MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-189C01
Chromosome	11 (Build37)
Map Location	113,347,619 - 113,487,802
singlet/doublet	doublet
Overlap gene	Slc39a11, Sstr2
Upstream gene	EG667038, LOC100041610, LOC671963, LOC667047, BC006965, Sox9, 2610035D17Rik
Downstream gene	Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2, LOC100041739, LOC634710, 4932435O22Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG667038 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667038 MGI:3645286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041610 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC671963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667047 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	BC006965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217294 MGI:2384955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Sox9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20682 MGI:98371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610035D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs

name	Slc39a11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69806 MGI:1917056
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sstr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20606 MGI:98328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16834 MGI:1333873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu99e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28081 MGI:106351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Wsu47e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:276852 MGI:106356
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D11Ertd636e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cdc42ep4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56699 MGI:1929760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC634710 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	4932435O22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319819 MGI:2442791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	EG667038 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390913 GeneID:667038 MGI:3645286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667038 transcript_id : XM_987895.1

name	LOC100041610 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262496 GeneID:100041610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041610 transcript_id : XM_001476685.1

name	LOC671963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262556 GeneID:671963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC671963 transcript_id : XM_001480141.1

name	LOC667047 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94390915 GeneID:667047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC667047 transcript_id : XM_987941.1

name	BC006965 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262498 GeneID:217294 MGI:2384955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : cDNA sequence BC006965 transcript_id : XM_001476709.1

name	Sox9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368547 GeneID:20682 MGI:98371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 9 transcript_id : NM_011448.3

name	2610035D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390920 GeneID:72386 MGI:1919636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs product : RIKEN cDNA 2610035D17 gene transcript_id : XM_902349.2

name	Slc39a11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803321 GeneID:69806 MGI:1917056
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (metal ion transporter), member 11 transcript_id : NM_027216.4

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665702 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_009217.2

name	Sstr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665698 GeneID:20606 MGI:98328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 2 transcript_id : NM_001042606.1

name	Cog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15011848 GeneID:16834 MGI:1333873
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : component of oligomeric golgi complex 1 transcript_id : NM_013581.2

name	D11Wsu99e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376716 GeneID:28081 MGI:106351
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 99, expressed transcript_id : NM_138598.3

name	D11Wsu47e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370490 GeneID:276852 MGI:106356
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, Wayne State University 47, expressed transcript_id : NM_177777.4

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536223 GeneID:52670 MGI:1277182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_026682.1

name	D11Ertd636e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21536231 GeneID:52670 MGI:1277182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 11, ERATO Doi 636, expressed transcript_id : NM_029794.1

name	Cdc42ep4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910141 GeneID:56699 MGI:1929760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 4 transcript_id : NM_020006.1

name	Sdk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254253 GeneID:237979 MGI:2443847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sidekick homolog 2 (chicken) transcript_id : NM_172800.2

name	LOC100041739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262504 GeneID:100041739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041739 transcript_id : XM_001476930.1

name	EG667038 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390914 GeneID:667038 MGI:3645286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992989.1

name	LOC100041610 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262497 GeneID:100041610
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476735.1

name	LOC671963 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262557 GeneID:671963
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480191.1

name	LOC667047 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94390916 GeneID:667047
definition	codon_start : 1 product : hypothetical protein protein_id : XP_993035.1

name	BC006965 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262499 GeneID:217294 MGI:2384955
definition	codon_start : 1 product : hypothetical protein LOC217294 protein_id : XP_001476759.1

name	Sox9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543761 CCDS:CCDS25595.1 GeneID:20682 MGI:98371
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0001502 - cartilage condensation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0001708 - cell fate specification [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0001942 - hair follicle development [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0019100 - male germ-line sex determination [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SRY-box containing gene 9 protein_id : NP_035578.2

name	2610035D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390921 GeneID:72386 MGI:1919636
definition	codon_start : 1 product : hypothetical protein LOC72386 protein_id : XP_907442.2

name	Slc39a11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053868 GeneID:69806 MGI:1917056
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 39 (metal ion transporter), member 11 protein_id : NP_081492.3

