BAC Information

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BAC

Clone NameB6Ng01-186I09
Chromosome11 (Build37)
Map Location 14,135,249 - 14,321,974
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535
Downstream gene1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186I09.bB6Ng01-186I09.g
ACCGA011342GA011343
length1,1151,003
definitionB6Ng01-186I09.b B6Ng01-186I09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,320,855 - 14,321,974)(14,135,249 - 14,136,239)
sequence
gaattctcccaggggatcaattacacccaaaatgttgggtatgtcagagt
tctggtagtattttatgaagatatttttatggaaaaagctacacagataa
tattcagtcctcaaatgatatcttacatgaagtgaaacagcaaatatatt
caaggcaagaataacatctgtaaggctggcttttagtcttacatgtctta
cgttctacttggactctgaaggttcaatgtgagcttgtgcttctgtgttt
ggtattcaggggagaccttaattaggaggctccatcccagagaaggacca
ttccatatgattagctttactcatcattgtgtaaatataatcctgcccta
aagaatgagccattataccagaaaataattaggcaatctaagtaacaaat
ggggtgctgccttcccagtggcaatggtgatcaagactaaaaaacaccag
aaaaactaagagctagaaagcaagacccagtaagagagaaaggtacatat
cttccaaatgacattaaattaaagaggtaatgatctttatagatgtgtaa
atcaatatgagtaaaataataattttgaaggtagcatttcttctgggttg
agatgaagcaacactaggaacagctcccttataattgagatggggaaaaa
ttgctaaaaggatttgctgtaaaggtcaatattcaattaatgtaattgct
gagatactgacatggggcctgatttatgacaatttgtagaactaaaatgt
cctattatttaggaaccaaagtaatttttgagtttatgtcataagctatc
caaactgatgaggatcagatgggtctttgttcccctgaaaggccaaccgt
atatccacaatagataatggatagctctcaatttgtgggaacactcccag
ttaagcgaactctaggctttaaatggagtaagaagagactcatatatgtg
tagtggacaagtgacttctctctggtggctggtctgaattgagaactgga
agaacaacccattcaaaacgaaagggatggatgagtcaatagtgagtatt
aggccctctaacttgacaaaagtgcacttgagaactttgaacttctttta
aaactacttagtatg

gaattcttggtacctagttggtagaactgtttggaaagtttggaaaaact
gcttggctttgttggagaacatgtaccaatgggggtggattttgaggtat
ccacaacccacgcccccctgcctcatgcttgtggatcaggaggtgaggga
tcagttactgctccactgacatgcctgaatccattcctctacaaaacaag
aaatcttagtgccatgagcactggcttgattagtctagttttcaaaatga
agaaaaataaaacattttggatcaattgctctggacataaagcccacgaa
aagtatatcaatcccatgtccaaattcttacacatgcactgattccaaat
actagttttacattatcatgctattgtcatatttattttactgttctcta
gtcaactctaaataactatccactcatatccagcaatttttaatatgtta
gtacatcttgaaattcttttttttttttgtatctttgtttgttttttttt
tttttttttttttttttttttgagacagggtttcactgtatagccctggc
tgtcctggagctcactttgtagaccaggctggccttgaactcagaaatct
gcctgcctttgcctcccaagagctgggattaaaggcatgtgccaccacca
cccagcacatcttgaaattcttagagtggttgtctgatactctgtcttat
ctccttcaaacttgctttaacatgatagcccaagtgatctttgaaacaag
taagtcccagtgtaagggtattgtctctcctttgtccaaaatgcaaaagc
catgcagatgccctacccagtcacagcatgatctgaaatcccaattatct
ggactttggtgggtgatcagcagtttgatatgtttagcatttctttatta
ttatcctgtatttgtgtttcctttgctatttcctcaggtccacctggcag
caaaatggcttagacagattgtttgttgcattatggattccatatcttgc
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14320855_14321974
seq2: B6Ng01-186I09.b_41_1155 (reverse)

seq1  CATACATAAGTAGTTTTAAAAAGAGTTCAAAAGTCTCAAAGTGGCACTTT  50
      ||||| |||||||||||||||  ||||||||  |||| |||| |||| ||
seq2  CATAC-TAAGTAGTTTTAAAAGAAGTTCAAAGTTCTC-AAGT-GCAC-TT  46

seq1  TTGTCAAGTTAGAGGG-CTAATACCTCACTATTGACTCATCCATCCCCTT  99
      |||||||||||||||| |||||| ||||||||||||||||||||||| ||
seq2  TTGTCAAGTTAGAGGGCCTAATA-CTCACTATTGACTCATCCATCCCTTT  95

