MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-180C06
Chromosome	11 (Build37)
Map Location	113,669,917 - 113,809,854
singlet/doublet	doublet
Overlap gene	Sdk2
Upstream gene	2610035D17Rik, Slc39a11, Sstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4
Downstream gene	LOC100041739, LOC634710, 4932435O22Rik, Rpl38, Ttyh2, Dnaic2, Kif19a, 1500005I02Rik, Gpr142, Gprc5c, Cd300a, Cd300lb
Link	Open Mouse BAC browser

Click to get alignment info.

name	2610035D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs

name	Slc39a11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69806 MGI:1917056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sstr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20606 MGI:98328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16834 MGI:1333873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu99e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28081 MGI:106351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu47e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:276852 MGI:106356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Ertd636e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cdc42ep4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56699 MGI:1929760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC634710 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	4932435O22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319819 MGI:2442791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rpl38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67671 MGI:1914921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ttyh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117160 MGI:2157091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnaic2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432611 MGI:2685574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif19a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:286942 MGI:2447024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 4 Proteins

name	1500005I02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72014 MGI:1919264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr142 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217302 MGI:2668437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gprc5c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70355 MGI:1917605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd300a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217303 MGI:2443411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd300lb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217304 MGI:2685099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610035D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390920 GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs product : RIKEN cDNA 2610035D17 gene transcript_id : XM_902349.2

name	Slc39a11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803321 GeneID:69806 MGI:1917056
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (metal ion transporter), member 11 transcript_id : NM_027216.4

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665702 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_009217.2

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665698 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_001042606.1

name	Cog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15011848 GeneID:16834 MGI:1333873
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : component of oligomeric golgi complex 1 transcript_id : NM_013581.2

name	D11Wsu99e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376716 GeneID:28081 MGI:106351
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 99, expressed transcript_id : NM_138598.3

name	D11Wsu47e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370490 GeneID:276852 MGI:106356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 47, expressed transcript_id : NM_177777.4

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536223 GeneID:52670 MGI:1277182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_026682.1

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536231 GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_029794.1

name	Cdc42ep4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910141 GeneID:56699 MGI:1929760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 4 transcript_id : NM_020006.1

name	Sdk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254253 GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sidekick homolog 2 (chicken) transcript_id : NM_172800.2

name	LOC100041739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262504 GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041739 transcript_id : XM_001476930.1

name	Rpl38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205439 GeneID:67671 MGI:1914921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L38 transcript_id : NM_001048058.1

name	Rpl38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205443 GeneID:67671 MGI:1914921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L38 transcript_id : NM_001048057.1

name	Rpl38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205438 GeneID:67671 MGI:1914921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L38 transcript_id : NM_023372.2

name	Ttyh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68989250 GeneID:117160 MGI:2157091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tweety homolog 2 (Drosophila) transcript_id : NM_053273.2

name	Dnaic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145545 GeneID:432611 MGI:2685574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein, axonemal, intermediate chain 2 transcript_id : NM_001034878.2

name	Kif19a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262559 GeneID:286942 MGI:2447024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 4 Proteins product : kinesin family member 19A transcript_id : XM_988580.2

name	1500005I02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388523 GeneID:72014 MGI:1919264
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500005I02 gene transcript_id : NM_028055.2

name	Gpr142 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32306533 GeneID:217302 MGI:2668437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 142 transcript_id : NM_181749.1

name	Gprc5c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354065 GeneID:70355 MGI:1917605
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor, family C, group 5, member C transcript_id : NM_147217.2

name	Cd300a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892370 GeneID:217303 MGI:2443411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD300A antigen transcript_id : NM_170758.3

name	Cd300lb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80978940 GeneID:217304 MGI:2685099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD300 antigen like family member B transcript_id : NM_199221.2

name	2610035D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390921 GeneID:72386 MGI:1919636
definition	codon_start : 1 product : hypothetical protein LOC72386 protein_id : XP_907442.2

name	Slc39a11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053868 GeneID:69806 MGI:1917056
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 39 (metal ion transporter), member 11 protein_id : NP_081492.3