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665703 CCDS:CCDS25598.1 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 2 product : somatostatin receptor 2 isoform B protein_id : NP_033243.2

name	Sstr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665699 GeneID:20606 MGI:98328
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004994 - somatostatin receptor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP]; GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1 product : somatostatin receptor 2 isoform A protein_id : NP_001036071.1

name	Cog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15011849 CCDS:CCDS25599.1 GeneID:16834 MGI:1333873
definition	GO_component : GO:0017119 - Golgi transport complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEP] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence ISS]; GO:0006891 - intra-Golgi vesicle-mediated transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : ldlCp complex assembly note : low density lipoprotein B product : component of oligomeric golgi complex 1 protein_id : NP_038609.2

name	D11Wsu99e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070414 CCDS:CCDS25600.1 GeneID:28081 MGI:106351
definition	codon_start : 1 product : hypothetical protein LOC28081 protein_id : NP_613064.1

name	D11Wsu47e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982246 GeneID:276852 MGI:106356
definition	codon_start : 1 product : hypothetical protein LOC276852 protein_id : NP_808445.2

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536232 CCDS:CCDS25602.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC52670 isoform 2 protein_id : NP_084070.1

name	D11Ertd636e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536224 CCDS:CCDS25603.1 GeneID:52670 MGI:1277182
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC52670 isoform 1 protein_id : NP_080958.1

name	Cdc42ep4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910142 CCDS:CCDS25604.1 GeneID:56699 MGI:1929760
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008360 - regulation of cell shape [Evidence IEA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 note : binder of Rho GTPase 4 product : CDC42 effector protein (Rho GTPase binding) 4 protein_id : NP_064390.1

name	Sdk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254254 CCDS:CCDS25605.1 GeneID:237979 MGI:2443847
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : sidekick 2 protein_id : NP_766388.2

name	LOC100041739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262505 GeneID:100041739
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476980.1

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 1 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 2 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 3 pseudo : _no_value

name	LOC634710 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634710
definition	number : 4 pseudo : _no_value

name	4932435O22Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262558 GeneID:319819 MGI:2442791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 4932435O22 gene transcript_id : XR_035417.1

