BAC Information

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BAC

Clone NameB6Ng01-174C23
Chromosome11 (Build37)
Map Location 25,920,686 - 26,050,781
singlet/doubletdoublet
Overlap gene5730522E02Rik, LOC100042328
Upstream genenone
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174C23.bB6Ng01-174C23.g
ACCGA002336GA002337
length1,147973
definitionB6Ng01-174C23.b B6Ng01-174C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,920,686 - 25,921,682)(26,049,817 - 26,050,781)
sequence
gaattcttggtcaacttggctagggagtggcactattaggaggataagtg
tagaggaaatgtgtctggctttgaggtctcagaagctcaaactagaccta
gtgtggctcagtcttttcctgctgcctgtgaatcaagatgtagaaatctc
agcaatctctccgacatcatgtctgcctgtgttgctgtcatgtttcctgc
cataaccataatggactaatcctctgaactgtaagcccactccagtgaaa
ggttttcctttataagagttgctgcagtcatggtgtctcttcacagcaat
aaaatcctaactaagacagaagactttgttagctataagctccatacaca
taaaacacatcatgacaaggctatacaaaacaattcagtcttaaggatta
taaatagcagtagatttccaatattctagataatggtcccgctctactat
taaaagtatgatctataatattttgttttattctgattgctgtgtttaag
ataacacattacacaccaagctacacccaggaaaaaaaaacattaaataa
tatggaaattcgaaatcaagcatctgaattgactctggtgtgttatctgc
ataagggaaacgaaaaatgggaattatcatactgtcttcagtgtttctaa
aattcttcagtcagatctagaaagcagcatcttatgcagatgtagacata
acctctgagcagaagaacaattctaatgagggcatcattatactttatat
tcaacaaatatccaatacacctatgtatgaatttctatttacgtggacta
tatctactaatatttataatattttagatcaaagctaagaaatttaaact
attatttctttaaaataacaaatctgtagcattttcaatttaaatcattt
aatagaaaaaggaatgtagctttttagtttttgaaatctcttcaatgtca
tatttcataaagacatttatattctcaaatctacattaacatttcagttg
tgttagacgtcacatgtcatgttagcctccgggaagacttcactgtattt
tttcgttgcaaggctgcgattgaaaaggactaattgatgtgtgtgtaaat
ataaggaaaaacagccttggacatgagttcctggaaagagttttcaa

gaattcttgtgaagtaggaccacggtgaaggaccactggggttgggggag
aggagaaacctggttagctagtgaagatggttaaaatgtcattgcatgtc
ttagcacggatgatgtaaagacaacacagagtcccagtgtcaggctgttg
aaagagctcaggagtctggataaagctaggtcaaggagagaatcagtgtt
aaccctaagaactgttttgctacctgccaacaatcaacgtgtttgctttg
aatcataaaaccatactaactttattagtaagaattagctggtccaggtg
gctcataatctcagttacttgggaggatggcagcctgttccaaggggaat
tcaaggacagagtgggctatagagtgagaccctatttcaaaactgagacc
caagaatagcaacaacaaaaaatatgggattcattcaaaagataacaagt
attctagagtaaggctcatgctgctggttggtcaggagtcactggtatgg
gtgaagaagcgcctgtgcattgtaggtgacatgtgactatagtgccggct
gtttcgggtgactacactaacaacaaaacagtacaatgacattgtagcca
cacttcacaagagactttggaagtgcttttctgagactgccaacatccct
actatgcattcctcctgtagggggtacacgagctgatggtgtcctcagtt
cttacatgtgtaaagaaaagaggccaagggcagcgagtccacactgaagg
gcaggagcagaggtctcaggagctgtcctgtcacccaaactcttcctgca
tggatctcctgctttgggtgggaagcaggctatttaggagcccatctttt
tcacttttcattaactaggaaaagaaccccttccatctctgtcaggtggg
gcacaaccaaacactttctagtttatttcattggggaccaaaactattac
ataaagggggggaaaaggaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25920686_25921682
seq2: B6Ng01-174C23.b_185_1191

seq1  TAGAAATCTCAGCAATCTCTCCGACATCATGTCTGCCTGTGTTGCTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTCAGCAATCTCTCCGACATCATGTCTGCCTGTGTTGCTGTCA  50

seq1  TGTTTCCTGCCATAACCATAATGGACTAATCCTCTGAACTGTAAGCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTGCCATAACCATAATGGACTAATCCTCTGAACTGTAAGCCCAC  100

