BAC Information

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BAC

Clone NameB6Ng01-184I05
Chromosome11 (Build37)
Map Location 40,305,623 - 40,306,351
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039241
Downstream geneLOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256, LOC100039285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I05.bB6Ng01-184I05.g
ACCGA009869GA009870
length1,223732
definitionB6Ng01-184I05.b B6Ng01-184I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatagatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaagggtgtgtttccctatttctttcctcagcctgtt
attcttgtataagagaagggccattgacttggtttgagtttattttatat
tccagctacttcaccgaagctggtttatcaggtttaggagtctcctgggt
agaatataaggtcactaataatacattcatatcattcgcaagtgatattt
ggacttcctcttcaatggaatcctgcaatctctttggtggcatgctctcg
tgcgcataaccttaccagacgac
gaattcatcatagaagagggagatataaatcggataaccattgtgacatg
aaattaccaattgtaagaaccccaggatcagaacagggggaacaactgac
cagggaaaactagcagagcctgggttttgcagggagagttttttccagga
ggacttgagtggatctgagctgagagagtttgttcatgaagtgagataag
gttgaagagaatttcaagtcagaggaaacggcatttcaaaaagccttaag
gtgtgaaaagggggtggtggtgggaggaactagaagaaagggcaagatga
aggagcattttgagaggagctattagataagagatcaaaaaagccaccaa
catcattcagttaaggatgccaaaggggacctctatctataaaagataag
cctcagcactttgagaagccatagaaggtccatacagaatttaaacattc
aaaatttggcttcaaagatgtcaccccttgtgcccggctgcgcaaaataa
gctggctcagagttgctgcagtcacaggagacttagttgagtgactactt
tgagatgaataggtaagtaccaatttggacttaaagtggttttggctgac
gagttggaaaactattgtaacattttaggcaaagatggaagtggtttgta
ctatgatattggtagtggagatggagcagaaatgaatttgctgtcaatag
ttgtctccttatcttctgggtgctgtggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40305623_40306351
seq2: B6Ng01-184I05.g_69_800 (reverse)

seq1  TCCTCCACAGCACCCAGAAGAT-AGGAGACAACTATTGACAGCAAATTCA  49
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCTCCACAGCACCCAGAAGATAAGGAGACAACTATTGACAGCAAATTCA  50

seq1  -TTCTGCTCCATCTCCACTACCAATATCATAGTACAAACCACTTCCATCT  98
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCCATCTCCACTACCAATATCATAGTACAAACCACTTCCATCT  100

seq1  TTGCCTAAAATGTTACAATAGTTTTCCAACTCGTCAGCCAAAACCACTTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAAAATGTTACAATAGTTTTCCAACTCGTCAGCCAAAACCACTTT  150

seq1  AAGTCCAAATTGGTACTTACCTATTCATCTC-AAGTAGTCACTCAACTAA  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTCCAAATTGGTACTTACCTATTCATCTCAAAGTAGTCACTCAACTAA  200

seq1  GTCTCCTGTGACTGCAGCAACTCTGAGCCAGCTTATTTTGCGCAGCCGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGTGACTGCAGCAACTCTGAGCCAGCTTATTTTGCGCAGCCGGG  250

seq1  CACAAGGGGTGACATCTTTGAAGCCAAATTTTGAATGTTTAAATTCTGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGGGTGACATCTTTGAAGCCAAATTTTGAATGTTTAAATTCTGTA  300

seq1  TGGACCTTCTATGGCTTCTCAAAGTGCTGAGGCTTATCTTTTATAGATAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTTCTATGGCTTCTCAAAGTGCTGAGGCTTATCTTTTATAGATAG  350

seq1  AGGTCCCCTTTGGCATCCTTAACTGAATGATGTTGGTGGCTTTTTTGATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCTTTGGCATCCTTAACTGAATGATGTTGGTGGCTTTTTTGATC  400

seq1  TCTTATCTAATAGCTCCTCTCAAAATGCTCCTTCATCTTGCCCTTTCTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTAATAGCTCCTCTCAAAATGCTCCTTCATCTTGCCCTTTCTTC  450

seq1  TAGTTCCTCCCACCACCACCCCCTTTTCACACCTTAAGGCTTTTTGAAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTCCCACCACCACCCCCTTTTCACACCTTAAGGCTTTTTGAAAT  500

seq1  GCCGTTTCCTCTGACTTGAAATTCTCTTCAACCTTATCTCACTTCATGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTTCCTCTGACTTGAAATTCTCTTCAACCTTATCTCACTTCATGAA  550

seq1  CAAACTCTCTCAGCTCAGATCCACTCAAGTCCTCCTGGAAAAAACTCTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTCTCAGCTCAGATCCACTCAAGTCCTCCTGGAAAAAACTCTCC  600

seq1  CTGCAAAACCCAGGCTCTGCTAGTTTTCCCTGGTCAGTTGTTCCCCCTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAACCCAGGCTCTGCTAGTTTTCCCTGGTCAGTTGTTCCCCCTGT  650

seq1  TCTGATCCTGGGGTTCTTACAATTGGTAATTTCATGTCACAATGGTTATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCTGGGGTTCTTACAATTGGTAATTTCATGTCACAATGGTTATC  700

seq1  CGATTTATATCTCCCTCTTCTATGATGAATTC  729
      ||||||||||||||||||||||||||||||||
seq2  CGATTTATATCTCCCTCTTCTATGATGAATTC  732