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665703 CCDS:CCDS25598.1 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 2 product : somatostatin receptor 2 isoform B protein_id : NP_033243.2

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665699 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1 product : somatostatin receptor 2 isoform A protein_id : NP_001036071.1

name	Cog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15011849 CCDS:CCDS25599.1 GeneID:16834 MGI:1333873
definition	GO_component : GO:0017119 - Golgi transport complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEP] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence ISS]; GO:0006891 - intra-Golgi vesicle-mediated transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : ldlCp complex assembly note : low density lipoprotein B product : component of oligomeric golgi complex 1 protein_id : NP_038609.2

name	D11Wsu99e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070414 CCDS:CCDS25600.1 GeneID:28081 MGI:106351
definition	codon_start : 1 product : hypothetical protein LOC28081 protein_id : NP_613064.1

name	D11Wsu47e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982246 GeneID:276852 MGI:106356
definition	codon_start : 1 product : hypothetical protein LOC276852 protein_id : NP_808445.2

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536232 CCDS:CCDS25602.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC52670 isoform 2 protein_id : NP_084070.1

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536224 CCDS:CCDS25603.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC52670 isoform 1 protein_id : NP_080958.1

name	Cdc42ep4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910142 CCDS:CCDS25604.1 GeneID:56699 MGI:1929760
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008360 - regulation of cell shape [Evidence IEA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 note : binder of Rho GTPase 4 product : CDC42 effector protein (Rho GTPase binding) 4 protein_id : NP_064390.1

name	Sdk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254254 CCDS:CCDS25605.1 GeneID:237979 MGI:2443847
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : sidekick 2 protein_id : NP_766388.2

name	LOC100041739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262505 GeneID:100041739
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476980.1

name	Rpl38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205444 GeneID:67671 MGI:1914921
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : ribosomal protein L38 protein_id : NP_001041522.1

name	Rpl38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205440 GeneID:67671 MGI:1914921
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : ribosomal protein L38 protein_id : NP_001041523.1

name	Rpl38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963655 GeneID:67671 MGI:1914921
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : ribosomal protein L38 protein_id : NP_075861.1

name	Ttyh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68989251 CCDS:CCDS25608.1 GeneID:117160 MGI:2157091
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : tweety 2 protein_id : NP_444503.2

name	Dnaic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145546 GeneID:432611 MGI:2685574
definition	GO_component : GO:0005858 - axonemal dynein complex [Evidence ISS]; GO:0035085 - cilium axoneme [Evidence ISS] GO_function : GO:0003777 - microtubule motor activity [Evidence ISS] GO_process : GO:0042384 - cilium biogenesis [Evidence ISS] codon_start : 1 product : dynein, axonemal, intermediate polypeptide 2 protein_id : NP_001030050.2

name	Kif19a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390924 GeneID:286942 MGI:2447024
definition	codon_start : 1 product : kinesin family member 19A protein_id : XP_993674.1

name	1500005I02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037273 CCDS:CCDS25610.1 GeneID:72014 MGI:1919264
definition	codon_start : 1 product : hypothetical protein LOC72014 protein_id : NP_082331.1

name	Gpr142 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32306534 CCDS:CCDS25611.1 GeneID:217302 MGI:2668437
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR2 product : G protein-coupled receptor 142 protein_id : NP_861414.1

name	Gprc5c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267464 CCDS:CCDS25612.1 GeneID:70355 MGI:1917605
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005118 - sevenless binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 exception : mismatches in translation product : retinoic acid inducible protein 3 protein_id : NP_671750.1

name	Cd300a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25092741 CCDS:CCDS25613.1 GeneID:217303 MGI:2443411
definition	GO_component : GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0019902 - phosphatase binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : mast cell-derived paired immunoglobulin-like receptor 1; polymeric immunoglobulin receptor 4 product : CD300A antigen protein_id : NP_739564.1

name	Cd300lb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:80978941 CCDS:CCDS25614.1 GeneID:217304 MGI:2685099
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : CMRF-35-like molecule-7 product : CD300 antigen like family member B protein_id : NP_954691.2