seq1  TCCAGTGAAAGGTTTTCCTTTATAAGAGTTGCTGCAGTCATGGTGTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGAAAGGTTTTCCTTTATAAGAGTTGCTGCAGTCATGGTGTCTCT  150

seq1  TCACAGCAATAAAATCCTAACTAAGACAGAAGACTTTGTTAGCTATAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCAATAAAATCCTAACTAAGACAGAAGACTTTGTTAGCTATAAGC  200

seq1  TCCATACACATAAAACACATCATGACAAGGCTATACAAAACAATTCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACACATAAAACACATCATGACAAGGCTATACAAAACAATTCAGTC  250

seq1  TTAAGGATTATAAATAGCAGTAGATTTCCAATATTCTAGATAATGGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATTATAAATAGCAGTAGATTTCCAATATTCTAGATAATGGTCCC  300

seq1  GCTCTACTATTAAAAGTATGATCTATAATATTTTGTTTTATTCTGATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACTATTAAAAGTATGATCTATAATATTTTGTTTTATTCTGATTGC  350

seq1  TGTGTTTAAGATAACACATTACACACCAAGCTACACCCAGGAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAAGATAACACATTACACACCAAGCTACACCCAGGAAAAAAAAA  400

seq1  CATTAAATAATATGGAAATTCGAAATCAAGCATCTGAATTGACTCTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATAATATGGAAATTCGAAATCAAGCATCTGAATTGACTCTGGTG  450

seq1  TGTTATCTGCATAAGGGAAACGAAAAATGGGAATTATCATACTGTCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTGCATAAGGGAAACGAAAAATGGGAATTATCATACTGTCTTCA  500

seq1  GTGTTTCTAAAATTCTTCAGTCAGATCTAGAAAGCAGCATCTTATGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTAAAATTCTTCAGTCAGATCTAGAAAGCAGCATCTTATGCAGA  550

seq1  TGTAGACATAACCTCTGAGCAGAAGAACAATTCTAATGAGGGCATCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACATAACCTCTGAGCAGAAGAACAATTCTAATGAGGGCATCATTA  600

seq1  TACTTTATATTCAACAAATATCCAATACACCTATGTATGAATTTCTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATATTCAACAAATATCCAATACACCTATGTATGAATTTCTATTT  650

seq1  ACGTGGACTATATCTACTAATATTTATAATATTTTAGATCAAAGCTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGACTATATCTACTAATATTTATAATATTTTAGATCAAAGCTAAGA  700

seq1  AATTTAAACTATTATTTCTTTAAAATAACAAATCTGTAGCATTTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAACTATTATTTCTTTAAAATAACAAATCTGTAGCATTTTCAATT  750

seq1  TAAATCATTTAATAGAAAAAGGAATGTAGC-TTTTAGTTTTTGAAATCTC  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAATCATTTAATAGAAAAAGGAATGTAGCTTTTTAGTTTTTGAAATCTC  800

seq1  TTCAATGTCATATTTCATAAAGACATTTATATTCTCAAATCTACATTAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTCATATTTCATAAAGACATTTATATTCTCAAATCTACATTAAC  850

seq1  A-TTCAG-TGTGTTAAGACGTCACATGTCATG-TAGCCTCC-GGAAGACT  895
      | ||||| |||||| ||||||||||||||||| |||||||| ||||||||
seq2  ATTTCAGTTGTGTT-AGACGTCACATGTCATGTTAGCCTCCGGGAAGACT  899

seq1  TCACTGTA--TTTTCG-TGCAA-GCTGCGAATGAAAAAGAC-AAATGATG  940
      ||||||||  |||||| ||||| ||||||| |||||| ||| || |||||
seq2  TCACTGTATTTTTTCGTTGCAAGGCTGCGATTGAAAAGGACTAATTGATG  949

seq1  TGTGTGT-AATATTAGG-AAAACAGCTTTGACCATGAAGGTCCCTGAAAG  988
      ||||||| ||||| ||| |||||||| |||  |||| || |||  |||||
seq2  TGTGTGTAAATATAAGGAAAAACAGCCTTGGACATG-AGTTCCTGGAAAG  998

seq1  AGTTTTCAA  997
      |||||||||
seq2  AGTTTTCAA  1007


seq1: chr11_26049817_26050781
seq2: B6Ng01-174C23.g_68_1040 (reverse)

seq1  CTCTTCCTTTT-CCCCCCTTTATGT-ATAGTTTTGGTCCCAATTGAAATA  48
      ||||||||||| ||||||||||||| |||||||||||||| | |||||| 
seq2  CTCTTCCTTTTCCCCCCCTTTATGTAATAGTTTTGGTCCCCAATGAAAT-  49