clone name	MSMg01-440E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075M07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-189C01.b	B6Ng01-189C01.g
ACC	GA013236	GA013237
length	1,104	1,041
definition	B6Ng01-189C01.b	B6Ng01-189C01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(113,347,619 - 113,348,710)	(113,486,763 - 113,487,802)
sequence	gaattcaaacagcaagggaacccttcctattgggttttgggattataatt tcaactcgcaggtcagatgaggcaggcagaactagaatgacaccccaaat atattctccctgactccccagaatcagggattacaataggtcatcagccc agacccaaagtatattccccagcccggatgcctgaccaaggctgggcctg agattcctctagttatggtggaaacaaaatcagagacactaggaagaaga aaggacttatttcctggctggcttgaagacagagctgtgtgaggaggaat gtggacggagctgtgtgaggagagatgaggatgacatacttaagagggta acagaagccctagataacaaacagctaagaaacaggccccgtgcctgcag ctatattgaacttggctaacggacatgaggttagcagagcactcggaatc cacacactatgtcggtcagcagccagcctgagtccagcactcacagaggc cctaacagacaacccagctgtatcctccctgacttctagcccaatctttg ggctgacagatgaggggaacctaaagtcactgaattggcagtcatttgta tacagtgagaacaagataatatatctgcgaaagtggtgagttcttggcca agtggggacagagaacccttcttttgaaccactgaggcaatgggagagca gtcctttgtactggctagttttgtgtcaacttgacacagctggagttatc acagagaaaaggagcttcagttgaggaaatgcctccatgagatacaactg taaggcattttctcaattagtgatcaagggggaagggccccttgtgggtg ggaccgtctctgggctggtaatcttggttctataagagagcaggctgagc aaggcatgagaagcaagccagtaaggaacattcccttccatggcctctgc atcagctcctgcttcctgacctgcttgagttccagttctgactttccttg gtgatgaacagcagtatgggaagccggaataaaccccttttcctcccaaa tttgctctggttcatgatggttggtgcaggaattggaaaacctcttgact aaga	gaattcactttgtagaccaggttggcctcgaactcagaaatccgcctgcc tctgcctcccaagtgctggaattaaaagtgtgcgccaccacgcccggctt cgattcattttctaatcacctttgtgttcatctcagatgctgtgacccca gcgaaactgagcacgcttgtagagaggaagatattttcatatgggcaaac attacaattttggtatggccacaacccttaaagtccttttgggtaaatga ataactgatcgtatctgagagttacattcaaacccgagtttacattctga ctctcacagaatattctcactgtctcttcttactccaacttcacatgttt gaaattgatgaaatacccttcctggcgcaggtgcagcgcctgcgaggcta ggaccatatatatgacaggggccctctaggataaagaatacaaaaccacc ttactttcaattttttttttttacaaaaacgtattattatattattctat gaacatattattatattatcctatgaacatacatactgctcatgctcctc cagtgtctggggatggcccatgcaagacagatgctggaagcttagattgg actgactgtgacgtggcgagtccttttcttcaggttcagcgttgtggtaa ctgtccacctatactagacgcacacgaactagctacttgggcttacaaac acgggacatgtttgtgtgaccggggaggggagaatatacaaatgtaaata tcagatcacaagatttacgtaacgtgttagcacacatacacacaggactt tgatttagttttggtttttccggtttctgccgggcagctgttttccacca ggttacacccaggcaatgatgtcttccgctccggattgtgaattgtctgc ctgcacgaaaccgtttcactttaggggagacgtgaccagaggggtaatac tttcggacaagccagactcaaatctgttctctgacgggtgcgtgtagaca cagcttctgttctagaagcctggggttgattggatagggga
quality values	Open. Hide. 47 22 30 26 58 34 15 52 58 45 25 58 45 52 54 58 58 62 49 41 42 62 62 62 62 62 62 62 62 62 62 62 41 31 20 22 21 21 27 21 27 44 24 32 50 51 38 38 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 46 46 43 37 40 56 54 62 54 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 49 46 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 54 62 62 62 62 54 47 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 54 58 49 41 49 58 58 58 58 58 58 58 58 58 58 58 58 44 52 54 58 58 42 58 58 39 58 58 58 58 58 41 58 58 52 58 58 58 54 54 54 58 58 58 58 54 49 58 58 45 52 54 52 54 54 52 58 58 58 58 54 52 58 54 54 58 54 54 58 58 54 58 58 52 35 58 54 36 35 54 54 54 51 58 46 45 58 58 58 58 49 58 58 58 52 45 58 51 41 58 47 48 50 49 51 50 58 58 49 31 50 32 51 40 