BAC Information

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BAC

Clone NameB6Ng01-182D21
Chromosome11 (Build37)
Map Location 17,553,791 - 17,701,072
singlet/doubletdoublet
Overlap genenone
Upstream geneEgfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748
Downstream geneEtaa1, LOC327871, LOC627696, LOC627716, LOC665796
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182D21.bB6Ng01-182D21.g
ACCGA008190GA008191
length939253
definitionB6Ng01-182D21.b B6Ng01-182D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,700,471 - 17,701,072)(17,553,791 - 17,554,043)
sequence
gaattcaaacaagaattttggataccctgaatctggagttgcggatgagg
agggctcctaccccaacaatcttagttgaagagtagacatgctacacaac
tttaagaacaatgaccccaggaatagacaagcagagtccagtggtctgtg
acaaatgagcaaaggtagtataatggactggtcttttcaacagacagtgc
tggcacaattagatatttgtgtgcttagaaaacattctagacgtaaggtt
aatgtgtttcacaaaaattaattcataatacattgcaaacttaaatgtaa
aactgaaaaactaaaatttctagaagatagtatgataaatacattaagca
acattggttctagtggtgaccttctagctacaatgttgaatagaccacct
acaaaagaaatgattgataaggtgtattttcttataatttaacactatat
tctgtgatgggtagtgtcaaaaggattcaaagaaaagcataagatgagaa
aatatttacaaaatatgtttaatagatacatgttatccagaattacaagg
aactttttaaactcaatggtgaaccactaattttcaaagaatgggaaaaa
atcctgcatattagtccaaagagtatatttagaaagtaaaaaatataaaa
atgttgcttaagcttcagataccactagggaatttcaaattaaaagcatc
acacccctatctgaatggtgccaatctgtaggccagtgatacatacctct
gaggaggaagtagacccatggcaatgcttggtatttctgatggatgagct
ttggtttgatctctgtgaaagacagtgaagtatcttgatgctatgttaaa
cagtgttatatagccaagcaatcccaaataaactgaaaatgcctattgtc
ccgaatcttcctcaaagatgtttctttatttcatatttt
caatctaccaatgaccattgaagttcttatcaattaatcaattttgcaga
aggtccaatgtaaaggaatgttttttcctagaacattcatgttctctctg
tctctctccgctctttgtctctctctttgtgcatgtgtgattgtgtatgt
gtgtgtgtgtgtgtgtgtgataagggtaaaaccagaaagtaatctctcca
tatggggcagaaaggtaaatagtgggaggggaaaggatggcagtgaagga
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17700471_17701072
seq2: B6Ng01-182D21.b_41_642 (reverse)

seq1  ATTTTTTCCCATTCTTTGAAAATTAGTGGTTCACCATTGAGTTTAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCCATTCTTTGAAAATTAGTGGTTCACCATTGAGTTTAAAAAG  50

seq1  TTCCTTGTAATTCTGGATAACATGTATCTATTAAACATATTTTGTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTAATTCTGGATAACATGTATCTATTAAACATATTTTGTAAATA  100

seq1  TTTTCTCATCTTATGCTTTTCTTTGAATCCTTTTGACACTACCCATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCATCTTATGCTTTTCTTTGAATCCTTTTGACACTACCCATCACA  150

seq1  GAATATAGTGTTAAATTATAAGAAAATACACCTTATCAATCATTTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTGTTAAATTATAAGAAAATACACCTTATCAATCATTTCTTTT  200

seq1  GTAGGTGGTCTATTCAACATTGTAGCTAGAAGGTCACCACTAGAACCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGTCTATTCAACATTGTAGCTAGAAGGTCACCACTAGAACCAAT  250

seq1  GTTGCTTAATGTATTTATCATACTATCTTCTAGAAATTTTAGTTTTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTAATGTATTTATCATACTATCTTCTAGAAATTTTAGTTTTTCAG  300

seq1  TTTTACATTTAAGTTTGCAATGTATTATGAATTAATTTTTGTGAAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTTAAGTTTGCAATGTATTATGAATTAATTTTTGTGAAACACA  350

seq1  TTAACCTTACGTCTAGAATGTTTTCTAAGCACACAAATATCTAATTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTACGTCTAGAATGTTTTCTAAGCACACAAATATCTAATTGTGC  400

seq1  CAGCACTGTCTGTTGAAAAGACCAGTCCATTATACTACCTTTGCTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGTCTGTTGAAAAGACCAGTCCATTATACTACCTTTGCTCATTT  450

seq1  GTCACAGACCACTGGACTCTGCTTGTCTATTCCTGGGGTCATTGTTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGACCACTGGACTCTGCTTGTCTATTCCTGGGGTCATTGTTCTTA  500

seq1  AAGTTGTGTAGCATGTCTACTCTTCAACTAAGATTGTTGGGGTAGGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTGTAGCATGTCTACTCTTCAACTAAGATTGTTGGGGTAGGAGCC  550

seq1  CTCCTCATCCGCAACTCCAGATTCAGGGTATCCAAAATTCTTGTTTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCATCCGCAACTCCAGATTCAGGGTATCCAAAATTCTTGTTTGAAT  600

seq1  TC  602
      ||
seq2  TC  602

seq1: chr11_17553791_17554043
seq2: B6Ng01-182D21.g_70_322

seq1  CAATCTACCAATGACCATTGAAGTTCTTATCAATTAATCAATTTTGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTACCAATGACCATTGAAGTTCTTATCAATTAATCAATTTTGCAGA  50

seq1  AGGTCCAATGTAAAGGAATGTTTTTTCCTAGAACATTCATGTTCTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAATGTAAAGGAATGTTTTTTCCTAGAACATTCATGTTCTCTCTG  100

seq1  TCTCTCTCCGCTCTTTGTCTCTCTCTTTGTGCATGTGTGATTGTGTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCGCTCTTTGTCTCTCTCTTTGTGCATGTGTGATTGTGTATGT  150

seq1  GTGTGTGTGTGTGTGTGTGATAAGGGTAAAACCAGAAAGTAATCTCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGATAAGGGTAAAACCAGAAAGTAATCTCTCCA  200

seq1  TATGGGGCAGAAAGGTAAATAGTGGGAGGGGAAAGGATGGCAGTGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCAGAAAGGTAAATAGTGGGAGGGGAAAGGATGGCAGTGAAGGA  250

seq1  TGA  253
      |||
seq2  TGA  253