BAC Information

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BAC

Clone NameB6Ng01-167H21
Chromosome11 (Build37)
Map Location 102,307,017 - 102,454,521
singlet/doubletdoublet
Overlap geneBC025575, Itga2b, Mdk-ps1, LOC100040792
Upstream geneIfi35, Vat1, Rnd2, Brca1, Nbr1, Tmem106a, LOC667306, Rdm1, Arl4d, LOC100038842, Dhx8, Etv4, Meox1, LOC194960, Sost, Dusp3, 1700006E09Rik, Mpp3, Cd300lg, Mpp2, Ppy, Pyy, LOC100040687, LOC666411, Nags, Tmem101, Lsm12, G6pc3, Hdac5, BC030867, Asb16, 2010008E23Rik, Ubtf, Slc4a1, Rap2ip, Slc25a39, Grn
Downstream geneFzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap, 3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2, Fmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik, Plekhm1, Lrrc37a, Gm884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167H21.bB6Ng01-167H21.g
ACCDH958974DH958975
length1,168616
definitionDH958974|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H21, 5' end.DH958975|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,453,347 - 102,454,521)(102,307,017 - 102,307,632)
sequence
gaattcaggatgtggtatttgacagtgatgcatttgcctgctgaacccat
aaaactttttttaaaaaatttatttattgttatatgtaaatacactgtag
ctgtcttcagacacaccagaggaaggcgtcagatcttaccacagatggtt
gtgagccaccatgtggtcgctgggatttgaactcaggaccctcagaagag
cagtcagtgctcccaaccagtgaaccttctcaccagccccctataaaact
ttttaaatacataaatgaggtgaagagctatggcccacttctggcttcat
ctggcttcatcgtgcacccatgtgcaatgaattctgcatagacactgatt
agagaaaggctcacgtccaaacacttacacacatacccaccgttgtgcag
attcttcgtgctgaagttcaatgtgaattatggaggaggctgggttccca
tggaacacaaagccattttgggtggagctatgatactctctcttcccttt
ctcaatcacttctcccttctccctgcaccccagcccccacaggctccctt
ctctcatcacggccttaaccttctaaaggttttagacactctctagccaa
ggctctacaatggacataggatcccaatgatgcccaacctccgcatcacg
agtagaaagaacactgagtcctaacttgagaggacgttcatgttggcttg
cggttccagctggtccttctcagtgggacacagcagaagggtccagcccc
agactcttgggttctaggcagcaccttcttcaccttgccagtattttctg
tagggtttgtcatgtaactttaggataagtgagaagagagaactaactga
gcacacactcaccacaaattcaactcttctttttgagatagagtttccta
tatcccagactggccaagaacttgctatatagcccaggagggcctcaaat
ttctcattctcctgcctttacttgccaagtgccactgtgcccggtttcag
tagaccttttttagagctcagctgcatcattggactcctagagtctacat
acattaagaatcatgggaaaaagatggggttgtttcttgccctgcttgct
gaatcaaacctataatctccaaataacttgtctgtgcatcctgaactatc
tgcttcagttgttcagtc
gaattctgagaagctaaaagagtctgactgctcccagccccattctaggc
ttaggaacagctggagaaagcagctgggaagagaggatcctggagtctga
aattttgtcacttgagggaagccttttggctcaagggccaaagcctcaaa
agaggtagaggagggacctgggaaacaaaacagaggtgggcaggtaaggc
cggaaggaaagtcagcaccaagctgggaggtggggcaggtgtctagcaga
ctcctttccctgcttccccacagcctgggctccccgccagctgcctgaga
gagccccttattctggctgtattccagccaattccctgggcccttcctcc
ctcccctgggccttggaggaggagaagcttcttagcttgggcctcttctc
tgggagattaggggagactgaggcacaggaagatccctccccaccctcaa
agcttggcattccatacagtatctgcatctctccacttggctagccctgc
cttgttccaggaggaaatccgacctccttccttcatccggaccctacttc
cctcaaccagacccccgccttccgcctttcctgctagcttctggtgtgtg
tgtgtgtggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_102453347_102454521
seq2: B6Ng01-167H21.b_46_1213 (reverse)

seq1  GACTGAACAGACTGGAAAGCAGATAAGTCCAGAATGCACAG-CAGGTTAT  49
      ||||||||| ||||  |||||||| ||| ||| |||||||| || |||||
seq2  GACTGAACA-ACTG--AAGCAGAT-AGTTCAGGATGCACAGACAAGTTAT  46