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 1 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 2 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 3 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 4 pseudo : _no_value

name	4932435O22Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262558 GeneID:319819 MGI:2442791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 4932435O22 gene transcript_id : XR_035417.1

clone name	MSMg01-171K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-090P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-180C06.b	B6Ng01-180C06.g
ACC	GA006659	GA006660
length	805	404
definition	B6Ng01-180C06.b	B6Ng01-180C06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(113,669,917 - 113,670,458)	(113,809,446 - 113,809,854)
sequence	gaattctctcagatctcagatctgccttggttccagcatctgccctttcc cctatgaccttaccaggggatcaggagcaaaaagcctattttctggggtg actctaacccctgttgttagacagacactacactgcttactccctgggaa ttctaggggaatccagtgtgacactgaccaaaaagtggctttggacacct caggacaaggggatctgtcccctctctccttcctccatcctgcctggatc tagtccccacctctctctgtcatctcctccagactcagcccagaaggcag agccagtttttctttttatttctttttccctttccctttccctttccctt tctttctttctttctttctttctttctttctttctttctttctttctttc tttctttctttcttcctttctctttctttctttctttctttctttctttc tttctttctttctttctttctttctttctttcggttttttgagacagggt ttctttttatagtcctggctgtcctggaactcactttgtagaccaggctg gcctcgaactcagaaatccgcccttttgaaaattttatttgtttattttt atttcatgttcattggtgtttttgcttgcctgcatgcctgtgtgagagta tcaggtcccctgaaactggagtagcaggcagttacgagctgtcacgtggg tgctgaccattgaaccccgggtttttaagagccagtgctttttttttttt ttttttttttttgagacaggtttctctgtatagccctggctgtcctggaa ctcac	agcactcctcatacgttgaaagtccttattatgtatttgggtttatttct agaatctgagaccaccctttcatcaaacttagcataaagaccacactgtt tgagtgggtgcagttctgcttacactttaatagctagggtagtctttctc ccattgtccagacttttgtgttttggcttggttttagatttttaaaaaaa tatgttattttttaagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt gaacgcaggtaccccaaggaccagaagcatcaggtcctgtgttagttagg gttttactgctgtgaacagattccataaccaaggcaactcttataaggac aacatttaattggggccgagttacaagtttctgaggttcggtcccttatc atca
quality values	Open. Hide. 62 59 43 43 62 62 59 62 62 43 36 59 59 59 62 62 59 27 62 59 59 62 59 59 62 62 62 62 59 59 62 62 15 10 8 7 7 7 12 10 10 11 10 10 10 10 14 18 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 49 49 62 62 62 62 59 49 62 62 62 54 59 59 13 11 11 13 10 10 10 13 13 13 25 18 18 18 18 23 43 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 59 59 62 62 54 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 54 62 59 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 62 62 62 44 37 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 52 58 52 58 46 46 46 58 58 58 58 58 46 46 41 47 41 41 41 41 41 41 31 41 58 58 58 58 58 41 49 58 33 34 28 28 32 30 41 41 47 47 47 47 43 39 38 28 38 47 41 41 30 41 39 31 41 41 41 41 50 51 47 41 27 26 33 31 41 41 41 28 38 43 43 58 58 58 58 58 41 49 49 58 58 49 58 58 58 58 49 49 58 58 54 58 58 54 58 58 43 58 58 58 41 58 44 58 50 58 43 41 43 58 58 58 44 54 51 49 44 46 46 50 46 46 54 54 54 54 54 54 49 51 53 50 42 42 34 42 46 54 51 49 44 40 42 33 35 42 40 26 42 42 44 40 38 34 44 41 46 42 39 40 32 49 27 30 38 51 54 54 46 40 40 32 32 32 40 27 40 40 32 40 40 31 19 40 41 40 47 47 46 41 41 40 32 40 40 40 40 40 51 46 46 46 40 46 27 33 51 46 40 41 33 40 38 27 46 40 46 46 46 51 51 34 46 46 38 33 33 46 33 36 27 25 33 32 46 35 46 33 30 37 36 36 36 46 46 46 46 46 34 46 28 31 21 13 25 28 26 33 33 40 40 33 25 33 38 24 29 16 13 16 23 24 22 17 11 20 25 29 29 16 12 17 29 31 32 22 10 32 18 18 22 34 23 18 17 20 12 16 17 29 12 13 25 18 31 9 20 22 27 25 19 13 14 7 11 8 14 29 19 24 13 14 6 5 6 5 4 4 4 4 6 6 24 25 16 20 16 13 27 38 17 6 38 28 31 21 13 14 18 35 19 21 14 15 24 15 30 22 24 39 26 16 10 5 7 8 9 4 7 4 13 6 4 4 4 4 8 12 6 15 6 7 6 16 8 10 9 8 10 11 6 9 9 9 4 7 16 11 7 6 16 8 19 10 33 11 4 6 13 8 15 9 15 19 19 8 16 11 18 6 6 9 9 11 16	Open. Hide. 46 62 62 62 59 62 13 19 10 21 8 10 13 8 8 10 9 12 10 19 34 34 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 19 30 30 28 28 18 13 25 10 24 13 12 18 18 28 48 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 54 54 62 56 62 56 35 42 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 56 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 56 62 62 62 62 62 62 62 62 62 62 62 43 49 49 54 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 49 23 13 18 18 18 18 11 13 12 10 35 24 24 24 24 32 30 27 23 34 45 34 30 18 16 5 21 12 18 14 18 34 30 14 21 48 34 34 34 34 36 34 36 23 38 13 8 18 12 23 13 39 31 30 37 19 34 21 59 30 46 23 30 36 16 38 39 24 21 16 13 18 13 6 10 12 11 13 23 16 11 18 26 34 18 32 13 23 34 12 23 18 23 23 9 22 17 16 10 43 24 30 12 23 18 27 27 28 30 34 27 50 49 39 17 13 23 18 23 21 43 23 39 34 24 24 18 13 43 24 10 26 14 8 10 26 10 18 22 23 13 19 16 8 24 23 27 34 34 21 7 11 27 13 30 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_113669917_113670458
seq2: B6Ng01-180C06.b_44_848

