BAC Information

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BAC

Clone NameB6Ng01-185E13
Chromosome11 (Build37)
Map Location 76,213,212 - 76,315,557
singlet/doubletdoublet
Overlap geneTimm22, Abr
Upstream geneSmyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae, Doc2b, Rph3al, 1700016K19Rik, 1500005K14Rik, Vps53, LOC668634, 2310047D13Rik, Gemin4, Dbil5, Glod4, Rnmtl1, Nxn
Downstream geneLOC100043483, A830053O21Rik, Tusc5, Gosr1, Cpd, Tmigd1, Blmh, Slc6a4, Ccdc55, Efcab5, LOC628108, Ssh2, LOC544800, Coro6, Ankrd13b, 2210008F06Rik, Git1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185E13.bB6Ng01-185E13.g
ACCGA010439GA010440
length939555
definitionB6Ng01-185E13.b B6Ng01-185E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,213,212 - 76,214,149)(76,314,997 - 76,315,557)
sequence
gaattcataaatacttgtgggctgattacaagtcacagtgtgggatttca
gtccacaggtcgctggaaccattccccgatgggaaatggctctcttccat
ttccgtaaatgtatgcaacagatggcgcagcgtttccaaatcagtattgg
ctgctctcctgacttcatagcttatctcaggtctgctagtagttgagaga
gaaaaaaaattttaaccccatcttgaaagatgctttccaatgcctaggaa
agaaccctgattaaacaaatgatctgtggcaagtttcctaggcacgaaca
caggacaaaatgtacactattacacatacacatgcatacacacattttta
aaaaagaggaccattcatgtgtatcagctcagctactaacaacagtgaca
ttttaagaggaaaacccaaccactggctatccttcatggctttcgaggtt
atttctttcgtatctgccgccatctaatggaagaatgaaagagagaactc
taccaacacataagatgcaaaagattaaagtgaaagcagcagaatgcttt
aattacacaggcttcctctactgtaacacacacacacacacaaacacaca
cacacagagagcacaaagtgtatgacacaagaccatttaaatttcagaat
ataacctcatacttctagtagaaatgccccaaagtcctcagtgtgtttaa
ggtagagagaaaaattgtttaagttttcaggcctgtaaaatatcatcaca
tgaaccaatgaaagtgttaaagacaatcttcacacactggtgccacaaat
ggtggctcacgcctttaatcccagcacccaggaagcacatctttgtgagt
ttgagggcaacctggttctacaacagccaggcttacacaatgacaccctg
cttcaaaacactaaataaattgtctaattcgtgtgtgtg
tcttaccccacccctttctctgtgtgtgtgtgtgtgcatgtgtgtgtgtg
tgcatgtgtgtgtgcatgtgtgtgtgtctgtgtgcatgtgcacgcatgct
tacactttcataaatttatgtacactgcatgtgtgcaggagcccacagag
gccaaaaaggtgtggatctcttagaactggggttacaaacagttgagtgc
caccatgtgggtgctaggaactgaacccaggtcctctggaagagcagtga
gcattcttaaccattaaaccatttttcctggcactgactttgttagttta
ttattatttttttttttaccatataaagagtattggcttctacccaatag
ctttatgctattgagttctgtctgagttttgttttacattgtttgaaaca
gtgtcactctagcccaggctagccttgaacccttagcacttctcttgtct
ccctagtacttgacaggcatgagccgccatgtcagactcctgcgatcttt
tgagtgattgcttgccgcgatggaaagggaaggtggagggggaatgaggg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_76213212_76214149
seq2: B6Ng01-185E13.b_46_984

seq1  GAATTCATAAATACTTGTGGGCTGATTACAAGTCACAGTGTGGGATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATACTTGTGGGCTGATTACAAGTCACAGTGTGGGATTTCA  50

seq1  GTCCACAGGTCGCTGGAACCATTCCCCGATGGGAAATGGCTCTCTTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGGTCGCTGGAACCATTCCCCGATGGGAAATGGCTCTCTTCCAT  100

seq1  TTCCGTAAATGTATGCAACAGATGGCGCAGCGTTTCCAAATCAGTATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAAATGTATGCAACAGATGGCGCAGCGTTTCCAAATCAGTATTGG  150

seq1  CTGCTCTCCTGACTTCATAGCTTATCTCAGGTCTGCTAGTAGTTGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCCTGACTTCATAGCTTATCTCAGGTCTGCTAGTAGTTGAGAGA  200

seq1  GAAAAAAAATTTTAACCCCATCTTGAAAGATGCTTTCCAATGCCTAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATTTTAACCCCATCTTGAAAGATGCTTTCCAATGCCTAGGAA  250

seq1  AGAACCCTGATTAAACAAATGATCTGTGGCAAGTTTCCTAGGCACGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCTGATTAAACAAATGATCTGTGGCAAGTTTCCTAGGCACGAACA  300

seq1  CAGGACAAAATGTACACTATTACACATACACATGCATACACACATTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAAATGTACACTATTACACATACACATGCATACACACATTTTTA  350

