BAC Information

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BAC

Clone NameB6Ng01-169H07
Chromosome11 (Build37)
Map Location 91,514,674 - 91,661,589
singlet/doubletdoublet
Overlap genenone
Upstream geneTom1l1, LOC638903, EG664976, Kif2b
Downstream geneLOC382545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169H07.bB6Ng01-169H07.g
ACCDH960431DH960432
length1,0661,095
definitionDH960431|Mus musculus domesticus DNA, BAC clone: B6Ng01-169H07, 5' end.DH960432|Mus musculus domesticus DNA, BAC clone: B6Ng01-169H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,660,521 - 91,661,589)(91,514,674 - 91,515,781)
sequence
gaattcatgaagtgttttctttgttaaatacattaaaggagaatgctttc
acatttgccaaagtagatattttacacgttggagtaaggcacaagttgtc
aagtaagtcctacatgcctagagagatggctcaatggttaagagcactaa
cctctcctctagaggacaagggtttgactctcaacactcatgtagtggcc
cagtacagtttctaactcgagtctcagggatccagtaacctcataggcag
tggagacatttggtgaaataaatcattcatatacataaataaaaataaat
aaaagctcaaatgttttaaatctattgtgagcatttttcttataatttta
ccttcttctacattattaatatttctttgtaaagcataagaaacaacagt
gttcagccacagcacaggaactgtgagaaaagccatagtctagtgaaagt
gtaatcagtacaagaggtcaattttattttgctattacactctaagtttg
ctcctactactatattctgttattcagattattatatgcattaatacaac
ctactgtctccttctaaatcttcataatatgtgtttaaaatcaatttagt
gaatttagtactatccctaaaatccctaaggagtcttgattagtactgcc
ttccacttcatttttgtcttttgtcaaatctaaatttattctaaagttct
tatcatatgtgtttaattgctttataaatataatgaatgaatattcagat
cttaaattgttttacttccttcatatttaatatcaacaaaataaaacaat
aagttcaacaagcttctaaatccttgtctactgttctggtccgggaaaat
gagttctctgtttttaacacgggagaagcctttatagtatttagtaacaa
caaaaaaaaaaaaaaaaaaacaagtgaaagtcaataagatgactcagtgg
gtaaaggggctgagttccaagtctgacagcctttgttcaatccctggaag
caacatggttgaagaaactgactactaaggcatcttctgaattacacagg
gcccactccacgatta
gaattcttgtgcttgcaaaggtacgtctttactgaatgagccatttattc
aatctccttccgaaagtttttaaagtcaagtcaggactgttaatgttgga
tgcacagctaatactacttataccatgatctaggtttctgctatttcatt
ttaagtgtggcaaattaaaaaataaaaatgaaccatggtactctattcat
ccagaaagagcacatttcatttacatatttgtaatatttaaatcatatac
attttcaccaattattttaaatttccaagaatatagaagaatataattcc
tcccaacagagccagaaatgtcaattttaacagtgtcaataaatgcagat
ttttttgggggggggggaatctactgcacagctcttgactggaaagtgat
agagtagagttgtttgcacattcttaagattgtttcacaaaagatatatg
aacaacaattgtcagttagttaatgaagctgtactgcagggtttcaacat
aaactcacaaggttgactgtctgctgtccctctcttaccaagtagatatt
accctcttttttatacagttataaatcatttatacaaacataaaattaga
cgaaaaggccatagagttaagccagcctaaaacattgtgcactgggtatg
taattttaaaaggcaattgggagaaaaaattattggtaatcatttacttg
tttttcatagttatttatcataatatttagatcagggatggtcctaatat
aaaacattaaaatataagttttgagtcattgcaaataaagaggtggcaaa
cttcactcaacatgggacaggccacttgtcactggccactgtcaccaaga
tcaagaatgtagacacatccctgcagcacaagaatgtcttagaagctgat
tgccttctgacttctgatggctatctgattgattgctgctctgtgtcaca
tacctgcctttggattcagctttctttcttcatctttcaaggctatggcc
aaactacaaagctctcacttttacaaactctttgtgtttgcatcgctcct
accattttcaagggaggtattctataagttgtacactctcaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91660521_91661589
seq2: B6Ng01-169H07.b_45_1110 (reverse)

seq1  TAATCGTGGGGTGGGGCCTGTGTAATTCAGAGGATGCCTTTTGGTAGTCA  50
      ||||||||| ||||| ||||||||||||||| ||||||  || |||||||
seq2  TAATCGTGGAGTGGGCCCTGTGTAATTCAGAAGATGCC--TTAGTAGTCA  48

seq1  GTTTTCTTCAACCATGTGGCTTCCAGGGATTGAACATAGGCTGTCAGACT  100
      | ||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  G-TTTCTTCAACCATGTTGCTTCCAGGGATTGAACAAAGGCTGTCAGACT  97