50 58 58 43 58 42 45 46 52 58 39 58 36 27 39 58 50 47 50 46 58 58 58 36 40 58 37 49 43 47 50 49 39 20 58 35 50 50 50 58 41 43 51 39 58 22 50 52 46 50 40 51 46 58 46 50 39 42 41 50 58 41 29 50 50 39 39 58 58 58 46 32 51 40 32 33 39 42 52 44 49 50 40 40 50 50 37 39 40 44 58 38 32 42 51 19 33 40 39 38 39 19 54 35 47 51 49 11 30 49 51 23 44 49 54 42 34 42 53 44 41 50 23 32 29 54 31 31 47 24 52 41 28 28 23 40 37 53 23 53 40 29 31 12 49 40 41 44 21 16 44 37 54 21 22 46 54 54 54 45 29 37 26 31 54 38 33 42 40 47 32 37 40 45 37 45 47 40 40 30 25 12 9 46 18 10 41 36 41 31 32 32 31 53 52 32 25 41 47 31 32 14 47 34 21 31 34 32 40 36 47 34 23 30 32 29 8 8 18 31 33 42 31 31 8 8 40 32 28 24 37 19 38 13 51 14 45 30 31 18 9 23 15 32 31 34 13 32 22 20 32 23 13 15 7 25 27 13 46 26 20 34 20 20 22 14 31 27 15 11 17 16 17 31 18 22 11 13 11 21 33 46 42 11 18 13 40 22 27 30 33 13 27 13 31 33 25 12 13 15 27 20 21 30 22 20 33 31 36 18 28 37 18 36 31 27 30 8 18 14 31 19 28 19 31 27 17 31 31 18 17 18 28 23 11 12 5 26 32 20 21 36 13 14 12 10 8 44 25 11 16 31 18 19 21 10 17 36 32 19 19 25 34 11 21 16 37 12 17 17 10 14 25 8 9 43 21 21 25 32 21 16 23 39 17 18 40 32 10 10 24 9 6 12 16 6 32 21 31 48 28 27 7 9 9 9 4 12 9 10 27 22 21 15 16 18 14 17 24 26 10 9 15 16 16 8 6 11 22 21 9 15 12 9 7 24 24 13 16 27 8 7 4 6 7 8 4 6 17 16 7 16	Open. Hide. 62 49 42 41 62 47 42 47 62 62 62 62 20 24 14 31 39 30 16 20 21 21 32 38 44 51 62 62 62 59 59 62 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 54 54 62 56 54 62 54 54 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 44 47 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 54 62 62 62 62 62 62 62 62 62 62 62 52 54 54 58 47 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 54 54 54 58 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 52 54 54 54 54 52 58 47 54 54 58 58 58 58 58 39 58 54 47 58 58 52 58 58 54 54 54 52 58 35 54 48 58 40 58 58 58 58 58 58 49 35 58 53 58 53 46 58 46 58 58 49 54 49 51 58 49 41 51 58 40 37 45 49 51 47 58 49 52 53 51 52 50 50 58 42 58 49 37 50 50 52 46 46 19 54 47 42 45 39 50 49 51 50 53 53 50 58 39 28 50 50 50 54 58 40 51 50 32 53 54 41 40 49 42 53 42 53 38 51 50 50 53 50 52 40 51 40 58 44 50 50 42 40 53 52 32 53 52 47 49 54 54 38 45 52 40 42 23 33 42 50 42 53 40 49 41 46 34 39 42 53 52 54 54 44 44 51 52 42 37 18 49 19 54 54 39 23 8 54 54 30 49 26 54 40 40 32 45 33 54 39 51 49 44 38 23 40 54 36 37 37 51 45 41 12 47 32 39 35 37 25 31 32 41 19 53 33 26 34 28 40 32 34 34 30 32 53 34 32 29 15 40 31 37 32 45 23 41 31 33 27 41 32 45 31 37 38 33 28 42 51 31 31 22 18 47 31 31 33 41 51 51 32 23 31 17 51 51 47 24 27 31 23 31 9 42 42 38 26 17 10 14 22 40 29 30 31 18 26 31 31 25 48 48 42 31 12 15 35 31 14 5 10 14 7 9 10 31 30 44 31 37 32 31 30 26 22 32 37 33 18 37 30 10 11 26 29 33 27 31 31 24 25 21 16 25 8 31 38 22 32 18 24 6 10 32 16 31 21 31 26 32 13 29 24 16 31 14 44 47 44 9 25 20 10 44 21 31 28 22 37 44 18 19 22 43 31 23 29 9 33 10 6 19 30 19 20 20 14 19 37 21 43 34 24 24 21 6 7 14 28 33 48 32 13 16 7 33 24 13 27 14 13 24 27 17 32 11 20 10 11 32 19 10 24 10 30 14 20 24 9 17 22 13 30 7 5 21 3 5 10 16 10 19 12 10 27 6 20 8 12 7 15 24 13 20 7 6 11 9 11 18 13 11 28 10 17 25 9 24 30 7 21 21 3 3 5 7 8 6 3 9 11 8 6 6 9 18 23 25 11 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_113347619_113348710
seq2: B6Ng01-189C01.b_40_1143