seq1  AAAAAGAGGACCATTCATGTGTATCAGCTCAGCTACTAACAACAGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGGACCATTCATGTGTATCAGCTCAGCTACTAACAACAGTGACA  400

seq1  TTTTAAGAGGAAAACCCAACCACTGGCTATCCTTCATGGCTTTCGAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGGAAAACCCAACCACTGGCTATCCTTCATGGCTTTCGAGGTT  450

seq1  ATTTCTTTCGTATCTGCCGCCATCTAATGGAAGAATGAAAGAGAGAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCGTATCTGCCGCCATCTAATGGAAGAATGAAAGAGAGAACTC  500

seq1  TACCAACACATAAGATGCAAAAGATTAAAGTGAAAGCAGCAGAATGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACACATAAGATGCAAAAGATTAAAGTGAAAGCAGCAGAATGCTTT  550

seq1  AATTACACAGGCTTCCTCTACTGTAACACACACACACACACAAACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACAGGCTTCCTCTACTGTAACACACACACACACACAAACACACA  600

seq1  CACACAGAGAGCACAAAGTGTATGACACAAGACCATTTAAATTTCAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGAGCACAAAGTGTATGACACAAGACCATTTAAATTTCAGAAT  650

seq1  ATAACCTCATACTTCTAGTAGAAATGCCCCAAAGTCCTCAGTGTGTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTCATACTTCTAGTAGAAATGCCCCAAAGTCCTCAGTGTGTTTAA  700

seq1  GGTAGAGAGAAAAATTGTTTAAGTTTTCAGGCCTGTAAAATATCATCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGAGAAAAATTGTTTAAGTTTTCAGGCCTGTAAAATATCATCACA  750

seq1  TGAACCAATGAAAGTGTTAAAGACAATCTTCACACACTGGTGCCACAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAATGAAAGTGTTAAAGACAATCTTCACACACTGGTGCCACAAAT  800

seq1  GGTGGCTCACGCCTTTAATCCCAGCACCCAGGAAGCACATCTTTGTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACGCCTTTAATCCCAGCACCCAGGAAGCACATCTTTGTGAGT  850

seq1  TTGAGGGCAACCTGG-TCTACAACAGCCAGGCTTACACAATGACACCCTG  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGAGGGCAACCTGGTTCTACAACAGCCAGGCTTACACAATGACACCCTG  900

seq1  CTTCAAAACACTAAATAAATTGTCTTATTCGTGTGTGTG  938
      ||||||||||||||||||||||||| |||||||||||||
seq2  CTTCAAAACACTAAATAAATTGTCTAATTCGTGTGTGTG  939

seq1: chr11_76314997_76315557
seq2: B6Ng01-185E13.g_67_627 (reverse)

seq1  ACACACCCTCATTCCCCCTCCACCTTCCCTTTCCATCGCGGCAAGCAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCTCATTCCCCCTCCACCTTCCCTTTCCATCGCGGCAAGCAATC  50

seq1  ACTCAAAAGATCGCAGGAGTCTGACATGGCGGCTCATGCCTGTCAAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAAGATCGCAGGAGTCTGACATGGCGGCTCATGCCTGTCAAGTAC  100

seq1  TAGGGAGACAAGAGAAGTGCTAAGGGTTCAAGGCTAGCCTGGGCTAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGACAAGAGAAGTGCTAAGGGTTCAAGGCTAGCCTGGGCTAGAGT  150

seq1  GACACTGTTTCAAACAATGTAAAACAAAACTCAGACAGAACTCAATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGTTTCAAACAATGTAAAACAAAACTCAGACAGAACTCAATAGCA  200

seq1  TAAAGCTATTGGGTAGAAGCCAATACTCTTTATATGGTAAAAAAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTATTGGGTAGAAGCCAATACTCTTTATATGGTAAAAAAAAAAAT  250

seq1  AATAATAAACTAACAAAGTCAGTGCCAGGAAAAATGGTTTAATGGTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAACTAACAAAGTCAGTGCCAGGAAAAATGGTTTAATGGTTAAG  300

seq1  AATGCTCACTGCTCTTCCAGAGGACCTGGGTTCAGTTCCTAGCACCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCACTGCTCTTCCAGAGGACCTGGGTTCAGTTCCTAGCACCCACA  350

seq1  TGGTGGCACTCAACTGTTTGTAACCCCAGTTCTAAGAGATCCACACCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCACTCAACTGTTTGTAACCCCAGTTCTAAGAGATCCACACCTTT  400

seq1  TTGGCCTCTGTGGGCTCCTGCACACATGCAGTGTACATAAATTTATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTCTGTGGGCTCCTGCACACATGCAGTGTACATAAATTTATGAAA  450

seq1  GTGTAAGCATGCGTGCACATGCACACAGACACACACACATGCACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGCATGCGTGCACATGCACACAGACACACACACATGCACACACAC  500

seq1  ATGCACACACACACACATGCACACACACACACACAGAGAAAGGGGTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACACACACACACATGCACACACACACACACAGAGAAAGGGGTGGGG  550

seq1  TAAGAGAATTC  561
      |||||||||||
seq2  TAAGAGAATTC  561