seq1  AAACTAG-AAGTGTTT-GTTGTG-CCCACCTGACAGAGGTGGAAGGGGTT  95
      ||||||| |||||||| |||||| |||||||||||||| |||||||||||
seq2  AAACTAGAAAGTGTTTGGTTGTGCCCCACCTGACAGAGATGGAAGGGGTT  99

seq1  CTTTTCCTAGTT-ATGAAAAGTG-AAAAGAT-GGCTCCTAAATAGCCTGC  142
      |||||||||||| |||||||||| ||||||| ||||||||||||||||||
seq2  CTTTTCCTAGTTAATGAAAAGTGAAAAAGATGGGCTCCTAAATAGCCTGC  149

seq1  TTCCCA-CCAAAGCAGGAGATCCATGCAGGAAGAGTTTGGGTGACAGGAC  191
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCCAAAGCAGGAGATCCATGCAGGAAGAGTTTGGGTGACAGGAC  199

seq1  AGCTCCTGAGACCTCTGCTCCTGCCCTTCAGTGTGGACTCGCTGCCCTTG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGAGACCTCTGCTCCTGCCCTTCAGTGTGGACTCGCTGCCCTTG  249

seq1  GCCTCTTTTCTTTACACATGTAAGAACTGAGGACACCATCAGCTCGTGTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTTCTTTACACATGTAAGAACTGAGGACACCATCAGCTCGTGTA  299

seq1  CCCCCTACAGGAGGAATGCATAGTAGGGATGTTGGCAGTCTCAGAAAAGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTACAGGAGGAATGCATAGTAGGGATGTTGGCAGTCTCAGAAAAGC  349

seq1  ACTTCCAAAGTCTCTTGTGAAGTGTGGCTACAATGTCATTGTACTGTTTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAAGTCTCTTGTGAAGTGTGGCTACAATGTCATTGTACTGTTTT  399

seq1  GTTGTTAGTGTAGTCACCCGAAACAGCCGGCACTATAGTCACATGTCACC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAGTGTAGTCACCCGAAACAGCCGGCACTATAGTCACATGTCACC  449

seq1  TACAATGCACAGGCGCTTCTTCACCCATACCAGTGACTCCTGACCAACCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGCACAGGCGCTTCTTCACCCATACCAGTGACTCCTGACCAACCA  499

seq1  GCAGCATGAGCCTTACTCTAGAATACTTGTTATCTTTTGAATGAATCCCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATGAGCCTTACTCTAGAATACTTGTTATCTTTTGAATGAATCCCA  549

seq1  TATTTTTTGTTGTTGCTATTCTTGGGTCTCAGTTTTGAAATAGGGTCTCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTGTTGTTGCTATTCTTGGGTCTCAGTTTTGAAATAGGGTCTCA  599

seq1  CTCTATAGCCCACTCTGTCCTTGAATTCCCCTTGGAACAGGCTGCCATCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGCCCACTCTGTCCTTGAATTCCCCTTGGAACAGGCTGCCATCC  649

seq1  TCCCAAGTAACTGAGATTATGAGCCACCTGGACCAGCTAATTCTTACTAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTAACTGAGATTATGAGCCACCTGGACCAGCTAATTCTTACTAA  699

seq1  TAAAGTTAGTATGGTTTTATGATTCAAAGCAAACACGTTGATTGTTGGCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAGTATGGTTTTATGATTCAAAGCAAACACGTTGATTGTTGGCA  749

seq1  GGTAGCAAAACAGTTCTTAGGGTTAACACTGATTCTCTCCTTGACCTAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAAAACAGTTCTTAGGGTTAACACTGATTCTCTCCTTGACCTAGC  799

seq1  TTTATCCAGACTCCTGAGCTCTTTCAACAGCCTGACACTGGGACTCTGTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCAGACTCCTGAGCTCTTTCAACAGCCTGACACTGGGACTCTGTG  849

seq1  TTGTCTTTACATCATCCGTGCTAAGACATGCAATGACATTTTAACCATCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTACATCATCCGTGCTAAGACATGCAATGACATTTTAACCATCT  899

seq1  TCACTAGCTAACCAGGTTTCTCCTCTCCCCCAACCCCAGTGGTCCTTCAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGCTAACCAGGTTTCTCCTCTCCCCCAACCCCAGTGGTCCTTCAC  949

seq1  CGTGGTCCTACTTCACAAGAATTC  965
      ||||||||||||||||||||||||
seq2  CGTGGTCCTACTTCACAAGAATTC  973


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