seq1  GAATTCTCTCAGATCTCAGATCTGCCTTGGTTCCAGCATCTGCCCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGATCTCAGATCTGCCTTGGTTCCAGCATCTGCCCTTTCC  50

seq1  CCTATGACCTTACCAGGGGATCAGGAGCAAAAAGCCTATTTTCTGGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGACCTTACCAGGGGATCAGGAGCAAAAAGCCTATTTTCTGGGGTG  100

seq1  ACTCTAACCCCTGTTGTTAGACAGACACTACACTGCTTACTCCCTGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAACCCCTGTTGTTAGACAGACACTACACTGCTTACTCCCTGGGAA  150

seq1  TTCTAGGGGAATCCAGTGTGACACTGACCAAAAAGTGGCTTTGGACACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGGAATCCAGTGTGACACTGACCAAAAAGTGGCTTTGGACACCT  200

seq1  CAGGACAAGGGGATCTGTCCCCTCTCTCCTTCCTCCATCCTGCCTGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAGGGGATCTGTCCCCTCTCTCCTTCCTCCATCCTGCCTGGATC  250

seq1  TAGTCCCCACCTCTCTCTGTCATCTCCTCCAGACTCAGCCCAGAAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCCACCTCTCTCTGTCATCTCCTCCAGACTCAGCCCAGAAGGCAG  300

seq1  AGCCAGTTTTTCTTTTTATTTCTTTTTCCCTTTCCCTTTCCCTTTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTTTTTCTTTTTATTTCTTTTTCCCTTTCCCTTTCCCTTTCCCTT  350