seq1  CGTTTTGAATGGGTTGTTCCTTCCAGTTCTCAATTCAGACCAGCCACCAG  149
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGTTTTGAATGGGTTGTT-CTTCCAGTTCTCAATTCAGACCAGCCACCAG  144

seq1  AGAGAAGTCACTTGTCCACTACACATATATGAGTCTCTTCTTACTCCATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTCACTTGTCCACTACACATATATGAGTCTCTTCTTACTCCATT  194

seq1  TAAAGCCTAGAGTTCGCTTAACTGGGAGTGTTCCCACAAATTGAGAGCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTAGAGTTCGCTTAACTGGGAGTGTTCCCACAAATTGAGAGCTA  244

seq1  TCCATTATCTATTGTGGATATACGGTTGGCCTTTCAGGGGAACAAAGACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATCTATTGTGGATATACGGTTGGCCTTTCAGGGGAACAAAGACC  294

seq1  CATCTGATCCTCATCAGTTTGGATAGCTTATGACATAAACTCAAAAATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATCCTCATCAGTTTGGATAGCTTATGACATAAACTCAAAAATTA  344

seq1  CTTTGGTTCCTAAATAATAGGACATTTTAGTTCTACAAATTGTCATAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTCCTAAATAATAGGACATTTTAGTTCTACAAATTGTCATAAAT  394

seq1  CAGGCCCCATGTCAGTATCTCAGCAATTACATTAATTGAATATTGACCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCCATGTCAGTATCTCAGCAATTACATTAATTGAATATTGACCTT  444

seq1  TACAGCAAATCCTTTTAGCAATTTTTCCCCATCTCAATTATAAGGGAGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAATCCTTTTAGCAATTTTTCCCCATCTCAATTATAAGGGAGCT  494

seq1  GTTCCTAGTGTTGCTTCATCTCAACCCAGAAGAAATGCTACCTTCAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTAGTGTTGCTTCATCTCAACCCAGAAGAAATGCTACCTTCAAAAT  544

seq1  TATTATTTTACTCATATTGATTTACACATCTATAAAGATCATTACCTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTACTCATATTGATTTACACATCTATAAAGATCATTACCTCTT  594

seq1  TAATTTAATGTCATTTGGAAGATATGTACCTTTCTCTCTTACTGGGTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATGTCATTTGGAAGATATGTACCTTTCTCTCTTACTGGGTCTT  644

seq1  GCTTTCTAGCTCTTAGTTTTTCTGGTGTTTTTTAGTCTTGATCACCATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTAGCTCTTAGTTTTTCTGGTGTTTTTTAGTCTTGATCACCATTG  694

seq1  CCACTGGGAAGGCAGCACCCCATTTGTTACTTAGATTGCCTAATTATTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGAAGGCAGCACCCCATTTGTTACTTAGATTGCCTAATTATTTT  744

seq1  CTGGTATAATGGCTCATTCTTTAGGGCAGGATTATATTTACACAATGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAATGGCTCATTCTTTAGGGCAGGATTATATTTACACAATGATG  794

seq1  AGTAAAGCTAATCATATGGAATGGTCCTTCTCTGGGATGGAGCCTCCTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCTAATCATATGGAATGGTCCTTCTCTGGGATGGAGCCTCCTAA  844

seq1  TTAAGGTCTCCCCTGAATACCAAACACAGAAGCACAAGCTCACATTGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTCTCCCCTGAATACCAAACACAGAAGCACAAGCTCACATTGAAC  894

seq1  CTTCAGAGTCCAAGTAGAACGTAAGACATGTAAGACTAAAAGCCAGCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTCCAAGTAGAACGTAAGACATGTAAGACTAAAAGCCAGCCTT  944

seq1  ACAGATGTTATTCTTGCCTTGAATATATTTGCTGTTTCACTTCATGTAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTTATTCTTGCCTTGAATATATTTGCTGTTTCACTTCATGTAAG  994

seq1  ATATCATTTGAGGACTGAATATTATCTGTGTAGCTTTTTCCATAAAAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTTGAGGACTGAATATTATCTGTGTAGCTTTTTCCATAAAAATA  1044

seq1  TCTTCATAAAATACTACCAGAACTCTGACATACCCAACATTTTGGGTGTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAAAATACTACCAGAACTCTGACATACCCAACATTTTGGGTGTA  1094

