BAC Information

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BAC

Clone NameB6Ng01-173E23
Chromosome11 (Build37)
Map Location 13,241,337 - 13,242,014
singlet/doubletsinglet
Overlap genenone
Upstream geneCobl, LOC627244
Downstream geneLOC432535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173E23.bB6Ng01-173E23.g
ACCGA001688GA001689
length1,1871,053
definitionB6Ng01-173E23.b B6Ng01-173E23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggttgagaagtacctaaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
agattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcg
taaaactggatatactactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacatatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaaaggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacctaatcacaaa
ggaactcacatgatatgcactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactgaa
gaagaacgaagaccttcttataattgggaacaaaacacccatggaaggag
ttacagagacaaagtttggagctgtgtcaaaaggatggaccatctacatc
ctgccatatccagggttctatcccataatcagcttccaaacgctgaacac
cattgcatatactagcaagattttgctgaaaggacccatatatagttgtc
tcttgtgaggctatttcggggcctagcaaacaaagaagtggatgctcaca
gtcagctattgggatggatcacagggcccacaatggagagctagagaaag
taccccagtagctaaagggatctgcaccctatagtagacaacattatgaa
ctacaggtaccccggagctcttgactctagctgcatattgtatcaaagat
gactagcgccatcacttgcaaggaaggccattgacttgcagacctttata
tgcccagttacagggtatgccaggtcaacgtggagtcggctgggcttagg
gcgcatatcagctccagacgactcgatgcatgacgat

gaattctcattttagttctataccccatttttgaattagtttgttgttgt
tgttatcttcatgagataggattttagaacagattcctaattttcaggtg
tgttggtgcattcagggcttgctgtttgtaagagagctgggttctgatga
ggcctacatatattcgcttctgttgcttatgttgttgtgcttgtcactca
ccatgtgactatctctggtgtttgttggtctgtgtgactgtctggagtct
gcctcttttgtccctggattgcttcaggtctcctggtaggcctgcaacac
tggctgtatcacaccatgtgtaggaccttccaatggggggctctttagag
gggcagagaagctactgatctgttgcccttgctgcagtagatctcctggc
atgaggggggagtgcttcagactgtttggtctttggtgaagcagtcatgc
tgttgtcctatgtgaagatgttttccaagggggcctaagaactatggttt
ctgtttccaggtgtgcagcagaactccagggaggtttgcagtctgtcagg
tcaggtgccctgcttgccttcaagctgtggtgtcaactactctgattgca
gctgatcctctatgatggatcaaaatatggtgtctttgggagcagaccaa
ccagcagtcagctgctctgagtgcagtggatcctcaactgctctgaacat
agcagatcctctagcatagatatgttgtctttgctggaacagaccagcta
ggaatgtccccccaggagaaaggactctgaggaaagggcagaaggagagt
tttgggtgggtgataggtcctgaatacactggactcccagaggcagctct
ggaactggggggatgggcttcttttttgtttgtttgtttgttttgaatat
cactttattattgctttggaatttccatgcttagagagcatagtatgaca
attcaacacatgcaaacccttacatatattcaaatttggttaaggatatg
catctttttcattcatcatgtttttgtgtgagtgtccccccccgtggtag
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13241337_13242014
seq2: B6Ng01-173E23.g_439_1118

seq1  TGCCCTTGCTGCAGTAGATCTCCTGGCATGAGGGGGGAGTGCTTCAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTGCTGCAGTAGATCTCCTGGCATGAGGGGGGAGTGCTTCAGACT  50

seq1  GTTTGGTCTTTGGTGAAGCAGTCATGCTGTTGTCCTATGTGAAGATGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCTTTGGTGAAGCAGTCATGCTGTTGTCCTATGTGAAGATGTTT  100

seq1  TCCAAGGGGGCCTAAGAACTATGGTTTCTGTTTCCAGGTGTGCAGCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGGGCCTAAGAACTATGGTTTCTGTTTCCAGGTGTGCAGCAGAA  150

seq1  CTCCAGGGAGGTTTGCAGTCTGTCAGGTCAGGTGCCCTGCTTGCCTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGAGGTTTGCAGTCTGTCAGGTCAGGTGCCCTGCTTGCCTTCAA  200

seq1  GCTGTGGTGTCAACTACTCTGATTGCAGCTGATCCTCTATGATGGATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGTGTCAACTACTCTGATTGCAGCTGATCCTCTATGATGGATCAA  250

seq1  AATATGGTGTCTTTGGGAGCAGACCAACCAGCAGTCAGCTGCTCTGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTGTCTTTGGGAGCAGACCAACCAGCAGTCAGCTGCTCTGAGTG  300

seq1  CAGTGGATCCTCAACTGCTCTGAACATAGCAGATCCTCTAGCATAGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATCCTCAACTGCTCTGAACATAGCAGATCCTCTAGCATAGATAT  350

seq1  GTTGTCTTTGCTGGAACAGACCAGCTAGGAATGTCCCCCCAGGAGAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTTGCTGGAACAGACCAGCTAGGAATGTCCCCCCAGGAGAAAGG  400

seq1  ACTCTGAGGAAAGGGCAGAAGGAGAGTTTTGGGTGGGTGATAGGTCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGGAAAGGGCAGAAGGAGAGTTTTGGGTGGGTGATAGGTCCTGA  450

seq1  ATACACTGGACTCCCAGAGGCAGCTCTGGAACT-GGGGGATGGGCTTCTT  499
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATACACTGGACTCCCAGAGGCAGCTCTGGAACTGGGGGGATGGGCTTCTT  500

seq1  TTTTGTTTGTTTGTTTGTTTTGAATATCACTTTATTATTGCTTT-GAATT  548
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTTGTTTGTTTGTTTGTTTTGAATATCACTTTATTATTGCTTTGGAATT  550

seq1  TCCATGCTTAGAGAGCATAGTATGACAATTCAACACATGCAAA-CCTTAC  597
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCATGCTTAGAGAGCATAGTATGACAATTCAACACATGCAAACCCTTAC  600

seq1  ATAATATTCAAATTTGGTTAAGGATATGCATC-TTTTCATTCATCATGTT  646
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AT-ATATTCAAATTTGGTTAAGGATATGCATCTTTTTCATTCATCATGTT  649

seq1  TTTGTGTTGAGTGTCCCCCCCCTTGGTAGTTT  678
      |||||| ||||||||||||||| |||||||||
seq2  TTTGTG-TGAGTGTCCCCCCCCGTGGTAGTTT  680


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