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  400

seq1  TTTCTTTCTTTCTTCCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  450
      ||||||||||||||||||||        ||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTCCTTTC--------TCTTTCTTTCTTTCTTTCTTTC  442

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGGTTTTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGGTTTTTTGA  492

seq1  GACAGGGTTTCTTTTTATAGTCCTGGCTGTCCTGGAACTCAC--------  542
      ||||||||||||||||||||||||||||||||||||||||||        
seq2  GACAGGGTTTCTTTTTATAGTCCTGGCTGTCCTGGAACTCACTTTGTAGA  542

seq1  --------------------------------------------------  542
                                                        
seq2  CCAGGCTGGCCTCGAACTCAGAAATCCGCCCTTTTGAAAATTTTATTTGT  592

seq1  --------------------------------------------------  542
                                                        
seq2  TTATTTTTATTTCATGTTCATTGGTGTTTTTGCTTGCCTGCATGCCTGTG  642

seq1  --------------------------------------------------  542
                                                        
seq2  TGAGAGTATCAGGTCCCCTGAAACTGGAGTAGCAGGCAGTTACGAGCTGT  692

seq1  --------------------------------------------------  542
                                                        
seq2  CACGTGGGTGCTGACCATTGAACCCCGGGTTTTTAAGAGCCAGTGCTTTT  742

seq1  --------------------------------------------------  542
                                                        
seq2  TTTTTTTTTTTTTTTTTTTTGAGACAGGTTTCTCTGTATAGCCCTGGCTG  792

seq1  -------------  542
                   
seq2  TCCTGGAACTCAC  805

seq1: chr11_113809446_113809854
seq2: B6Ng01-180C06.g_65_474 (reverse)

seq1  TGATGATAAGGGACCGAACCTCTG-AACCTGTAACTCGGCCCCAATTAAA  49
      |||||||||||||||||||||| | ||| |||||||||||||||||||||
seq2  TGATGATAAGGGACCGAACCTCAGAAACTTGTAACTCGGCCCCAATTAAA  50

seq1  TGTTGTCCTTATAAGAGTTGCCTTGGTTATGGTATCTGTTCACAGCAGTA  99
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTGTCCTTATAAGAGTTGCCTTGGTTATGGAATCTGTTCACAGCAGTA  100

seq1  AAACCCTAACTAACACAGGACCTGATGCTTCTGGTCCTTGGGGTACCTGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAACCCTAACTAACACAGGACCTGATGCTTCTGGTCCTTGGGGTACCTGC  150

seq1  GTTCACACACACACACACACACACACACACACACACCACTTAAAAAATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACACACACACACACACACACACACACACACACCACTTAAAAAATAA  200

seq1  CATATTTTTTTAAAAATCTAAAACCAAGCCAAAACACAAAAGTCTGGACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTTTAAAAATCTAAAACCAAGCCAAAACACAAAAGTCTGGACA  250

seq1  ATGGGAGAAAGACTACCCTAGCTATTAAAGTGTAAGCAGAACTGCACCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGAAAGACTACCCTAGCTATTAAAGTGTAAGCAGAACTGCACCCA  300

seq1  CTCAAACAGTGTGGTCTTTATGCTAAGTTTGATGAAAGGGTGGTCTCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACAGTGTGGTCTTTATGCTAAGTTTGATGAAAGGGTGGTCTCAGA  350

seq1  TTCTAGAAATAAACCCAAATACATAATAAGGACTTTCAACGTATGAGGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAATAAACCCAAATACATAATAAGGACTTTCAACGTATGAGGAG  400

seq1  TGCTGAATTC  409
      ||||||||||
seq2  TGCTGAATTC  410

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information