BAC Information

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BAC

Clone NameB6Ng01-166A22
Chromosome10 (Build37)11 (Build37)
Map Location 104,054,226 - 104,054,36327,430,992 - 27,432,118
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166A22.bB6Ng01-166A22.g
ACCDH957943DH957944
length7931,125
definitionDH957943|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A22, 5' end.DH957944|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,226 - 104,054,363)(27,430,992 - 27,432,118)
sequence
gaattctcacatgaggaatatcgaatggctgagaagcacctgaaaaaatg
tgcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcgcatcagtcagaatgactaagattaaaaataaaaaaatctag
caaaaagcaaacagggaatttggaacactatgaaaagacactatgaaaag
accttagaataatagcagcagaaaacgatctcagctcaaaggcccagaaa
atcgatttaagaaaatcatagaagaaaaatttcctaacccaaaggatatg
tttataatgttataagaagcctgcagaaaaacaaattgatttgatgaaaa
aataaaagtctgcttgtcacataatagtcaaaatactaaatatacaaagt
tatgaaagactactaaaagctgtaaggcaagtagtcttaggaacatacaa
ggcagatgtattagaattacaccttacttgtcaatggaaattccaaaagc
cataatgtcctagacaggtctgctacggactttaagagataacagatgcc
agcctaaagtattattgaagacaaaactttcaatcaccatagatggaggg
atacaggggacatacctaaacatattaaaggcaacatactacaagtgtat
agtgaacatcaaattaaatggagagaaattcacagcaattctactaaaat
catgagcaagagaaagttctccactctgtccatatctattcaatacagta
cttgaagtcttaactagaacaataagaaaatggaaaggatagc
gaattctctgttcctaaatgacttcttctaatatttctttcttaaaatag
tttgttttcccatcctaagtttatagaaacaaccacacaattaattttca
agaacattgtttatggcagattttctttgtttgaaacatttatcattgta
tcatcatgactacaattgcattaaaaacactgccctctcatcagtgatgt
tgcatgaatgttggtttcctcagtaactcagaacagcagtatcagaccac
ataaaaaggtagaaggaggacttgagataatcccttgtcatttcattctg
aatagttgttaaaatatttgaattttggttatttgccttgaaatttgtag
aaaatatatgatggaatagtgtagggttgattaagacatcatatctgaaa
agagcaacagggagtatcaataagagaaaaatacacagacacataacagg
ccactgataggactaaattggtagagtataataaaaagaagaaaggaaga
aacaaataaactactcccagaccatagtattcctatcactaccactacag
atgctaatgcaattgttattgtaactgtgcatagagtagaacatgaaatc
ataacaccaaatctggagactgttctcatggaaaatgccctaatcaaatg
atgaaacaattctatatactggacacatctaacagtttattatttaatcc
aataaactactgctttagacaacttttaaaaatattgttcaaagtcttga
taaatatgaggtgtcttggagagcactatacttttaccatttaaaaagat
gagtatttgttcttcatttctctgtacttgcatttttaatgaatcaatct
gataagtaggagaaattctactgaaataaacatcatccttattctcctgt
aaatacaaaagtaaaaaggtttcagattaaatgatttatagctccagaaa
tggtatttcatccataaagtttacttctccaattgacacagaccaagtat
attcaaaatgtggaaagcacccttacatccttattaggtactttttcaga
gtcaaacaaaaacaaaaaacatgagaggcacatctcccgaaattaggaac
tcagcatcaggtgggtgggatatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054226_104054363
seq2: B6Ng01-166A22.b_46_183 (reverse)

seq1  ATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTG  50
      |||||| ||||||| ||||||||||| || ||||||||||||||||||||
seq2  ATTTTTAATCTTAGTCATTCTGACTGATGCGAGGTGGAATCTCAGGGTTG  50

seq1  TTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGG  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGCACATTTTTTCAGG  100

seq1  TGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  138
      |||||||| |||||||| ||||||||| ||||||||||
seq2  TGCTTCTCAGCCATTCGATATTCCTCATGTGAGAATTC  138

seq1: chr11_27430992_27432118
seq2: B6Ng01-166A22.g_66_1190 (reverse)

seq1  CCATAT-CCAACCACCTGATGCTGAGTTCCTTA-TTCTGGAGATGTGCCT  48
      |||||| ||| |||||||||||||||||||| | ||| ||||||||||| 
seq2  CCATATCCCACCCACCTGATGCTGAGTTCCTAATTTCGGGAGATGTGCC-  49

seq1  TCTCATG-TTTTTGTTTTTGTTTTTGACTCTG-AAAAGTACCTAATAGGG  96
      ||||||| ||||||||||||  |||||||||| |||||||||||||| ||
seq2  TCTCATGTTTTTTGTTTTTG--TTTGACTCTGAAAAAGTACCTAATAAGG  97

