BAC Information

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BAC

Clone NameB6Ng01-184O08
Chromosome11 (Build37)
Map Location 27,430,797 - 27,431,866
singlet/doubletsinglet
Overlap geneLOC100042377
Upstream geneVrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
Downstream geneEG626571, Ccdc85a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184O08.bB6Ng01-184O08.g
ACCGA010157GA010158
length1,0741,202
definitionB6Ng01-184O08.b B6Ng01-184O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcatttcttcagggtgtttgttcaacctggaggaacagatcc
agtcaatgctacccagaaaggaaacaggctagccttaggaaaagttatcc
ctctttgaattatatgacctttctatatacacagctcatcctgatagcca
tagccacataacttcatattgaagtttttagggcttctggcaattccata
tccaaccacctgatgctgagttccttattctggagatgtgccttctcatg
tttttgtttttgtttttgactctgaaaagtacctaatagggatgtaaggg
tgctttccacaattttgaatatacttggtcttgttgtcaattggagaagt
aaactttatggatgaaataccatttctggagctataaatcatttaatctg
aaacctttttacttttgtatttacaggagaataaggatgatgtttatttc
agtagaatttctcctacttatcagattgattcattaaaaatgcaagtaca
gagaaatgaagaacaaatactcatctttttaaatggtaaaagtatagtgc
tctccaagacacctcatatttatcaagactttgaacaatatttttaaaag
ttgtctaaagcagtagtttattggattaaataataaactgttagatgtgt
ccagtatatagaattgtttcatcatttgattagggcattttccatgagaa
cagtctccagatttggtgttatgatttcatgttctactctatgcacagtt
acaataacaattgcattagcatctgtagtggtagtgataggaatactatg
gtctgggagtagtttatttgtttcttcctttcttctttttattatactct
accaatttagtccctatcagtggcctgttatgtgtctgtgtatttttctc
ttattgatactccctgttgctcttttcagatatgatgtcttaatcaaccc
tacactattccatcatatattttctacaaatttcaaggcaataacccaaa
attcaaatattttaacaactatttcagaatgaaatgacaaggggattatt
ctcaagtcttctttctaccttttt

gaattcacattggggtacacacatggtctgttgactgaggaagaaaagac
tagggcttggtttactgctggttctatatattatgtaggaatcactcagc
agtagacagatgctgcattataatgcctttctggaacaatcttgaattac
actggcaaaggaaaatttcacagtggacagaatttggggcagtacatatg
gtattttagtttctttggaagaagaaatgttcaggtgtgtgaaagttcac
tgattcatacactgattctctgtatccagtgaattaggttagggacttgg
aaacatcatgattggagaattggtgaggaagaaatctcaggaagaagcat
gtagaaagatctttccaaatgtgcacatgatttgaagatactttccctgg
aaatccacaccaaaaactgtattcagctgaggaggagttgaataatcaag
tagataaggtgctgtatcctatgcttaggagggatgattgattcggatta
ccatgaggaaattggatttcttctccacaataggagtcagaaagattatg
tctagagtgcaagagtcccattagggcatcacttggtgctattgtgttct
gtgttctatgagtgaacccaaatggaaactacaacagcctaatccaggaa
gaatgagaaagcacacagacatttcaagaatgaaggaaaagggccaagac
ctgctgaggtgcttgctgagagtggaggaaatacagaatggatagtagaa
gacagtagttatatataaaatttaaagccacatgaccagttatagaaata
aggataatagttgacatgagctcttctgttgtattttgctaatgtattta
aacaaatatttgtgttttctttaaatttcattatcatatgttgtaagatt
atttaagaaaatgtcaatagttttgtattattatctttaagatactaaaa
agatgtcccctaagggaacattgccatgtattctaaatttataatgcatt
tgccagctgtatacggaatagttatatccaggttaggataagcatgacct
aggttcaaatataaatgccatttacaattatatgtcaaatagcttataat
atgtttacatgtataaggaactgtcttattgacctttgtttggaatatct
gatatacgagaatctgcatggggtgctaagatgtaccagaaggggtgtac
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_27430797_27431866
seq2: B6Ng01-184O08.b_40_1113

seq1  GAATTCTCTCATTTCTTCAGGGTGTTTGTTCAACCTGGAGGAACAGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCATTTCTTCAGGGTGTTTGTTCAACCTGGAGGAACAGATCC  50

seq1  AGTCAATGCTACCCAGAAAGGAAACAGGCTAGCCTTAGGAAAAGTTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGCTACCCAGAAAGGAAACAGGCTAGCCTTAGGAAAAGTTATCC  100