seq1  TGGAACTCAGCCCCTTTACCCACTGAGTCATCTTATTGACTTTCACTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCAGCCCCTTTACCCACTGAGTCATCTTATTGACTTTCACTTGT  147

seq1  TTTTTTTTTTTTTTTTTTGTTGTTACTAAATACTATAAAGGCTTCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTTTTTTTTTTTTTTTGTTGTTACTAAATACTATAAAGGCTTCTCCCG  197

seq1  TGTTAAAAACAGAGAACTCATTTTCCCGGACCAGAACAGTAGACAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAACAGAGAACTCATTTTCCCGGACCAGAACAGTAGACAAGGAT  247

seq1  TTAGAAGCTTGTTGAACTTATTGTTTTATTTTGTTGATATTAAATATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGCTTGTTGAACTTATTGTTTTATTTTGTTGATATTAAATATGAA  297

seq1  GGAAGTAAAACAATTTAAGATCTGAATATTCATTCATTATATTTATAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAAACAATTTAAGATCTGAATATTCATTCATTATATTTATAAAG  347

seq1  CAATTAAACACATATGATAAGAACTTTAGAATAAATTTAGATTTGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAACACATATGATAAGAACTTTAGAATAAATTTAGATTTGACAAA  397

seq1  AGACAAAAATGAAGTGGAAGGCAGTACTAATCAAGACTCCTTAGGGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAATGAAGTGGAAGGCAGTACTAATCAAGACTCCTTAGGGATTT  447

seq1  TAGGGATAGTACTAAATTCACTAAATTGATTTTAAACACATATTATGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATAGTACTAAATTCACTAAATTGATTTTAAACACATATTATGAAG  497

seq1  ATTTAGAAGGAGACAGTAGGTTGTATTAATGCATATAATAATCTGAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGGAGACAGTAGGTTGTATTAATGCATATAATAATCTGAATAA  547

seq1  CAGAATATAGTAGTAGGAGCAAACTTAGAGTGTAATAGCAAAATAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATAGTAGTAGGAGCAAACTTAGAGTGTAATAGCAAAATAAAATT  597

seq1  GACCTCTTGTACTGATTACACTTTCACTAGACTATGGCTTTTCTCACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTGTACTGATTACACTTTCACTAGACTATGGCTTTTCTCACAGT  647

seq1  TCCTGTGCTGTGGCTGAACACTGTTGTTTCTTATGCTTTACAAAGAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTGTGGCTGAACACTGTTGTTTCTTATGCTTTACAAAGAAATA  697

seq1  TTAATAATGTAGAAGAAGGTAAAATTATAAGAAAAATGCTCACAATAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGTAGAAGAAGGTAAAATTATAAGAAAAATGCTCACAATAGAT  747

seq1  TTAAAACATTTGAGCTTTTATTTATTTTTATTTATGTATATGAATGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATTTGAGCTTTTATTTATTTTTATTTATGTATATGAATGATTT  797

seq1  ATTTCACCAAATGTCTCCACTGCCTATGAGGTTACTGGATCCCTGAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACCAAATGTCTCCACTGCCTATGAGGTTACTGGATCCCTGAGACT  847

seq1  CGAGTTAGAAACTGTACTGGGCCACTACATGAGTGTTGAGAGTCAAACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTAGAAACTGTACTGGGCCACTACATGAGTGTTGAGAGTCAAACCC  897

seq1  TTGTCCTCTAGAGGAGAGGTTAGTGCTCTTAACCATTGAGCCATCTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTAGAGGAGAGGTTAGTGCTCTTAACCATTGAGCCATCTCTCT  947

seq1  AGGCATGTAGGACTTACTTGACAACTTGTGCCTTACTCCAACGTGTAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGTAGGACTTACTTGACAACTTGTGCCTTACTCCAACGTGTAAAA  997

seq1  TATCTACTTTGGCAAATGTGAAAGCATTCTCCTTTAATGTATTTAACAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTTTGGCAAATGTGAAAGCATTCTCCTTTAATGTATTTAACAAA  1047

seq1  GAAAACACTTCATGAATTC  1069
      |||||||||||||||||||
seq2  GAAAACACTTCATGAATTC  1066

seq1: chr11_91514674_91515781
seq2: B6Ng01-169H07.g_66_1160

seq1  GAATTCTTGTGCTTGCAAAGGTACGTCTTTACTGAATGAGCCATTTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGCTTGCAAAGGTACGTCTTTACTGAATGAGCCATTTATTC  50

seq1  AATCTCCTTCCGAAAGTTTTTAAAGTCAAGTCAGGACTGTTAATGTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCTTCCGAAAGTTTTTAAAGTCAAGTCAGGACTGTTAATGTTGGA  100