seq1  ATGTAAGGGTGCTTTCCACAATTTTGAATATACTTGGTCTTGTTGTCAAT  146
      ||||||||||||||||||| ||||||||||||||||||||   |||||||
seq2  ATGTAAGGGTGCTTTCCAC-ATTTTGAATATACTTGGTCT--GTGTCAAT  144

seq1  TGGAGAAGTAAACTTTATGGATGAAATACCATTTCTGGAGCTATAAATCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGTAAACTTTATGGATGAAATACCATTTCTGGAGCTATAAATCA  194

seq1  TTTAATCTGAAACCTTTTTACTTTTGTATTTACAGGAGAATAAGGATGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTGAAACCTTTTTACTTTTGTATTTACAGGAGAATAAGGATGAT  244

seq1  GTTTATTTCAGTAGAATTTCTCCTACTTATCAGATTGATTCATTAAAAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTCAGTAGAATTTCTCCTACTTATCAGATTGATTCATTAAAAAT  294

seq1  GCAAGTACAGAGAAATGAAGAACAAATACTCATCTTTTTAAATGGTAAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTACAGAGAAATGAAGAACAAATACTCATCTTTTTAAATGGTAAAA  344

seq1  GTATAGTGCTCTCCAAGACACCTCATATTTATCAAGACTTTGAACAATAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGCTCTCCAAGACACCTCATATTTATCAAGACTTTGAACAATAT  394

seq1  TTTTAAAAGTTGTCTAAAGCAGTAGTTTATTGGATTAAATAATAAACTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGTTGTCTAAAGCAGTAGTTTATTGGATTAAATAATAAACTGT  444

seq1  TAGATGTGTCCAGTATATAGAATTGTTTCATCATTTGATTAGGGCATTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGTCCAGTATATAGAATTGTTTCATCATTTGATTAGGGCATTTT  494

seq1  CCATGAGAACAGTCTCCAGATTTGGTGTTATGATTTCATGTTCTACTCTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGAACAGTCTCCAGATTTGGTGTTATGATTTCATGTTCTACTCTA  544

seq1  TGCACAGTTACAATAACAATTGCATTAGCATCTGTAGTGGTAGTGATAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTTACAATAACAATTGCATTAGCATCTGTAGTGGTAGTGATAGG  594

seq1  AATACTATGGTCTGGGAGTAGTTTATTTGTTTCTTCCTTTCTTCTTTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATGGTCTGGGAGTAGTTTATTTGTTTCTTCCTTTCTTCTTTTTA  644

seq1  TTATACTCTACCAATTTAGTCCTATCAGTGGCCTGTTATGTGTCTGTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTCTACCAATTTAGTCCTATCAGTGGCCTGTTATGTGTCTGTGTA  694

seq1  TTTTTCTCTTATTGATACTCCCTGTTGCTCTTTTCAGATATGATGTCTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTTATTGATACTCCCTGTTGCTCTTTTCAGATATGATGTCTTA  744

seq1  ATCAACCCTACACTATTCCATCATATATTTTCTACAAATTTCAAGGCAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCCTACACTATTCCATCATATATTTTCTACAAATTTCAAGGCAAA  794

seq1  TAACCAAAATTCAAATATTTTAACAACTATTCAGAATGAAATGACAAGGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAATTCAAATATTTTAACAACTATTCAGAATGAAATGACAAGGG  844

seq1  ATTATCTCAAGTCCTCCTTCTACCTTTTTATGTGGTCTGATACTGCTGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCAAGTCCTCCTTCTACCTTTTTATGTGGTCTGATACTGCTGTT  894

seq1  CTGAGTTACTGAGGAAACCAACATTCATGCAACATCACTGATGAGAGGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTACTGAGGAAACCAACATTCATGCAACATCACTGATGAGAGGGC  944

seq1  AGTGTTTTTAATGCAATTGTAGTCATGATGATACAATGATAAATGTTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTTAATGCAATTGTAGTCATGATGATACAATGATAAATGTTTCA  994

seq1  AACAAAGAAAATCTGCCATAAACAATGTTCTTGAAAATTAATTGTGTGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAATCTGCCATAAACAATGTTCTTGAAAATTAATTGTGTGGT  1044

seq1  TGTTTCTATAAACTTAGGATGGGAAAACAAACTATTTTAAGAAAGAAATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTATAAACTTAGGATGGGAAAACAAACTATTTTAAGAAAGAAATA  1094

seq1  TTAGAAGAAGTCATTTAGGAACAGAGAATTC  1127
      |||||||||||||||||||||||||||||||
seq2  TTAGAAGAAGTCATTTAGGAACAGAGAATTC  1125