BAC Information

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BAC

Clone NameB6Ng01-186E19
Chromosome11 (Build37)
Map Location 6,395,041 - 6,541,070
singlet/doubletdoublet
Overlap geneMyo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap
Upstream geneLOC382478, Xbp1, Ccdc117, LOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2, Polm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb
Downstream geneLOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186E19.bB6Ng01-186E19.g
ACCGA011180GA011181
length759226
definitionB6Ng01-186E19.b B6Ng01-186E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,540,312 - 6,541,070)(6,395,041 - 6,395,266)
sequence
gaattctttcactgctaaaacagggcgggaggagtccagagccctgccac
tgggtgcagaacatgaagaccccttgagtggaaaggggttatacagctgg
acagtggtggcgcacacctttaatcccagcactcgggaggcagaggcaga
cggatctctgagttcgaggccagcctggtctacagaatgagttccgggac
agccagggctacacagagaaactcttgtctcgaaaaaccaaaaaaaaaca
aaaaaggaaaggggttacacaacagagactcaggtcacagctacccatca
cacacaggatacacatccaaaggtgttcacaggcagatgaggaacgagga
gaaggggctcaagcaagggcctaaagtttcttttttttttttttttcttt
ttttttttccctgtggcctagagtttcaagaggctgaggacctaggcatg
aaccaagaggggccaaaccacttcaagaagcagggggtagcagcagaatc
tcactatcagccttgagcacagctgggaaggagatccatggaaacaacca
agaaagagctgaaaggggctggagagatggctcagcagttaagagcactg
agtgctcttccgaaggtcctgagttcaaatcccagcaaccatatggtggg
tcacaaccatctgtaatgagatctgatgccctcttctggtgtgtctgaag
acagctacagtgtacttatgtataataaataaataaatctttagaaaggg
agggaggga
ataaaactataaagaactgggcatggtggcgcatgcctttaatcccagcg
ggcggatttctgtgttcgaggccagcctggtctacaaagtgagttctagg
acagcctgggctatacagagaaaccctgtcttgaaaaaaccaaaaccaaa
ccagaagaacaaaacaaaaaactataaagagagaaggaatatgtttgtgg
aggtgtagtcaggtatgtgggaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6540312_6541070
seq2: B6Ng01-186E19.b_45_803 (reverse)

seq1  TCCCTCCCTCCCTTTCTAAAGATTTATTTATTTATTATACATAAGTACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTTTCTAAAGATTTATTTATTTATTATACATAAGTACAC  50

seq1  TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACAGA  100

seq1  TGGTTGTGACCCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGACCCACCATATGGTTGCTGGGATTTGAACTCAGGACCTTCGG  150

seq1  AAGAGCACTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCCTTTCA  200

seq1  GCTCTTTCTTGGTTGTTTCCATGGATCTCCTTCCCAGCTGTGCTCAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCTTGGTTGTTTCCATGGATCTCCTTCCCAGCTGTGCTCAAGGC  250

seq1  TGATAGTGAGATTCTGCTGCTACCCCCTGCTTCTTGAAGTGGTTTGGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTGAGATTCTGCTGCTACCCCCTGCTTCTTGAAGTGGTTTGGCCC  300

seq1  CTCTTGGTTCATGCCTAGGTCCTCAGCCTCTTGAAACTCTAGGCCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGTTCATGCCTAGGTCCTCAGCCTCTTGAAACTCTAGGCCACAGG  350

seq1  GAAAAAAAAAAAGAAAAAAAAAAAAAAAAGAAACTTTAGGCCCTTGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAAAGAAAAAAAAAAAAAAAAGAAACTTTAGGCCCTTGCTTG  400

seq1  AGCCCCTTCTCCTCGTTCCTCATCTGCCTGTGAACACCTTTGGATGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTTCTCCTCGTTCCTCATCTGCCTGTGAACACCTTTGGATGTGTA  450

seq1  TCCTGTGTGTGATGGGTAGCTGTGACCTGAGTCTCTGTTGTGTAACCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGTGATGGGTAGCTGTGACCTGAGTCTCTGTTGTGTAACCCCT  500

seq1  TTCCTTTTTTGTTTTTTTTTGGTTTTTCGAGACAAGAGTTTCTCTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTGTTTTTTTTTGGTTTTTCGAGACAAGAGTTTCTCTGTGTA  550

seq1  GCCCTGGCTGTCCCGGAACTCATTCTGTAGACCAGGCTGGCCTCGAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGTCCCGGAACTCATTCTGTAGACCAGGCTGGCCTCGAACTC  600

seq1  AGAGATCCGTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCGTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGC  650

seq1  CACCACTGTCCAGCTGTATAACCCCTTTCCACTCAAGGGGTCTTCATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGTCCAGCTGTATAACCCCTTTCCACTCAAGGGGTCTTCATGTT  700

seq1  CTGCACCCAGTGGCAGGGCTCTGGACTCCTCCCGCCCTGTTTTAGCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCCAGTGGCAGGGCTCTGGACTCCTCCCGCCCTGTTTTAGCAGTG  750

seq1  AAAGAATTC  759
      |||||||||
seq2  AAAGAATTC  759

seq1: chr11_6395041_6395266
seq2: B6Ng01-186E19.g_69_294

seq1  ATAAAACTATAAAGAACTGGGCATGGTGGCGCATGCCTTTAATCCCAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTATAAAGAACTGGGCATGGTGGCGCATGCCTTTAATCCCAGCG  50

seq1  GGCGGATTTCTGTGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGATTTCTGTGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCTAGG  100

seq1  ACAGCCTGGGCTATACAGAGAAACCCTGTCTTGAAAAAACCAAAACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGGGCTATACAGAGAAACCCTGTCTTGAAAAAACCAAAACCAAA  150

seq1  CCAGAAGAACAAAACAAAAAACTATAAAGAGAGAAGGAATATGTTTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAACAAAACAAAAAACTATAAAGAGAGAAGGAATATGTTTGTGG  200

seq1  AGGTGTAGTCAGGTATGTGGGAAGGG  226
      ||||||||||||||||||||||||||
seq2  AGGTGTAGTCAGGTATGTGGGAAGGG  226