seq1  TGCACAGCTAATACTACTTATACCATGATCTAGGTTTCTGCTATTTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGCTAATACTACTTATACCATGATCTAGGTTTCTGCTATTTCATT  150

seq1  TTAAGTGTGGCAAATTAAAAAATAAAAATGAACCATGGTACTCTATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTGGCAAATTAAAAAATAAAAATGAACCATGGTACTCTATTCAT  200

seq1  CCAGAAAGAGCACATTTCATTTACATATTTGTAATATTTAAATCATATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGAGCACATTTCATTTACATATTTGTAATATTTAAATCATATAC  250

seq1  ATTTTCACCAATTATTTTAAATTTCCAAGAATATAGAAGAATATAATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACCAATTATTTTAAATTTCCAAGAATATAGAAGAATATAATTCC  300

seq1  TCCCAACAGAGCCAGAAATGTCAATTTTAACAGTGTCAATAAATGCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACAGAGCCAGAAATGTCAATTTTAACAGTGTCAATAAATGCAGAT  350

seq1  TTTTTTGGGGGGGGGGGAATCTACTGCACAGCTCTTGACTGGAAAGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGGGGGGGGGGAATCTACTGCACAGCTCTTGACTGGAAAGTGAT  400

seq1  AGAGTAGAGTTGTTTGCACATTCTTAAGATTGTTTCACAAAAGATATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGTTGTTTGCACATTCTTAAGATTGTTTCACAAAAGATATATG  450

seq1  AACAACAATTGTCAGTTAGTTAATGAAGCTGTACTGCAGGGTTTCAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAATTGTCAGTTAGTTAATGAAGCTGTACTGCAGGGTTTCAACAT  500

seq1  AAACTCACAAGGTTGACTGTCTGCTGTCCCTCTCTTACCAAGTAGATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACAAGGTTGACTGTCTGCTGTCCCTCTCTTACCAAGTAGATATT  550

seq1  ACCCTCTTTTTTATACAGTTATAAATCATTTATACAAACATAAAATTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTTTTTTATACAGTTATAAATCATTTATACAAACATAAAATTAGA  600

seq1  CGAAAAGGCCATAGAGTTAAGCCAGCCTAAAACATTGTGCACTGGGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAGGCCATAGAGTTAAGCCAGCCTAAAACATTGTGCACTGGGTATG  650

seq1  TAATTTTAAAAGGCAATTGGGAGAAAAAATTATTGGTAATCATTTACTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAAAAGGCAATTGGGAGAAAAAATTATTGGTAATCATTTACTTG  700

seq1  -TTTTCATAGTTATTTATCATAATATTTAGATCAGGGATGGTCCTAATAT  749
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATAGTTATTTATCATAATATTTAGATCAGGGATGGTCCTAATAT  750

seq1  AAAACATTAAAATATAAGTTTTGAGTCATTGCAAATAAAGAGGTGGCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTAAAATATAAGTTTTGAGTCATTGCAAATAAAGAGGTGGCAAA  800

seq1  CTTCACTCAACATGGGACAGGCCACTTGTCACTGGCCACTGTCACCAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCAACATGGGACAGGCCACTTGTCACTGGCCACTGTCACCAAGA  850

seq1  TCAAGAATGTAGACAACATCCCTGCAGCACAAGAATGTCTTAGAAGCTGA  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCAAGAATGTAGAC-ACATCCCTGCAGCACAAGAATGTCTTAGAAGCTGA  899

seq1  TTGCCTTCTGACTTCTGATGGCTATTCTGATTGATTGCTGCTCTGTGTCA  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGCCTTCTGACTTCTGATGGCTA-TCTGATTGATTGCTGCTCTGTGTCA  948

seq1  CATACCTGCCTTTGGATTCAAGCTTTCTTTTCTTTCATCTTTTCAAGGCT  999
      ||||||||||||||||||| ||||||||||   |||||| ||||||||||
seq2  CATACCTGCCTTTGGATTC-AGCTTTCTTT--CTTCATC-TTTCAAGGCT  994

seq1  ATGGCCAAACTTCCAAAGCTCTCACTTTTACAAAACTCTTTGTGTTTTGC  1049
      |||||||||| | |||||||||||||||||| |||||||||||| |||||
seq2  ATGGCCAAAC-TACAAAGCTCTCACTTTTAC-AAACTCTTTGTG-TTTGC  1041

seq1  AATCCGCTCTAACCATTTTC-AGTGATGGATTTTCCTATTAGTTGTGACA  1098
      |   |||||  ||||||||| || || | |||   |||| |||||| |||
seq2  A--TCGCTCCTACCATTTTCAAGGGAGGTATT---CTATAAGTTGT-ACA  1085

seq1  CTCTCAAGTC  1108
      ||||||||||
seq2  CTCTCAAGTC  1095