BAC Information

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BAC

Clone NameB6Ng01-188E01
Chromosome11 (Build37)
Map Location 25,598,731 - 25,599,847
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042282
Downstream geneLOC100042328, LOC100042345, Fancl, Vrk2, EG628586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188E01.b
ACCGA012599
length1,119
definitionB6Ng01-188E01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctataatgcgattttttttaaaaagcccaggtccactaatat
aatacaacgtatgtttcacccattttttgatgagaaaaaaacataacttt
ctaaaatgcgtttttcagatgctgaatcctacctagtaaagacagaatgt
taaggtctaagggatagttagcaattaccactagatagcgcacaatagct
tcctctcccaaatccaatacattccccacttcaaactctttggagaacaa
aagcatcacacggatattcgcttttcatataaaatgattttcagataata
taatgacacacataccaaggtattaatttaggcctgaaacctccacattc
taaaagaagatattgtatttcacatggctaagtgcagattgtgagccatt
atcactgttaacaagcacattctgatgaagtactgtggatctttattcca
aaggagagttgccaccacattgcatgacccacacggagaggtcaacaatt
aagaacagtgagagtcgcaggattggttggttgaaagatgagtctgatga
ggcaattctcactctcctttctcccaaagagtaatttcaagtaggtgttt
cagcccataaggctgccactccctccagcaactaacccaaaatttaatag
ctcttgctctaccccacgccacaaaactcctgaatttatcaaaactgaag
accggtaaagatcattgtctaaatggttaaaaaaaaaaaaaaaggtatat
ccattccagaacatctagaattactttcatcgttccggtcattgaaattt
ttttttttttttttggaaactgcatatattcttaccaatacttaaatggc
aatcatttaaagatgaactgggtattttatcaccgcagggaaaaatccaa
ccctttcagtaaaagacacaaagtccttgtatatcaacgtccatgtctat
ctcacgacaggtgatacctgccttaaatcttattgtcattctgacctcac
gtaccttcatactaaatcataaacaaaggactgaatgtgtctttcgtttg
atcatcagctggttacgcaagcactctgcatgccatgcctgtgtatatca
aacgtgaagcagatgaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25598731_25599847
seq2: B6Ng01-188E01.b_41_1159

seq1  GAATTCACTCTAAAATGCGATTTTTTTTAAAAAGCCCAGGTCCACTAATA  50
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTC-CTCTATAATGCGATTTTTTTTAAAAAGCCCAGGTCCACTAATA  49

seq1  TAATACAACATATGTTTCAAATATTTTTTGATGAGAAAAAAATATAACTT  100
      ||||||||| |||||||||   |||||||||||||||||||| |||||||
seq2  TAATACAACGTATGTTTCACCCATTTTTTGATGAGAAAAAAACATAACTT  99

seq1  TCTAAAATGCGTTTTTCAAATGCTGAATCCTAGCAAGTAAAGACAGCATT  150
      |||||||||||||||||| ||||||||||||| | ||||||||||| || 
seq2  TCTAAAATGCGTTTTTCAGATGCTGAATCCTACCTAGTAAAGACAGAATG  149

seq1  TTAAAGTCTAAAGGATAGTTAGCAATTAGCAGTAGATAGCACACAATAAC  200
      |||| |||||| |||||||||||||||| || |||||||| ||||||| |
seq2  TTAAGGTCTAAGGGATAGTTAGCAATTACCACTAGATAGCGCACAATAGC  199

seq1  TTCCTCTCCCAAATCCAATACATTCAGTACTTCAAACTCTTTGGAGAACA  250
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  TTCCTCTCCCAAATCCAATACATTCCCCACTTCAAACTCTTTGGAGAACA  249

seq1  AAAGCATCACACGGATATTCGCTTTTCATATAAAATGATTTTCAGATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCACACGGATATTCGCTTTTCATATAAAATGATTTTCAGATAAT  299

seq1  ATAATGACACACATACCAAGGTATTAATTTAGGCCTGAAACCTCCACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACACACATACCAAGGTATTAATTTAGGCCTGAAACCTCCACATT  349

seq1  CTAAAAGAAGATATTGTATTTCACATGGCTAAGTGCAGATTGTGAGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGAAGATATTGTATTTCACATGGCTAAGTGCAGATTGTGAGCCAT  399