seq1  TTGGAGATTATAAGTTTGGATCAGCAGGCAGGGCCAAGAAACAACACCCA  99
      |||||||||||| |||||  |||||| |||||| ||||||||||| ||||
seq2  TTGGAGATTATAGGTTTGATTCAGCAAGCAGGG-CAAGAAACAAC-CCCA  94

seq1  ATCTTCTCCCATGATTC-TAATGTATGTAGACTCTAGGAGTTCCAATGAT  148
         || ||||||||||| |||||||||||||||||||||| |||||||||
seq2  TCTTTTTCCCATGATTCTTAATGTATGTAGACTCTAGGAG-TCCAATGAT  143

seq1  GCAGCTGAGCTCTTAAAAAAGGTTCTACTGGAACCGGGCACAGTGGCACT  198
      |||||||||||| ||||||||| ||||||| |||||||||||||||||||
seq2  GCAGCTGAGCTC-TAAAAAAGG-TCTACTGAAACCGGGCACAGTGGCACT  191

seq1  TGGCAAGTAAAGGCAGGAGAATGAGAAATTTGAGGCCCTCCTTGGCTATA  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGCAAGTAAAGGCAGGAGAATGAGAAATTTGAGGCCCTCCTGGGCTATA  241

seq1  TAGCAAGTTCTTGGCCAGTCTGGGATATAGGAAACTCTATCTCAAAAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTTCTTGGCCAGTCTGGGATATAGGAAACTCTATCTCAAAAAGA  291

seq1  AGAGTTGAATTTGTGGTGAGTGTGTGCTCAGTTAGTTCTCTCTTCTCACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGAATTTGTGGTGAGTGTGTGCTCAGTTAGTTCTCTCTTCTCACT  341

seq1  TATCCTAAAGTTACATGACAAACCCTACAGAAAATACTGGCAAGGTGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAAAGTTACATGACAAACCCTACAGAAAATACTGGCAAGGTGAAG  391

seq1  AAGGTGCTGCCTAGAACCCAAGAGTCTGGGGCTGGACCCTTCTGCTGTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCTGCCTAGAACCCAAGAGTCTGGGGCTGGACCCTTCTGCTGTGT  441

seq1  CCCACTGAGAAGGACCAGCTGGAACCGCAAGCCAACATGAACGTCCTCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGAAGGACCAGCTGGAACCGCAAGCCAACATGAACGTCCTCTC  491

seq1  AAGTTAGGACTCAGTGTTCTTTCTACTCGTGATGCGGAGGTTGGGCATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGGACTCAGTGTTCTTTCTACTCGTGATGCGGAGGTTGGGCATCA  541

seq1  TTGGGATCCTATGTCCATTGTAGAGCCTTGGCTAGAGAGTGTCTAAAACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATCCTATGTCCATTGTAGAGCCTTGGCTAGAGAGTGTCTAAAACC  591

seq1  TTTAGAAGGTTAAGGCCGTGATGAGAGAAGGGAGCCTGTGGGGGCTGGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGGTTAAGGCCGTGATGAGAGAAGGGAGCCTGTGGGGGCTGGGG  641

seq1  TGCAGGGAGAAGGGAGAAGTGATTGAGAAAGGGAAGAGAGAGTATCATAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGAGAAGGGAGAAGTGATTGAGAAAGGGAAGAGAGAGTATCATAG  691

seq1  CTCCACCCAAAATGGCTTTGTGTTCCATGGGAACCCAGCCTCCTCCATAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCAAAATGGCTTTGTGTTCCATGGGAACCCAGCCTCCTCCATAA  741

seq1  TTCACATTGAACTTCAGCACGAAGAATCTGCACAACGGTGGGTATGTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTGAACTTCAGCACGAAGAATCTGCACAACGGTGGGTATGTGTG  791

seq1  TAAGTGTTTGGACGTGAGCCTTTCTCTAATCAGTGTCTATGCAGAATTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTTGGACGTGAGCCTTTCTCTAATCAGTGTCTATGCAGAATTCA  841

seq1  TTGCACATGGGTGCACGATGAAGCCAGATGAAGCCAGAAGTGGGCCATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACATGGGTGCACGATGAAGCCAGATGAAGCCAGAAGTGGGCCATAG  891