seq1  ATTGATCCCCTGGGAGAATTC  1120
      |||||||||||||||||||||
seq2  ATTGATCCCCTGGGAGAATTC  1115


seq1: chr11_14135249_14136239
seq2: B6Ng01-186I09.g_63_1065

seq1  GAATTCTTGGTACCTAGTTGGTAGAACTGTTTGGAAAGTTTGGAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTACCTAGTTGGTAGAACTGTTTGGAAAGTTTGGAAAAACT  50

seq1  GCTTGGCTTTGTTGGAGAACATGTACCAATGGGGGTGGATTTTGAGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCTTTGTTGGAGAACATGTACCAATGGGGGTGGATTTTGAGGTAT  100

seq1  CCACAACCCACGCCCCCCTGCCTCATGCTTGTGGATCAGGAGGTGAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACCCACGCCCCCCTGCCTCATGCTTGTGGATCAGGAGGTGAGGGA  150

seq1  TCAGTTACTGCTCCACTGACATGCCTGAATCCATTCCTCTACAAAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTACTGCTCCACTGACATGCCTGAATCCATTCCTCTACAAAACAAG  200

seq1  AAATCTTAGTGCCATGAGCACTGGCTTGATTAGTCTAGTTTTCAAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAGTGCCATGAGCACTGGCTTGATTAGTCTAGTTTTCAAAATGA  250

seq1  AGAAAAATAAAACATTTTGGATCAATTGCTCTGGACATAAAGCCCACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAAAACATTTTGGATCAATTGCTCTGGACATAAAGCCCACGAA  300

seq1  AAGTATATCAATCCCATGTCCAAATTCTTACACATGCACTGATTCCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATCAATCCCATGTCCAAATTCTTACACATGCACTGATTCCAAAT  350

seq1  ACTAGTTTTACATTATCATGCTATTGTCATATTTATTTTACTGTTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTACATTATCATGCTATTGTCATATTTATTTTACTGTTCTCTA  400

seq1  GTCAACTCTAAATAACTATCCACTCATATCCAGCAATTTTTAATATGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTCTAAATAACTATCCACTCATATCCAGCAATTTTTAATATGTTA  450

seq1  GTACATCTTGAAATTCTTTTTTTTTTTTGTATCTTTGTTTGTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTTGAAATTCTTTTTTTTTTTTGTATCTTTGTTTGTTTTTTTTT  500

seq1  TTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCACTGTATAGCCCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCACTGTATAGCCCTGGC  550

seq1  TGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCT  600

seq1  GCCTGCCTTTGCCTCCCAAGAGCTGGGATTAAAGGCATGTGCCACCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTTTGCCTCCCAAGAGCTGGGATTAAAGGCATGTGCCACCACCA  650

seq1  CCCAGCACATCTTGAAATTCTTAGAGTGGTTGTCTGATACTCTGTCTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACATCTTGAAATTCTTAGAGTGGTTGTCTGATACTCTGTCTTAT  700

seq1  CTCCTTCAAACTTGCTTTAACATGATAGCCAAAGTGATCTTTGAAACAAG  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCCTTCAAACTTGCTTTAACATGATAGCCCAAGTGATCTTTGAAACAAG  750

seq1  TAAGT-CCAGTGTAA-GGTATTGTCTC-CCTTTGTCCAAAATGCAAAAGC  797
      ||||| ||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TAAGTCCCAGTGTAAGGGTATTGTCTCTCCTTTGTCCAAAATGCAAAAGC  800

seq1  CATGCAGATG-CCTA-CCAGTCACAGCATGATCTGAAATCCCAATTATCT  845
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  CATGCAGATGCCCTACCCAGTCACAGCATGATCTGAAATCCCAATTATCT  850

seq1  -GACTTT-GTTGGTGATCAGCAG-TTGATATGTTTAGCATTCTTTTATTA  892
       |||||| || |||||||||||| |||||||||||||||||  |||||||
seq2  GGACTTTGGTGGGTGATCAGCAGTTTGATATGTTTAGCATTTCTTTATTA  900

seq1  TTATCCTGTATTTGTGTTTTTCTTTGCTATTT-CTCATGGTTCCACTTGG  941
      |||||||||||||||| ||| ||||||||||| ||||  | ||||| |||
seq2  TTATCCTGTATTTGTG-TTTCCTTTGCTATTTCCTCA--GGTCCACCTGG  947

seq1  CAGCAGAGTG--CTAGACAGAT--GTTGTTGCATTATGAATT-CATATC-  985
      ||||| | ||   |||||||||   ||||||||||||| ||| |||||| 
seq2  CAGCAAAATGGCTTAGACAGATTGTTTGTTGCATTATGGATTCCATATCT  997

seq1  TGCTTC  991
      ||||||
seq2  TGCTTC  1003


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