seq1  GAATTCAAACAGCAAGGGAACCCTTCCTATTGGGTTTTGGGATTATAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGCAAGGGAACCCTTCCTATTGGGTTTTGGGATTATAATT  50

seq1  TCAACTCGCAGGTCAGATGAGGCAGGCAGAACTAGAATGACACCCCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCGCAGGTCAGATGAGGCAGGCAGAACTAGAATGACACCCCAAAT  100

seq1  ATATTCTCCCTGACTCCCCAGAATCAGGGATTACAATAGGTCATCAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCCCTGACTCCCCAGAATCAGGGATTACAATAGGTCATCAGCCC  150

seq1  AGACCCAAAGTATATTCCCCAGCCCGGATGCCTGACCAAGGCTGGGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAAAGTATATTCCCCAGCCCGGATGCCTGACCAAGGCTGGGCCTG  200

seq1  AGATTCCTCTAGTTATGGTGGAAACAAAATCAGAGACACTAGGAAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTCTAGTTATGGTGGAAACAAAATCAGAGACACTAGGAAGAAGA  250

seq1  AAGGACTTATTTCCTGGCTGGCTTGAAGACAGAGCTGTGTGAGGAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTATTTCCTGGCTGGCTTGAAGACAGAGCTGTGTGAGGAGGAAT  300

seq1  GTGGACGGAGCTGTGTGAGGAGAGATGAGGATGACATACTTAAGAGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACGGAGCTGTGTGAGGAGAGATGAGGATGACATACTTAAGAGGGTA  350

seq1  ACAGAAGCCCTAGATAACAAACAGCTAAGAAACAGGCCCCGTGCCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCCCTAGATAACAAACAGCTAAGAAACAGGCCCCGTGCCTGCAG  400

seq1  CTATATTGAACTTGGCTAACGGACATGAGGTTAGCAGAGCACTCGGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTGAACTTGGCTAACGGACATGAGGTTAGCAGAGCACTCGGAATC  450

seq1  CACACACTATGTCGGTCAGCAGCCAGCCTGAGTCCAGCACTCACAGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTATGTCGGTCAGCAGCCAGCCTGAGTCCAGCACTCACAGAGGC  500

seq1  CCTAACAGACAACCCAGCTGTATCCTCCCTGACTTCTAGCCCAATCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGACAACCCAGCTGTATCCTCCCTGACTTCTAGCCCAATCTTTG  550

seq1  GGCTGACAGATGAGGGGAACCTAAAGTCACTGAATTGGCAGTCATTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACAGATGAGGGGAACCTAAAGTCACTGAATTGGCAGTCATTTGTA  600

seq1  TACAGTGAGAACAAGATAATATATCTGCGAAAGTGGTGAGTTCTTGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAGAACAAGATAATATATCTGCGAAAGTGGTGAGTTCTTGGCCA  650

seq1  AGTGGGGACAGAGAACCCTTCTTTTGAACCACTGAGGCAATGGGAGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGACAGAGAACCCTTCTTTTGAACCACTGAGGCAATGGGAGAGCA  700

seq1  GTCCTTTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATC  750

seq1  ACAGAG-AAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATACAACTG  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATACAACTG  800

seq1  TAAGGCATTTTCTCAATTAGTGATCAAGGGGGAAGGGCCCCTTGTGGGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATTTTCTCAATTAGTGATCAAGGGGGAAGGGCCCCTTGTGGGTG  850

seq1  GGACCGTCTCTGGGCTGGTAATCTTGGTTCTATAAGAGAGCAGGCTGAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGTCTCTGGGCTGGTAATCTTGGTTCTATAAGAGAGCAGGCTGAGC  900

seq1  AAGGCAGGAGAAGCAAGCCAGTAAGGAACAT--CCCTCCATGGCCTCTGC  947
      |||||| ||||||||||||||||||||||||  || ||||||||||||||
seq2  AAGGCATGAGAAGCAAGCCAGTAAGGAACATTCCCTTCCATGGCCTCTGC  950

seq1  ATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC-TTCCTTG  996
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  ATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGACTTTCCTTG  1000

seq1  GTGATGAACAGCAGTAT-GGAAGCC-GAATAAACCC--TTTCCTCCCCAA  1042
      ||||||||||||||||| ||||||| ||||||||||  ||||||||| ||
seq2  GTGATGAACAGCAGTATGGGAAGCCGGAATAAACCCCTTTTCCTCCCAAA  1050

seq1  TTTGCTTCTTGGTCATGAT-GTTTGTGCAGGAATAG--AAAC--CCTGAC  1087
      ||||| ||| | ||||||| ||| |||||||||| |  ||||  | ||||
seq2  TTTGC-TCTGGTTCATGATGGTTGGTGCAGGAATTGGAAAACCTCTTGAC  1099

seq1  TAAGA  1092
      |||||
seq2  TAAGA  1104

seq1: chr11_113486763_113487802
seq2: B6Ng01-189C01.g_65_1105 (reverse)

seq1  TCCCCTATCC-ATC-ACACCCGGCTTCTAGAACAG-AGCTGTGTTCTACA  47
      |||||||||| ||| || || |||||||||||||| ||||||| ||||||
seq2  TCCCCTATCCAATCAACCCCAGGCTTCTAGAACAGAAGCTGTG-TCTACA  49

