BAC Information

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BAC

Clone NameB6Ng01-182P01
Chromosome11 (Build37)
Map Location 5,712,140 - 5,713,018
singlet/doubletsinglet
Overlap genenone
Upstream geneNf2, Nipsnap1, Thoc5, Nefh, Ap1b1, Rasl10a, Gas2l1, Ewsr1, Rhbdd3, Emid1, Kremen1, Znrf3, LOC100042016, LOC382478, Xbp1, Ccdc117, LOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2
Downstream genePolm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P01.bB6Ng01-182P01.g
ACCGA008696GA008697
length500886
definitionB6Ng01-182P01.b B6Ng01-182P01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaaatggatgcatctggagggcatcatcct
gagtgaggtaacccaatcacaaaagaacacacatgatatgtactcactga
taagtgaatattagcccagaaacttagaatacccaagatacaatttgcaa
aacacatgaaactcaagaagaaggaagaccaacgtgtggatactttgttc
cttctgagaatggggaacaaaatacccatggaaggagttacagaaacaaa
gttcggagctgagaaggaaggatggaccatccagagactgccccacccag
ggatccataccatatacaactatcaaacccagacactattgcatatgcca
gaaagattttgctgataagaccctgatacagctatctcttgtgaggctat
gctaatgcctggcaaatacagaagtggatgctcacagtcatctattggat
ggaacacaggcccccaatggaggagctagagaaagtgcccaaggagctaa

attctttctttttttctttctttaaagatttatttatttatttatttatt
tatttatttatttatttatttatttaatgtatgtgagtacactgtcgctg
tcttctgacacaccagaagagggcactggatcccattacggatggttgtg
agccaccatgtagttgctgggatttgaactcaggacctctggaagagcag
ccagtgctcctaaccgctgagccatctctccagccccccacttctttctt
tcttgagacaggatctcactgcgcagtcctgactgggtctgtaacttgct
atttagatcaccagtctgacctcagattcacaagaaccacttcctctgcc
tgggtgctgggcttagaggtgtgtgccaccatatccagcaaagggattcg
ttcaccaaaggtctaaagtcccgaatcgaatttccttagcatctatagga
tgatgctagttttatcttcttgggtattgatagtctgtggcttctaaagc
catgggtctgtttttgttaaaagtgttcatgcatgtagagtgttaatgct
tttggttttccgtggctgcggttggtctgcccatctctctttcccaggtt
ggtgagtgtctttgtcctctcccagtctccttgcatttctttcttcattg
cttttccttcccttgtttacttcatcagtttctctattatcttctttgca
atggaaactgagttgaggcgagcccttccctcttaagtgagcatgtggca
ttctcagtctcccttgatcgtgagctttgctacctcacagttgctacact
gtattgtgggggaaaatcaggttttttccatcacctttagcctgtttttt
tttttttttttatatataatttgggagtttacttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_5712140_5713018
seq2: B6Ng01-182P01.g_63_948 (reverse)

seq1  TAAAGTAAACTCCAA----ATATATATAAAAAAAAAAAAAAACAGACTAA  46
      ||||||||||||| |    ||||||| |||||||||||||||||| ||||
seq2  TAAAGTAAACTCCCAAATTATATATAAAAAAAAAAAAAAAAACAGGCTAA  50

seq1  A-GTGATGGAAAAAACCTGA-TTTCCCCCACAATACAGTGTAGCAACTGT  94
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGTGATGGAAAAAACCTGATTTTCCCCCACAATACAGTGTAGCAACTGT  100

seq1  GAGGTAGCAAAGCTCACGATCAAGGGAGACTGAGAATGCCACATGCTCAC  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGCAAAGCTCACGATCAAGGGAGACTGAGAATGCCACATGCTCAC  150

seq1  TTAAGAGGGAA-GGCTCGCCTCAACTCAGTTTCCATTGCAAAGAAGATAA  193
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGGAAGGGCTCGCCTCAACTCAGTTTCCATTGCAAAGAAGATAA  200

seq1  TAGAGAAACTGATGAAGTAAACAAGGGAAGGAAAAGCAATGAAGAAAGAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAACTGATGAAGTAAACAAGGGAAGGAAAAGCAATGAAGAAAGAA  250

seq1  ATGCAAGGAGACTGGGAGAGGACAAAGACACTCACCAACCTGGGAAAGAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGGAGACTGGGAGAGGACAAAGACACTCACCAACCTGGGAAAGAG  300

seq1  AGATGGGCAGACCAACCGCAGCCACGGAAAACCAAAAGCATTAACACTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGCAGACCAACCGCAGCCACGGAAAACCAAAAGCATTAACACTCT  350

seq1  ACATGCATGAACACTTTTAACAAAAACAGACCCATGGCTTTAGAAGCCAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGAACACTTTTAACAAAAACAGACCCATGGCTTTAGAAGCCAC  400

seq1  AGACTATCAATACCCAAGAAGATAAAACTAGCATCATCCTATAGATGCTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCAATACCCAAGAAGATAAAACTAGCATCATCCTATAGATGCTA  450

seq1  AGGAAATTCGATTCGGGACTTTAGACCTTTGGTGAACGAATCCCTTTGCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTCGATTCGGGACTTTAGACCTTTGGTGAACGAATCCCTTTGCT  500

seq1  GGATATGGTGGCACACACCTCTAAGCCCAGCACCCAGGCAGAGGAAGTGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGGTGGCACACACCTCTAAGCCCAGCACCCAGGCAGAGGAAGTGG  550

seq1  TTCTTGTGAATCTGAGGTCAGACTGGTGATCTAAATAGCAAGTTACAGAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGAATCTGAGGTCAGACTGGTGATCTAAATAGCAAGTTACAGAC  600

seq1  CCAGTCAGGACTGCGCAGTGAGATCCTGTCTCAAGAAAGAAAGAAGTGGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAGGACTGCGCAGTGAGATCCTGTCTCAAGAAAGAAAGAAGTGGG  650

seq1  GGGCTGGAGAGATGGCTCAGCGGTTAGGAGCACTGGCTGCTCTTCCAGAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAGAGATGGCTCAGCGGTTAGGAGCACTGGCTGCTCTTCCAGAG  700

seq1  GTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCACAACCATCCGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGTTCAAATCCCAGCAACTACATGGTGGCTCACAACCATCCGTA  750

seq1  ATGGGATCCAGTGCCCTCTTCTGGTGTGTCAGAAGACAGCGACAGTGTAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATCCAGTGCCCTCTTCTGGTGTGTCAGAAGACAGCGACAGTGTAC  800

seq1  TCACATACATTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA  850

seq1  TAAATAAATCTTTAAAGAAAGAAAAAAAGAAAGAAT  879
      ||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATCTTTAAAGAAAGAAAAAAAGAAAGAAT  886