seq1  CTCTTCACCTCATTTATGTATTTAAAAAGTTTTATAGGGGGCTGGTGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCACCTCATTTATGTATTTAAAAAGTTTTATAGGGGGCTGGTGAGA  941

seq1  AGGTTCACTGGTTGGGAGCACTGACTGCTCTTCTGAGGGTCCTGAGTTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCACTGGTTGGGAGCACTGACTGCTCTTCTGAGGGTCCTGAGTTCA  991

seq1  AATCCCAGCGACCACATGGTGGCTCACAACCATCTGTGGTAAGATCTGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCGACCACATGGTGGCTCACAACCATCTGTGGTAAGATCTGAC  1041

seq1  GCCTTCCTCTGGTGTGTCTGAAGACAGCTACAGTGTATTTACATATAACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTCTGGTGTGTCTGAAGACAGCTACAGTGTATTTACATATAACA  1091

seq1  ATAAATAAATTTTTTAAAAAAAGTTTTATGGGTTCAGCAGGCAAATGCAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATTTTTTAAAAAAAGTTTTATGGGTTCAGCAGGCAAATGCAT  1141

seq1  CACTGTCAAATACCACATCCTGAATTC  1175
      |||||||||||||||||||||||||||
seq2  CACTGTCAAATACCACATCCTGAATTC  1168

seq1: chr11_102307017_102307632
seq2: B6Ng01-167H21.g_67_682

seq1  GAATTCTGAGAAGCTAAAAGAGTCTGACTGCTCCCAGCCCCATTCTAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAAGCTAAAAGAGTCTGACTGCTCCCAGCCCCATTCTAGGC  50

seq1  TTAGGAACAGCTGGAGAAAGCAGCTGGGAAGAGAGGATCCTGGAGTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACAGCTGGAGAAAGCAGCTGGGAAGAGAGGATCCTGGAGTCTGA  100

seq1  AATTTTGTCACTTGAGGGAAGCCTTTTGGCTCAAGGGCCAAAGCCTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTCACTTGAGGGAAGCCTTTTGGCTCAAGGGCCAAAGCCTCAAA  150

seq1  AGAGGTAGAGGAGGGACCTGGGAAACAAAACAGAGGTGGGCAGGTAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGAGGAGGGACCTGGGAAACAAAACAGAGGTGGGCAGGTAAGGC  200

seq1  CGGAAGGAAAGTCAGCACCAAGCTGGGAGGTGGGGCAGGTGTCTAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGGAAAGTCAGCACCAAGCTGGGAGGTGGGGCAGGTGTCTAGCAGA  250

seq1  CTCCTTTCCCTGCTTCCCCACAGCCTGGGCTCCCCGCCAGCTGCCTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCCCTGCTTCCCCACAGCCTGGGCTCCCCGCCAGCTGCCTGAGA  300

seq1  GAGCCCCTTATTCTGGCTGTATTCCAGCCAATTCCCTGGGCCCTTCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTTATTCTGGCTGTATTCCAGCCAATTCCCTGGGCCCTTCCTCC  350

seq1  CTCCCCTGGGCCTTGGAGGAGGAGAAGCTTCTTAGCTTGGGCCTCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTGGGCCTTGGAGGAGGAGAAGCTTCTTAGCTTGGGCCTCTTCTC  400

seq1  TGGGAGATTAGGGGAGACTGAGGCACAGGAAGATCCCTCCCCACCCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATTAGGGGAGACTGAGGCACAGGAAGATCCCTCCCCACCCTCAA  450

seq1  AGCTTGGCATTCCATACAGTATCTGCATCTCTCCACTTGGCTAGCCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCATTCCATACAGTATCTGCATCTCTCCACTTGGCTAGCCCTGC  500

seq1  CTTGTTCCAGGAGGAAATCCGACCTCCTTCCTTCATCCGGACCCTACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCAGGAGGAAATCCGACCTCCTTCCTTCATCCGGACCCTACTTC  550

seq1  CCTCAACCAGACCCCCGCCTTCCGCCTTTCCTGCTAGCTTCTGGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCAGACCCCCGCCTTCCGCCTTTCCTGCTAGCTTCTGGTGTGTG  600

seq1  TGTGTGTGGGGGGGGG  616
      ||||||||||||||||
seq2  TGTGTGTGGGGGGGGG  616