seq1  CTCTTTGAATTATATGACCTTTCTATATACACAGCTCATCCTGATAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAATTATATGACCTTTCTATATACACAGCTCATCCTGATAGCCA  150

seq1  TAGCCACATAACTTCATATTGAAGTTTTTAGGGCTTCTGGCAATTCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACATAACTTCATATTGAAGTTTTTAGGGCTTCTGGCAATTCCATA  200

seq1  TCCAACCACCTGATGCTGAGTTCCTTATTCTGGAGATGTGCCTTCTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCACCTGATGCTGAGTTCCTTATTCTGGAGATGTGCCTTCTCATG  250

seq1  TTTTTGTTTTTGTTTTTGACTCTGAAAAGTACCTAATAGGGATGTAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTGTTTTTGACTCTGAAAAGTACCTAATAGGGATGTAAGGG  300

seq1  TGCTTTCCACAATTTTGAATATACTTGGTCTTGTTGTCAATTGGAGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCACAATTTTGAATATACTTGGTCTTGTTGTCAATTGGAGAAGT  350

seq1  AAACTTTATGGATGAAATACCATTTCTGGAGCTATAAATCATTTAATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTATGGATGAAATACCATTTCTGGAGCTATAAATCATTTAATCTG  400

seq1  AAACCTTTTTACTTTTGTATTTACAGGAGAATAAGGATGATGTTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTTTACTTTTGTATTTACAGGAGAATAAGGATGATGTTTATTTC  450

seq1  AGTAGAATTTCTCCTACTTATCAGATTGATTCATTAAAAATGCAAGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATTTCTCCTACTTATCAGATTGATTCATTAAAAATGCAAGTACA  500

seq1  GAGAAATGAAGAACAAATACTCATCTTTTTAAATGGTAAAAGTATAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGAAGAACAAATACTCATCTTTTTAAATGGTAAAAGTATAGTGC  550

seq1  TCTCCAAGACACCTCATATTTATCAAGACTTTGAACAATATTTTTAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGACACCTCATATTTATCAAGACTTTGAACAATATTTTTAAAAG  600

seq1  TTGTCTAAAGCAGTAGTTTATTGGATTAAATAATAAACTGTTAGATGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAAAGCAGTAGTTTATTGGATTAAATAATAAACTGTTAGATGTGT  650

seq1  CCAGTATATAGAATTGTTTCATCATTTGATTAGGGCATTTTCCATGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATATAGAATTGTTTCATCATTTGATTAGGGCATTTTCCATGAGAA  700

seq1  CAGTCTCCAGATTTGGTGTTATGATTTCATGTTCTACTCTATGCACAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCCAGATTTGGTGTTATGATTTCATGTTCTACTCTATGCACAGTT  750

seq1  ACAATAACAATTGCATTAGCATCTGTAGTGGTAGTGATAGGAATACTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAACAATTGCATTAGCATCTGTAGTGGTAGTGATAGGAATACTATG  800

seq1  GTCTGGGAGTAGTTTATTTGTTTCTTCCTTTCTTCTTTTTATTATACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGAGTAGTTTATTTGTTTCTTCCTTTCTTCTTTTTATTATACTCT  850

seq1  ACCAATTTAGT-CCTATCAGTGGCCTGTTATGTGTCTGTGTATTTTTCTC  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTTAGTCCCTATCAGTGGCCTGTTATGTGTCTGTGTATTTTTCTC  900

seq1  TTATTGATACTCCCTGTTGCTCTTTTCAGATATGATGTCTTAATCAACCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATACTCCCTGTTGCTCTTTTCAGATATGATGTCTTAATCAACCC  950

seq1  TACACTATTCCATCATATATTTTCTACAAATTTCAAGGCAAATAACCAAA  999
      |||||||||||||||||||||||||||||||||||||||||  | |||||
seq2  TACACTATTCCATCATATATTTTCTACAAATTTCAAGGCAATAACCCAAA  1000

seq1  ATTCAAATATTTTAACAACTA-TTCAGAATGAAATGACAA-GGGATTA-T  1046
      ||||||||||||||||||||| |||||||||||||||||| ||||||| |
seq2  ATTCAAATATTTTAACAACTATTTCAGAATGAAATGACAAGGGGATTATT  1050

seq1  CTCAAGTCCTCCTTCTACCTTTTT  1070
      |||||||| || ||||||||||||
seq2  CTCAAGTCTTCTTTCTACCTTTTT  1074


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