

seq1  CTGACCATGTTTTCTCTCACTCTAGCAGGGGCATAGTTTTGCTGAAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATGTTTTCTCTCACTCTAGCAGGGGCATAGTTTTGCTGAAGATA  150

seq1  GTTTCTGTGATTGTGTGACGTTTGGAATCCTGGGAATTTTTCAGAGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTGATTGTGTGACGTTTGGAATCCTGGGAATTTTTCAGAGGGTA  200

seq1  TATAAATGATAGGACCCCTGAGAGGGGTGGTTGATGGGTTTATTAATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGATAGGACCCCTGAGAGGGGTGGTTGATGGGTTTATTAATAGT  250

seq1  ATTTAAAGAAGAAACATGAAAGAAATTAGATTCAGATCTCTCTCTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGAAGAAACATGAAAGAAATTAGATTCAGATCTCTCTCTCCTTC  300

seq1  TCCTTCTACCTCTTTCTCCCTCTCCCTTCCTCTCTCCCTCTCTCTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTACCTCTTTCTCCCTCTCCCTTCCTCTCTCCCTCTCTCTCCCTC  350

seq1  TTCTTTCCTCCCTCTCCTCCCTCCCTTCCTCTCCTCCCTCCCTTCCTCTC  400
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCTTTCCTCCCTCTCCTCCCTCCCTTCCTCACCTCCCTCCCTTCCTCTC  400

seq1  CCCTATCTTTCTTTCTCTCCTATGTGTGATAGTGGGTGAAACTGGGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCTTTCTTTCTCTCCTATGTGTGATAGTGGGTGAAACTGGGGGGA  450

seq1  TAAAGGGTGGGAAAAAGAAGAACCCACAAAGTAGCAAAGACTAGCTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGTGGGAAAAAGAAGAACCCACAAAGTAGCAAAGACTAGCTACAC  500

seq1  ATCTGTGTTACTGGTCTGTGGAGTATTTTAATTATTTGCTTATAGCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTTACTGGTCTGTGGAGTATTTTAATTATTTGCTTATAGCTAAG  550

seq1  TCAGTCACAAAGTTATTGAAACAGTTGTGTTAAAAGGATTTGGGGCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACAAAGTTATTGAAACAGTTGTGTTAAAAGGATTTGGGGCAAGT  600

seq1  TAGTAGGAATCC-TTTATTTCTTTACATGTGGCC-TTTACGTGGCTTCAC  648
      |||||||||||| ||||||| ||||||||||||| |||||||||||||||
seq2  TAGTAGGAATCCTTTTATTTTTTTACATGTGGCCTTTTACGTGGCTTCAC  650