BAC Information

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BAC

Clone NameB6Ng01-182N13
Chromosome11 (Build37)
Map Location 10,960,784 - 11,048,681
singlet/doubletdoublet
Overlap geneVwc2
Upstream geneLOC382483
Downstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N13.bB6Ng01-182N13.g
ACCGA008626GA008627
length860277
definitionB6Ng01-182N13.b B6Ng01-182N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,048,139 - 11,048,681)(10,960,784 - 10,961,060)
sequence
gaattcttgtaaaccatcccctaatgaataaaggagtcaattacttggct
agtaggcgggacttccgggctggataggcgaagagaggaagaggagagat
atatattgagagagggccttttggacagggatagtgtgaggacaagaggt
agctcctagtgtctcccagtttcaatggcagatccgccaggatttgccac
cagaggatttagatttaataaggcttacaagactaggattttagtcgggc
ggtggtggcgcatgcctttaatcccagcacttgggaggcagaggcaggtg
gatttctgagttcgaggccagcctggccttcagagtgcgtttcaggatat
ccagggctacacagagtaaccctgtcttgaaaaacaagactaggatttta
gttgttgcacccagtgattgagttatttttatttctgaactaaatttgtt
ttgtgttttccttcatgcagtagctcgtctaggttaaccacaaaggccag
ggaggatttgaagcacagggtttgtagcaacccgccagtgggaacttagc
catctaggtagagagattttggagctctgagtcagagagtctccacgaga
taagaactggaaagaaaacacatggtgggactcgtacatatgtagtagaa
aatggcctagttggtaatcagtggggggagagtcccttggtcctgtgaag
gtactatgcattggaaacatggcattggctcaccaaccctggaaaagctc
atctagttactacatcgagtatctttgagaaccatgaaaagtaacacaga
agtaaaattatctgaccaggtgggagaagaaatataaatgagattggggt
ggggtttggg

agtgatcagaggcagagagaagaaggaatagtaaagaagacttagagata
agaaattttggaagcaaagaacaaaaaatgctcagagataaagggatttt
cagatcatttgcttgtgaaatccaagaagttgttacaatctttggggatt
tggaaatcaaaatgtaccattttctgctcaatgagtttgtattgagacca
aatcatattgcatttctgaaaagcagtaaggcttaatgagtggttatagg
gaattggagagaggggattgggaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11048139_11048681
seq2: B6Ng01-182N13.b_361_904 (reverse)

seq1  CCCCAACCCCACCCC-ATCTCATTTATATTTCTTCTCCCACCTGGTCAGA  49
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCAAACCCCACCCCAATCTCATTTATATTTCTTCTCCCACCTGGTCAGA  50

seq1  TAATTTTACTTCTGTGTTACTTTTCATGGTTCTCAAAGATACTCGATGTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTACTTCTGTGTTACTTTTCATGGTTCTCAAAGATACTCGATGTA  100

seq1  GTAACTAGATGAGCTTTTCCAGGGTTGGTGAGCCAATGCCATGTTTCCAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTAGATGAGCTTTTCCAGGGTTGGTGAGCCAATGCCATGTTTCCAA  150

seq1  TGCATAGTACCTTCACAGGACCAAGGGACTCTCCCCCCACTGATTACCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTACCTTCACAGGACCAAGGGACTCTCCCCCCACTGATTACCAA  200

seq1  CTAGGCCATTTTCTACTACATATGTACGAGTCCCACCATGTGTTTTCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATTTTCTACTACATATGTACGAGTCCCACCATGTGTTTTCTTT  250

seq1  CCAGTTCTTATCTCGTGGAGACTCTCTGACTCAGAGCTCCAAAATCTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTTATCTCGTGGAGACTCTCTGACTCAGAGCTCCAAAATCTCTC  300

seq1  TACCTAGATGGCTAAGTTCCCACTGGCGGGTTGCTACAAACCCTGTGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGATGGCTAAGTTCCCACTGGCGGGTTGCTACAAACCCTGTGCTT  350

seq1  CAAATCCTCCCTGGCCTTTGTGGTTAACCTAGACGAGCTACTGCATGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTCCCTGGCCTTTGTGGTTAACCTAGACGAGCTACTGCATGAAG  400

seq1  GAAAACACAAAACAAATTTAGTTCAGAAATAAAAATAACTCAATCACTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACAAAACAAATTTAGTTCAGAAATAAAAATAACTCAATCACTGG  450

seq1  GTGCAACAACTAAAATCCTAGTCTTGTTTTTCAAGACAGGGTTACTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAACAACTAAAATCCTAGTCTTGTTTTTCAAGACAGGGTTACTCTGT  500

seq1  GTAGCCCTGGATATCCTGAAACGCACTCTGAAGGCCAGGCTGGC  543
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGGATATCCTGAAACGCACTCTGAAGGCCAGGCTGGC  544


seq1: chr11_10960784_10961060
seq2: B6Ng01-182N13.g_74_350

seq1  AGTGATCAGAGGCAGAGAGAAGAAGGAATAGTAAAGAAGACTTAGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCAGAGGCAGAGAGAAGAAGGAATAGTAAAGAAGACTTAGAGATA  50

seq1  AGAAATTTTGGAAGCAAAGAACAAAAAATGCTCAGAGATAAAGGGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTGGAAGCAAAGAACAAAAAATGCTCAGAGATAAAGGGATTTT  100

seq1  CAGATCATTTGCTTGTGAAATCCAAGAAGTTGTTACAATCTTTGGGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATTTGCTTGTGAAATCCAAGAAGTTGTTACAATCTTTGGGGATT  150

seq1  TGGAAATCAAAATGTACCATTTTCTGCTCAATGAGTTTGTATTGAGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATCAAAATGTACCATTTTCTGCTCAATGAGTTTGTATTGAGACCA  200

seq1  AATCATATTGCATTTCTGAAAAGCAGTAAGGCTTAATGAGTGGTTATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATTGCATTTCTGAAAAGCAGTAAGGCTTAATGAGTGGTTATAGG  250

seq1  GAATTGGAGAGAGGGGATTGGGAAAGA  277
      |||||||||||||||||||||||||||
seq2  GAATTGGAGAGAGGGGATTGGGAAAGA  277


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