BAC Information

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BAC

Clone NameB6Ng01-185D21
Chromosome11 (Build37)
Map Location 26,712,565 - 26,713,211
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300
Downstream geneLOC666270, LOC100042367, LOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185D21.bB6Ng01-185D21.g
ACCGA010407GA010408
length6471,153
definitionB6Ng01-185D21.b B6Ng01-185D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggcaatcaacatgtaattttccattattgttaaccaccagt
aaataaggagcaaagttaatcaactagtcagagtggagaagtggctatat
catgtcctgacctagaaattatattcatatcatatggtatcatattgtgt
catatctatctatattcatgacagatatcttttagatgtcattaaaatat
ttttgtaggtagataagatagaaagataaaaccttgaccacgatgaaacc
ctaatgactaaataggacgggaggcacaaacttggaaatggaaaataaaa
gaaaaattcaattcagtgtggaaattaagttaagacagaaatctctttga
ttgacaccagagaaatgagcatgggttgccttgagaaaccatgtggatga
taatgaaagtagcaatgaaagaaaaaatcagaattgcagataaaaccagc
tattttgctagccaatttttgcattaggaaaaagaaatgattttacagtg
ttcatgtaacaatttctttcaatttcttaatccttttgaaactactcatc
ttctttagaaacagaatagtttttacagtgaattaatactaaaatgggct
gcatttgttgttttgggtttgtttgtttgttggaggttttgttgttg

gaattcaaaatagactggaccagaaaataaattccttctgacacataata
atcagaacaacaaatgcactaaacaaagatagaatattcaaagcagtaag
ggagaaaggtcaagtaacatatataggcagacctattagaattacaccag
agactatgacagtcagaagatcctggacagatgttatatagaccctaaga
gaacacaaatgtcaccttaggctactatacccagcaaaactctcaattac
catagatggagaaaccaaagtattccatgtcaaaaccaaactcacacaat
atctttcaacgaattcagctcttcaaaaaataataaaaggaaaactccaa
caaaatgagggaaatgacaccacaataggcaaaaaagtaatccttcaaca
aacctaaaggaagacagccacaggaacagaatcccaactctaagaacaaa
atttacagaaagcaacaattacttttctttgatttctcttaacatcaata
gactcaattccccaataaaaagacatagactaataaaatgggtacacaaa
caggacccaacattttgctgcttacaggaaacccacatcagggataaaga
cagacactacctcagagtacaaggatggaaaacaattttccaagaaaata
gtccaaagaaacaagatggagtagccattctaatatcgaataaaattgaa
ttccaaccaaaaggtatcaaaaaagacaaggaggggcacttcatacatca
ttctcatcaatggacagatcctggaaacagaaactaaacagagacaaatt
gaaactaacagaagttatgaaacaagtggatttaaaagacatctacagaa
catttttatcctaaaacagaaggatatatattcttctcagcacctcttgg
accttttccaaaattgaccatataattggtcacaaaataggcctcaacag
ggtacaaaaatattgaaattatcccatgcatccctatcacaaatatagga
aatatagacatataggaaacataaatatagaagcaacattcacatgggaa
ctgaacacactctactcatgatactttggtcaaggtaactttaaaagagt
aagaacttttagagtttatgcaaaatggaagcccccaaccataccccctc
aac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26712565_26713211
seq2: B6Ng01-185D21.b_41_687 (reverse)

seq1  CAACAACAAAACCTCCAACAAACAAACAAACCCAAAACAACAAATGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAAACCTCCAACAAACAAACAAACCCAAAACAACAAATGCAGC  50

seq1  CCATTTTAGTATTAATTCACTGTAAAAACTATTCTGTTTCTAAAGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAGTATTAATTCACTGTAAAAACTATTCTGTTTCTAAAGAAGAT  100

seq1  GAGTAGTTTCAAAAGGATTAAGAAATTGAAAGAAATTGTTACATGAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTTTCAAAAGGATTAAGAAATTGAAAGAAATTGTTACATGAACAC  150

seq1  TGTAAAATCATTTCTTTTTCCTAATGCAAAAATTGGCTAGCAAAATAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATCATTTCTTTTTCCTAATGCAAAAATTGGCTAGCAAAATAGCT  200

seq1  GGTTTTATCTGCAATTCTGATTTTTTCTTTCATTGCTACTTTCATTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATCTGCAATTCTGATTTTTTCTTTCATTGCTACTTTCATTATCA  250

seq1  TCCACATGGTTTCTCAAGGCAACCCATGCTCATTTCTCTGGTGTCAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGGTTTCTCAAGGCAACCCATGCTCATTTCTCTGGTGTCAATCA  300

seq1  AAGAGATTTCTGTCTTAACTTAATTTCCACACTGAATTGAATTTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTTCTGTCTTAACTTAATTTCCACACTGAATTGAATTTTTCTTT  350

seq1  TATTTTCCATTTCCAAGTTTGTGCCTCCCGTCCTATTTAGTCATTAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCATTTCCAAGTTTGTGCCTCCCGTCCTATTTAGTCATTAGGGT  400

seq1  TTCATCGTGGTCAAGGTTTTATCTTTCTATCTTATCTACCTACAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCGTGGTCAAGGTTTTATCTTTCTATCTTATCTACCTACAAAAATA  450

seq1  TTTTAATGACATCTAAAAGATATCTGTCATGAATATAGATAGATATGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGACATCTAAAAGATATCTGTCATGAATATAGATAGATATGACA  500

seq1  CAATATGATACCATATGATATGAATATAATTTCTAGGTCAGGACATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGATACCATATGATATGAATATAATTTCTAGGTCAGGACATGATA  550

seq1  TAGCCACTTCTCCACTCTGACTAGTTGATTAACTTTGCTCCTTATTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTCTCCACTCTGACTAGTTGATTAACTTTGCTCCTTATTTACT  600

seq1  GGTGGTTAACAATAATGGAAAATTACATGTTGATTGCCTGAGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTAACAATAATGGAAAATTACATGTTGATTGCCTGAGAATTC  647


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