BAC Information

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BAC

Clone NameB6Ng01-181B10
Chromosome11 (Build37)
Map Location 102,244,987 - 102,245,930
singlet/doubletsinglet
Overlap genenone
Upstream geneAarsd1, 1700113I22Rik, Rundc1, Rpl27, Ifi35, Vat1, Rnd2, Brca1, Nbr1, Tmem106a, LOC667306, Rdm1, Arl4d, LOC100038842, Dhx8, Etv4, Meox1, LOC194960, Sost, Dusp3, 1700006E09Rik, Mpp3, Cd300lg, Mpp2, Ppy, Pyy, LOC100040687, LOC666411, Nags, Tmem101, Lsm12, G6pc3, Hdac5, BC030867, Asb16, 2010008E23Rik, Ubtf, Slc4a1
Downstream geneRap2ip, Slc25a39, Grn, BC025575, Itga2b, Mdk-ps1, LOC100040792, Fzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap, 3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2, Fmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik, Plekhm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181B10.bB6Ng01-181B10.g
ACCGA007344GA007345
length9491,105
definitionB6Ng01-181B10.b B6Ng01-181B10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctggcagatactggtgtctgacacacaggtcatcagacaca
gggctaactctaatccatccatccatccatctatccatccacccatccat
ccatccatccatccatccatccatccatccatccatccatctgcttgctt
tccccacacaagtcctgctttcattctccagtcttgtttcttcccatcag
tcaagccactggctactgcttgtagttggtgatctgtccttagcttagat
cactttgtccttctgcccagtgctgataacacaggtcctattgcttgaag
ttccggtcccccagagggttctcctcaccagtgcctttgagggcaccaat
tctttgagccttagtgtgtgaagcagacctgatgctttccctctctgtca
gctgctaacagagatcaccaagcagcctgactcaagagttgtgggggagg
agagggtccagcagagggtggtctggactctgtctccctgctcacttaat
ttgcttgtgccctttccagttgctcaggtctcatgttggatgtgacatct
tatggagttactgctgaaaccacccaaccttatgacttcttatttctgaa
gaacacagctcattatgggcaaactccagtcatcatgacaatgattgagc
ctcagtagcatatcaggtagaccaggttttctctctctctctctctctcc
cttccttcttttcctttcttaatttcttaaatcatgatcttgctgtgtag
ctcagcctgcaactcacgatgacacccctgccttactcccccaggagtga
ggaggcttacaggcatggctacaccagatttttctttctttctttccttt
ttcctttttccttttctttcttttttcttttttttttaagtgctcttctt
actggcagatggtagtggcccattcccagagccttccggggtttccaga
gaattcaagcaggtcaggaatcagctgatgcagaggccatggagggatgt
tcattactggcttgcttcccctggcttgcccagcctgctctcttacagaa
ccaagactaccagcccagagatggcaccacccacaaggggcctttccccc
ttgatcactaattgagaaaatgccttacagttggagctcatggaggcatt
tcctcaactgaagctcctttctctgtgataactccagctgtgtcaagtta
acacaaaagtagccaatccatacaccaagtgctttagccttatcagccag
cagttctcacccttcctaatgctgtgactcttttacacagttcctcatgt
tgtggtgagcccacccccccaccacataattatttttgttgttacttcat
agctgtagttttgctgttacaagttataatgtaaatatgtttccaaaggt
cttaggtgacttcacccctgtgaaaaggtcatttgaccccccccttcaaa
aaaaaaaaaaaaggttgcaacccacttgttgagaatactgttgtaagcca
tcaagacagccttcatcagcgttgttaggggtggagatggagctgaatag
tagagtgcttgcttagaatttaaaaggctctaggtttaatttccctagaa
ccataacaacattcatttctttctttttcaaaaactcctggatgttgaac
tctgacctccacatatgtggcactgcactttgatgaatgcacaagcacgc
acatataataaggaaacaatttttttttttggaaagaaatactgtttatg
aaagtaaaagggtgggctgggagagatggatcagatggctcactgactgc
tctttccagaggtctcaggttcagttcccagcatctacattgacaaagaa
gaaagtaaaaggaccacagttgagtcagtttaagcacaggatgtcacaag
tggttcataaatggtttagttaacattagttgtaagggagaagaggtcag
attctagtttagtcctctttagcccttttttttttttatcttttatgttt
caagaacagggtatctgcgtagaccctgctgggtcctagaacctcatctc
tgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_102244987_102245930
seq2: B6Ng01-181B10.b_47_995