seq1  TATCACTGTTAACAAGCACATTCTGATGAAGTACTGTGGATCTTTATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTGTTAACAAGCACATTCTGATGAAGTACTGTGGATCTTTATTCC  449

seq1  AAAGGAGAGTTGCCACCACATTGCATGACCCACACGGAGAGGTCAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGAGTTGCCACCACATTGCATGACCCACACGGAGAGGTCAACAAT  499

seq1  TAAGAACAGTGAGAGTCGCAGGATTGGTTGGTTGAAAGATGAGTCTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAGTGAGAGTCGCAGGATTGGTTGGTTGAAAGATGAGTCTGATG  549

seq1  AGGCAATTCTCACTCTCCTTTCTCCCAAAGAGTAATTTCAAGTAGGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATTCTCACTCTCCTTTCTCCCAAAGAGTAATTTCAAGTAGGTGTT  599

seq1  TCAGCCAAGAAGGCTGCCACTCCCTCCAGCAACTAAGTAAAAATTTAATA  650
      |||||| | |||||||||||||||||||||||||||   |||||||||||
seq2  TCAGCCCATAAGGCTGCCACTCCCTCCAGCAACTAACCCAAAATTTAATA  649

seq1  GCTCTTGCTCTACCCCACCCCACAAAACTCCTGAATTTATCAAAAGTAGA  700
      |||||||||||||||||| |||||||||||||||||||||||||| |  |
seq2  GCTCTTGCTCTACCCCACGCCACAAAACTCCTGAATTTATCAAAACTGAA  699

seq1  GACAGGTAAAGATTATTGTTTAAATGGTTAAAAAAAAAAAAAAAGCTATA  750
      ||| ||||||||| ||||| ||||||||||||||||||||||||| ||||
seq2  GACCGGTAAAGATCATTGTCTAAATGGTTAAAAAAAAAAAAAAAGGTATA  749

seq1  TCCATTCCAGAACATCAAGAATTACTTTCAATGTTCCGGTCATTGAAA-T  799
      |||||||||||||||| |||||||||||||  |||||||||||||||| |
seq2  TCCATTCCAGAACATCTAGAATTACTTTCATCGTTCCGGTCATTGAAATT  799

seq1  TTTTTTTTTTTTTTTGTAAACTGCATTAATAACTACAAATACTTAAATGG  849
      |||||||||||||||| |||||||||  ||   ||| |||||||||||||
seq2  TTTTTTTTTTTTTTTGGAAACTGCATATATTCTTACCAATACTTAAATGG  849

seq1  -AATCATTTAAATAGGAACTGGTTATTTTATCACAACAAGGGAAAAATCC  898
       ||||||||||| | ||||||| |||||||||||  | ||||||||||||
seq2  CAATCATTTAAAGATGAACTGGGTATTTTATCACCGC-AGGGAAAAATCC  898

seq1  AACCCTTTCAGTTAACAGACACAAAGTCATTGTATATCAACAGCAATGTC  948
      ||||||||||| ||| |||||||||||| ||||||||||||  | |||||
seq2  AACCCTTTCAG-TAAAAGACACAAAGTCCTTGTATATCAACGTCCATGTC  947

seq1  TATCTCAGGACAGGTGATTACTTGCCTTAGATCTTATTGTCATTCTGTCC  998
      ||||||| ||||||||| ||| ||||||| ||||||||||||||||| ||
seq2  TATCTCACGACAGGTGA-TACCTGCCTTAAATCTTATTGTCATTCTGACC  996

seq1  TCACATACTTTCAATACTAAAACATAAACAAAGGGCAG-ATGTGTC-TTC  1046
      |||| ||| ||| |||||||| |||||||||||| | | ||||||| |||
seq2  TCACGTACCTTC-ATACTAAATCATAAACAAAGGACTGAATGTGTCTTTC  1045

seq1  GTTTGAATCGCAGCT-GTTACACATAGCACTCTGC-TGCCATG-CTGTGT  1093
      ||||||    ||||| ||||| || |||||||||| ||||||| ||||||
seq2  GTTTGATCATCAGCTGGTTACGCA-AGCACTCTGCATGCCATGCCTGTGT  1094

seq1  AT-TCAAACGTAAAGCAGATGAGGG  1117
      || |||||||| |||||||||||||
seq2  ATATCAAACGTGAAGCAGATGAGGG  1119