BAC Information

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BAC

Clone NameB6Ng01-175L18
Chromosome11 (Build37)
Map Location 10,569,231 - 10,570,261
singlet/doubletsinglet
Overlap genenone
Upstream geneAbca13, LOC665435, LOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175L18.bB6Ng01-175L18.g
ACCGA003461GA003462
length1,0741,183
definitionB6Ng01-175L18.b B6Ng01-175L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgaatagaattgaagacccagaaatgaacccacacacctatgg
ttacttgatcttcgacaagggagctaaaaccatccagtggaagaaagaca
gcattttcaacaattggtgctggcacaactggttgttatcgtgtagaaga
atgcaaatcgatccatacttatctccttgtactaaggtcaaatctaagtg
gatcaaggaacttcacataaaaccagaaacactgaaacttgtagaggaga
aagtggggaaaagccttgaagatatgggcacaggggaaaaattcctgaac
agaacagcaatggcttgtgctgtaagatcgagaattgacaaatgggacct
aatgaacctccaaagtttctgcaaggcaaaagacaccatcaataagacaa
aaagaccaccaacagattgggaaaggatctttacctatcctaaatcagat
aggggactaatatccaacatatataaagaactcaagaaggtggacttcag
aaaatcaaataaccccattaaaaaatggggctcagaatttatagactggt
tgcaactacaaggagtaaatgcaaatatgatagaaaagctaaatttctaa
atcaaagtattcctatgatattgttgaaaagattatccatacattgagtc
tttgttttagaatgttgaagaggattatacactttctgatattctcaatg
atatcataaaggaaattattcacatgaaaaaaaaccattctattactgaa
actatttggaggctcttaccatactcggaggcacctttggtaaaatattt
ttaagtgataaatcttgctttcttttgttagaatgtgtgcaatcttattt
ttatatatcagatctatcaagccttcttataaattttcaatcctgtattt
caccgccccaacagttacaataactacttcaattaatctagaatcatcta
cagggctcctttgaggaaagcttttctcagaagtacatcatgtcttgtga
agaatttatagccacctgaagcactcccctctcattcttctgcttatgtt
ttttaaatttcccccttccattct

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacacgatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccgggcccagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaaaggagctaagggatctgcaacccta
atagtggaacaacattatgagctaaccagtaccccggagctcttgactct
agctgcaattatatatcaaagatgacctagtccggccattcacttggaag
agaaggccattgggacttgcaactttatatgcctagtacaggggattaca
agtccataataagtgggtggtgtggtgtgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10569231_10570261
seq2: B6Ng01-175L18.b_92_1122 (reverse)

seq1  AGAATGGGAAGGGGGAAATTAAAAAAACATAAAGCAGAGAAAATGAGA-G  49
      ||||| |||||||||||||| ||||||||| ||||||| | ||||||| |
seq2  AGAAT-GGAAGGGGGAAATTTAAAAAACAT-AAGCAGA-AGAATGAGAGG  47

seq1  GGAGTGCTTTCAGT-GCTATAAATTCTTCAC-AGACATGATGTACTTCTT  97
      |||||||||   || |||||||||||||||| |||||||||||||||| |
seq2  GGAGTGCTTCAGGTGGCTATAAATTCTTCACAAGACATGATGTACTTC-T  96

seq1  GAGAAAAGCTTTCCTCAAAGGAGCCCTGTAGATGATTCTAGATTAATTGA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGCTTTCCTCAAAGGAGCCCTGTAGATGATTCTAGATTAATTGA  146

seq1  AGTAGTTATTGTAACTGTTGGGGCGGTGAAATACAGGATTGAAAATTTAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTATTGTAACTGTTGGGGCGGTGAAATACAGGATTGAAAATTTAT  196

seq1  AAGAAGGCTTGATAGATCTGATATAT-AAAATAAGATTGCACACATTCTA  246
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGAAGGCTTGATAGATCTGATATATAAAAATAAGATTGCACACATTCTA  246

seq1  ACAAAAGAAAGCAAGATTTATCACTTAAAAATATTTTACCAAAGGTGCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAAAGCAAGATTTATCACTTAAAAATATTTTACCAAAGGTGCCT  296

seq1  CCGAGTATGGTAAGAGCCTCCAAATAGTTTCAGTAATAGAATGGTTTTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTATGGTAAGAGCCTCCAAATAGTTTCAGTAATAGAATGGTTTTTT  346

seq1  TTCATGTGAATAATTTCCTTTATGATATCATTGAGAATATCAGAAAGTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGAATAATTTCCTTTATGATATCATTGAGAATATCAGAAAGTGT  396

seq1  ATAATCCTCTTCAACATTCTAAAACAAAGACTCAATGTATGGATAATCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTCTTCAACATTCTAAAACAAAGACTCAATGTATGGATAATCTT  446

seq1  TTCAACAATATCATAGGAATACTTTGATTTAGAAATTTAGCTTTTCTATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAATATCATAGGAATACTTTGATTTAGAAATTTAGCTTTTCTATC  496

seq1  ATATTTGCATTTACTCCTTGTAGTTGCAACCAGTCTATAAATTCTGAGCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCATTTACTCCTTGTAGTTGCAACCAGTCTATAAATTCTGAGCC  546

seq1  CCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTT  596

seq1  CTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAG  646

seq1  ATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGATGGTGTCTTT  696

seq1  TGCCTTGCAGAAACTTTGGAGGTTCATTAGGTCCCATTTGTCAATTCTCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGCAGAAACTTTGGAGGTTCATTAGGTCCCATTTGTCAATTCTCG  746

seq1  ATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTG  796

seq1  CCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTACAAGTTTCAGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTACAAGTTTCAGTGT  846

seq1  TTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTAC  896

seq1  AAGGAGATAAGTATGGATCGATTTGCATTCTTCTACACGATAACAACCAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATAAGTATGGATCGATTTGCATTCTTCTACACGATAACAACCAG  946

seq1  TTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGT  996

seq1  TTTAGCTCCCTTGTCGAAGATCAAGTAACCATAGG  1031
      |||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCCTTGTCGAAGATCAAGTAACCATAGG  1031


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