BAC Information

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BAC

Clone NameB6Ng01-170I11
Chromosome2 (Build37)11 (Build37)
Map Location 142,777,095 - 142,777,21614,478,658 - 14,479,431
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170I11.bB6Ng01-170I11.g
ACCDH961219DH961220
length137774
definitionDH961219|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I11, 5' end.DH961220|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,777,095 - 142,777,216)(14,478,658 - 14,479,431)
sequence
tttctttagccctgtaccccaattttaatggggttatttgattttctgga
gtcaatcttcttgagttctttatatatattggatattattcccctatctg
acttaggattggtaaagatcctttcccaatatgttgg
gaattcaactttaaaaactttgatactgagatatttaagtgtttctgtag
tgggaggcttataatgttgtatcagtgtttagatactgttcctgcatgaa
tatgtcctcactactttcttttagaggtatataccaaagatatgaccttc
cattgttagtgttaaatttgtcattgatgtgttgtagtttttgtagaatt
ctccattaaatatattctaccccatttgttatagactatatcagtatcct
agttatgctggtctgtcatattcttctacatttataagtgatattatttg
ccatatttaaaaaaataagatgatttaatcactctcccactctagtgtcc
atcttgtgattatataactttaaatattttctttagaattgcacattaag
aatatattttgttctaagagcattggaacaaaatcatagaaaatgaacta
ggggaaggactgaaggatctgaagggggtagctaccccttaggaagactg
gcaatatcaactagaccacccagagctccaaggtactaagccatcaaaaa
agaacataaatgagttcgtccatggtccacaatgtacatgtagcaaagga
ctgccttgtctgacctcagttggatgttatatgcttagtcctgtggagga
ttgatgccacagagaaggcagatgctagaggagagaggtggaagtgggtt
ggtgggtggggacagcaacctcctagaggcaaaatgatgtgaagatagga
tggggttatgaaataggggaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142777095_142777216
seq2: B6Ng01-170I11.b_68_188 (reverse)

seq1  CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  50
      |||||| |||||||||||||||||||| ||||||| |||||||||||| |
seq2  CCAACATATTGGGAAAGGATCTTTACCAATCCTAAGTCAGATAGGGGAAT  50

seq1  AATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  100
      ||||||||| ||||||||||||||||||||| | |||| |||||||||||
seq2  AATATCCAATATATATAAAGAACTCAAGAAGATTGACTCCAGAAAATCAA  100

seq1  ATAACCCCATTAAAAAATGGGG  122
      ||||||||||| |||| |||||
seq2  ATAACCCCATT-AAAATTGGGG  121

seq1: chr11_14478658_14479431
seq2: B6Ng01-170I11.g_67_840 (reverse)

seq1  ATGGT-CCCTCTTTCATGAACCCCTATCCTCTCTTCACTTCATTTTGCCT  49
      ||||| |||| |||||| |||||| ||||| ||||||| |||||||||||
seq2  ATGGTCCCCTATTTCAT-AACCCC-ATCCTATCTTCACATCATTTTGCCT  48

seq1  CTAAGAGGTTGCTGT-CCCACCCACCAACCCACTTCCACCTCTCTCCTCT  98
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGTTGCTGTCCCCACCCACCAACCCACTTCCACCTCTCTCCTCT  98

seq1  AGCATCTGCCTTCTCTGTGGCATCAATCCTCCACAGGACTAAGCATATAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCCTTCTCTGTGGCATCAATCCTCCACAGGACTAAGCATATAA  148

seq1  CATCCAACTGAGGTCAGACAAGGCAGTCCTTTGCTACATGTACATTGTGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACTGAGGTCAGACAAGGCAGTCCTTTGCTACATGTACATTGTGG  198

seq1  ACCATGGACGAACTCATTTATGTTCTTTTTTGATGGCTTAGTACCTTGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGACGAACTCATTTATGTTCTTTTTTGATGGCTTAGTACCTTGGA  248

seq1  GCTCTGGGTGGTCTAGTTGATATTGCCAGTCTTCCTAAGGGGTAGCTACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGTGGTCTAGTTGATATTGCCAGTCTTCCTAAGGGGTAGCTACC  298

seq1  CCCTTCAGATCCTTCAGTCCTTCCCCTAGTTCATTTTCTATGATTTTGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGATCCTTCAGTCCTTCCCCTAGTTCATTTTCTATGATTTTGTT  348

seq1  CCAATGCTCTTAGAACAAAATATATTCTTAATGTGCAATTCTAAAGAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCTCTTAGAACAAAATATATTCTTAATGTGCAATTCTAAAGAAAA  398

seq1  TATTTAAAGTTATATAATCACAAGATGGACACTAGAGTGGGAGAGTGATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAGTTATATAATCACAAGATGGACACTAGAGTGGGAGAGTGATT  448

seq1  AAATCATCTTATTTTTTTAAATATGGCAAATAATATCACTTATAAATGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCTTATTTTTTTAAATATGGCAAATAATATCACTTATAAATGTA  498

seq1  GAAGAATATGACAGACCAGCATAACTAGGATACTGATATAGTCTATAACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATGACAGACCAGCATAACTAGGATACTGATATAGTCTATAACA  548

seq1  AATGGGGTAGAATATATTTAATGGAGAATTCTACAAAAACTACAACACAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTAGAATATATTTAATGGAGAATTCTACAAAAACTACAACACAT  598

seq1  CAATGACAAATTTAACACTAACAATGGAAGGTCATATCTTTGGTATATAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACAAATTTAACACTAACAATGGAAGGTCATATCTTTGGTATATAC  648

seq1  CTCTAAAAGAAAGTAGTGAGGACATATTCATGCAGGAACAGTATCTAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAAGAAAGTAGTGAGGACATATTCATGCAGGAACAGTATCTAAAC  698

seq1  ACTGATACAACATTATAAGCCTCCCACTACAGAAACACTTAAATATCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACAACATTATAAGCCTCCCACTACAGAAACACTTAAATATCTCA  748

seq1  GTATCAAAGTTTTTAAAGTTGAATTC  774
      ||||||||||||||||||||||||||
seq2  GTATCAAAGTTTTTAAAGTTGAATTC  774