seq1  CGCACCCCGTTCAGAGAACAGGATTTGAGTCTGGCTTGTCCGAAAGTA-T  96
      |||||||   |||||||||| ||||||||||||||||||||||||||| |
seq2  CGCACCC--GTCAGAGAACA-GATTTGAGTCTGGCTTGTCCGAAAGTATT  96

seq1  ACCCCTCTGGTCACGTCTCCCCTAAAGTG-AACGTTTTCGTGCAGGCAGA  145
      ||||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  ACCCCTCTGGTCACGTCTCCCCTAAAGTGAAACGGTTTCGTGCAGGCAGA  146

seq1  CAATTCACAATCCGGAGCGGAAGACATCATTGCCTGGGTGTGACCTGGTG  195
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAATTCACAATCCGGAGCGGAAGACATCATTGCCTGGGTGTAACCTGGTG  196

seq1  GAAAACAGCTGCCCGGCAGAAACCGGAAAAACCAAAACTAAATCAAAGTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCTGCCCGGCAGAAACCGGAAAAACCAAAACTAAATCAAAGTC  246

seq1  CTGTGTGTATGTGTGCTAACACGTTACGTAAATCTTGTGATCTGATATTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTATGTGTGCTAACACGTTACGTAAATCTTGTGATCTGATATTT  296

seq1  ACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGTGTTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGTGTTTG  346

seq1  TAAGCCCAAGTAGCTAGTTCGTGTGCGTCTAGTATAGGTGGACAGTTACC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCAAGTAGCTAGTTCGTGTGCGTCTAGTATAGGTGGACAGTTACC  396

seq1  ACAACGCTGAACCTGAAGAAAAGGACTCGCCACGTCACAGTCAGTCCAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGCTGAACCTGAAGAAAAGGACTCGCCACGTCACAGTCAGTCCAAT  446

seq1  CTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGAGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGAGGA  496

seq1  GCATGAGCAGTATGTATGTTCATAGGATAATATAATAATATGTTCATAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCAGTATGTATGTTCATAGGATAATATAATAATATGTTCATAGA  546

seq1  ATAATATAATAATACGTTTTTGTAAAAAAAAAAAATTGAAAGTAAGGTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAATAATACGTTTTTGTAAAAAAAAAAAATTGAAAGTAAGGTGG  596

seq1  TTTTGTATTCTTTATCCTAGAGGGCCCCTGTCATATATATGGTCCTAGCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTCTTTATCCTAGAGGGCCCCTGTCATATATATGGTCCTAGCC  646

seq1  TCGCAGGCGCTGCACCTGCGCCAGGAAGGGTATTTCATCAATTTCAAACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGGCGCTGCACCTGCGCCAGGAAGGGTATTTCATCAATTTCAAACA  696

seq1  TGTGAAGTTGGAGTAAGAAGAGACAGTGAGAATATTCTGTGAGAGTCAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTTGGAGTAAGAAGAGACAGTGAGAATATTCTGTGAGAGTCAGA  746

seq1  ATGTAAACTCGGGTTTGAATGTAACTCTCAGATACGATCAGTTATTCATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACTCGGGTTTGAATGTAACTCTCAGATACGATCAGTTATTCATT  796

seq1  TACCCAAAAGGACTTTAAGGGTTGTGGCCATACCAAAATTGTAATGTTTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAAGGACTTTAAGGGTTGTGGCCATACCAAAATTGTAATGTTTG  846

seq1  CCCATATGAAAATATCTTCCTCTCTACAAGCGTGCTCAGTTTCGCTGGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATGAAAATATCTTCCTCTCTACAAGCGTGCTCAGTTTCGCTGGGG  896

seq1  TCACAGCATCTGAGATGAACACAAAGGTGATTAGAAAATGAATCGAAGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCATCTGAGATGAACACAAAGGTGATTAGAAAATGAATCGAAGCC  946

seq1  GGGCGTGGTGGCGCACACTTTTAATTCCAGCACTTGGGAGGCAGAGGCAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGTGGTGGCGCACACTTTTAATTCCAGCACTTGGGAGGCAGAGGCAG  996

seq1  GCGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAAAGTGAATTC  1040
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAAAGTGAATTC  1041

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