seq1  GAATTCTTCCTGGCAGATACTGGTGTCTGACACACAGGTCTTCAGACACA  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAATTCTTCCTGGCAGATACTGGTGTCTGACACACAGGTCATCAGACACA  50

seq1  GGGCTAACTCTAATCCATCCATCCATCCATCTATCCATCCACCCATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAACTCTAATCCATCCATCCATCCATCTATCCATCCACCCATCCAT  100

seq1  CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTGCTTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTGCTTGCTT  150

seq1  TCCCCACACAAGTCCTGCTTTCATTCTCCAGTCTTGTTTCTTCCCATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACACAAGTCCTGCTTTCATTCTCCAGTCTTGTTTCTTCCCATCAG  200

seq1  TCAAGCCACTGGCTACTGCTTGTAGTTGGTGATCTGTCCTTAGCTTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCACTGGCTACTGCTTGTAGTTGGTGATCTGTCCTTAGCTTAGAT  250

seq1  CACTTTGTCCTTCTGCCCAGTGCTGATAACACAGGTCCTATTGCTTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTCCTTCTGCCCAGTGCTGATAACACAGGTCCTATTGCTTGAAG  300

seq1  TTCCGGTCCCCCAGAGGGTTCTCCTCACCAGTGCCTTTGAGGGCACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGTCCCCCAGAGGGTTCTCCTCACCAGTGCCTTTGAGGGCACCAAT  350

seq1  TCTTTGAGCCTTAGTGTGTGAAGCAGACCTGATGCTTTCCCTCTCTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGCCTTAGTGTGTGAAGCAGACCTGATGCTTTCCCTCTCTGTCA  400

seq1  GCTGCTAACAGAGATCACCAAGCAGCCTGACTCAAGAGTTGTGGGGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAACAGAGATCACCAAGCAGCCTGACTCAAGAGTTGTGGGGGAGG  450

seq1  AGAGGGTCCAGCAGAGGGTGGTCTGGACTCTGTCTCCCTGCTCACTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCCAGCAGAGGGTGGTCTGGACTCTGTCTCCCTGCTCACTTAAT  500

seq1  TTGCTTGTGCCCTTTCCAGTTGCTCAGGTCTCATGTTGGATGTGACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTGCCCTTTCCAGTTGCTCAGGTCTCATGTTGGATGTGACATCT  550

seq1  TATGGAGTTACTGCTGAAACCACCCAACCTTATGACTTCTTATTTCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGTTACTGCTGAAACCACCCAACCTTATGACTTCTTATTTCTGAA  600

seq1  GAACACAGCTCATTATGGGC-AACTCCAGTCATCATGACAATGATTGAGC  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAACACAGCTCATTATGGGCAAACTCCAGTCATCATGACAATGATTGAGC  650

seq1  CTCAGTAGCATATCAGGTAGACCAGGTTTTCTCTCTCTCTCTCTCTCTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGCATATCAGGTAGACCAGGTTTTCTCTCTCTCTCTCTCTCTCC  700

seq1  CTTCCTTC-TTTCCTTTCTTAATTTCTT-AATCATGATCTTGCTGTGTAG  747
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  CTTCCTTCTTTTCCTTTCTTAATTTCTTAAATCATGATCTTGCTGTGTAG  750

seq1  CTCAGCCTGCAACTCACGATGACACCCCTGCCTTACTCCCCCAGGAGTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTGCAACTCACGATGACACCCCTGCCTTACTCCCCCAGGAGTGA  800

seq1  GGAGGCTTACAGGCATGGCTACACCAGATTTTTTCTTTCTTTCTTTCCTT  847
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGAGGCTTACAGGCATGGCTACACCAGA-TTTTTCTTTCTTTCTTTCCTT  849

seq1  TTTTCCTTTTCCTTTTCTTTCTTTTTTCTTTTTTTTTTAAGTGCTC-TCT  896
      ||| | |||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCCTTTTTCCTTTTCTTTCTTTTTTCTTTTTTTTTTAAGTGCTCTTCT  899

seq1  CACT-GCAGATGGTA-TGGCCTCATT-CCAGAGCCTTCTGGGTTTTCCAG  943
       ||| |||||||||| ||||| |||| ||||||||||| ||| |||||||
seq2  TACTGGCAGATGGTAGTGGCC-CATTCCCAGAGCCTTCCGGGGTTTCCAG  948

seq1  A  944
      |
seq2  A  949