BAC Information

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BAC

Clone NameB6Ng01-189N06
Chromosome11 (Build37)
Map Location 40,182,847 - 40,183,741
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256, LOC100039285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N06.bB6Ng01-189N06.g
ACCGA013745GA013746
length1,097996
definitionB6Ng01-189N06.b B6Ng01-189N06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacactataaaaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttattacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattcttttcttcagagatttgaagtttttatcata
cagatctttcaccttctttagttagagtcacgccaagataattttatatt
atttgtgactatggagaagggtggttgttcccctaatttctttctcagcc
tgtttattctttgaatagaagaatggccattgacttgtttggagttttat
ttttattgtccagctacttcatacggagagctggtttatcaatggtt
gaattcattgcctatgtgggatttacagtaaagtgtattgttgctgtggt
ttgagcatttgtatcttcccacactcattattgtgatctactccacaagg
atacagtattaaagggtatgtggtgggactagaaaagtgggaaggctatg
aggttagaactcttaagaatagttagtatatgtatttagatttccagaga
tcttctttttatggctctttgaagcaggaaagacagttgttatcctgcca
ttcagatcatgttatttcctattcttcatggcagtgaagctgaaaccctc
attcatatttacacacaggttttcagagttctgactcttacgtatttact
ggccatcccctggtcatgtccactcacataaagtttcctctttcccctct
gctggtatactcatctctatcaccaacaatggttgtttttgcagtttcct
atagaattccttgcaagtataaccatgctgtttaatattgctccttgtgc
ttagcataacattttggagatgcatctatgctactgtattaccactcagt
tggtgtatctttattaagtggtattttgttgtgtggtgtgcttttgtgct
atttttcagtttggggctattttgaataaagaaacagctcatttgcatgc
tttatgcaaactatgatatggagttttgttttattatttctttttaggta
gataacaaggagtaggattctgatgttgggtggaaaaatgtacattttta
cactatgaattagttggtaatcttccaaagttttaaaatatttttccatt
tctcattaagcagtgtgtgagcgtccccagtagcttacatttctcattct
ccctttgggtgcctttcttgtttaagggattgtgatcattctagaacata
atgcattgacaccttcatgtagctaaaattcattatagtttctaatcaca
tacacgtttggggaaaactgaaaggtgtactgtggaaaacttctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40182847_40183741
seq2: B6Ng01-189N06.g_148_1057 (reverse)

seq1  CTAGAAGTTT--CACTGTACACC-TTCAGTTT--CCCAAACTGGTATGTG  45
      ||||||||||  ||| ||||||| ||||||||  |||||||  |||||||
seq2  CTAGAAGTTTTCCACAGTACACCTTTCAGTTTTCCCCAAACGTGTATGTG  50

seq1  AATTAG-AACTAT-ATGAATTTTAGCTACAATGAA-GTGTCAATGCA-TA  91
       ||||| |||||| ||||||||||||||| ||||| ||||||||||| ||
seq2  -ATTAGAAACTATAATGAATTTTAGCTAC-ATGAAGGTGTCAATGCATTA  98

seq1  TGTTCTAGAATGATCACAATCACTAAAACAAGAAAAGCACACAAA-GGAG  140
      ||||||||||||||||||||| || |||||||||| |||| |||| ||||
seq2  TGTTCTAGAATGATCACAATCCCTTAAACAAGAAAGGCACCCAAAGGGAG  148

seq1  AATGAGAAATGTAAGCTACT-GGGACGCTCACACACTGC-TAATGAG-AA  187
      |||||||||||||||||||| |||||||||||||||||| ||||||| ||
seq2  AATGAGAAATGTAAGCTACTGGGGACGCTCACACACTGCTTAATGAGAAA  198

seq1  TGG-AAAATATTTTAAAACTTTGGAAGATTACCAACT-ATTCATAGTGT-  234
      ||| ||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  TGGAAAAATATTTTAAAACTTTGGAAGATTACCAACTAATTCATAGTGTA  248

seq1  AAAATGTACATTTTTCCACCCAACATCAGAATCCTACTCCTTGTTATCTA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTACATTTTTCCACCCAACATCAGAATCCTACTCCTTGTTATCTA  298

seq1  CCTAAAAAGAAATAAT-AAACAAAACTCCATATCATAGTTTGCATAAAGC  333
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTAAAAAGAAATAATAAAACAAAACTCCATATCATAGTTTGCATAAAGC  348

seq1  ATGCAAATGAGCTGTTTCTTTATTCAAAATAGCCCCAAACTGAAAAATAG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATGAGCTGTTTCTTTATTCAAAATAGCCCCAAACTGAAAAATAG  398

seq1  CACAAAAGCACACCACACAACAAAATACCACTTAATAAAGATACACCAAC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGCACACCACACAACAAAATACCACTTAATAAAGATACACCAAC  448

seq1  TGAGTGGTAATACAGTAGCATAGATGCATCTCCAAAATGTTATGCTAAGC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGTAATACAGTAGCATAGATGCATCTCCAAAATGTTATGCTAAGC  498

seq1  ACAAGGAGCAATATTAAACAGCATGGTTATACTTGCAAGGAATTCTATAG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGCAATATTAAACAGCATGGTTATACTTGCAAGGAATTCTATAG  548

seq1  GAAACTGCAAAAACAACCATTGTTGGTGATAGAGATGAGTATACCAGCAG  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCAAAAACAACCATTGTTGGTGATAGAGATGAGTATACCAGCAG  598

seq1  AGGGGAAAGAGGAAACTTTATGTGAGTGGACATGACCAGGGGATGGCCAG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAGAGGAAACTTTATGTGAGTGGACATGACCAGGGGATGGCCAG  648

seq1  TAAATACGTAAGAGTCAGAACTCTGAAAACCTGTGTGTAAATATGAATGA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACGTAAGAGTCAGAACTCTGAAAACCTGTGTGTAAATATGAATGA  698

seq1  GGGTTTCAGCTTCACTGCCATGAAGAATAGGAAATAACATGATCTGAATG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCAGCTTCACTGCCATGAAGAATAGGAAATAACATGATCTGAATG  748

seq1  GCAGGATAACAACTGTCTTTCCTGCTTCAAAGAGCCATAAAAAGAAGATC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATAACAACTGTCTTTCCTGCTTCAAAGAGCCATAAAAAGAAGATC  798

seq1  TCTGGAAATCTAAATACATATACTAACTATTCTTAAGAGTTCTAACCTCA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAATCTAAATACATATACTAACTATTCTTAAGAGTTCTAACCTCA  848

seq1  TAGCCTTCCCACTTTTCTAGTCCCACCACATACCCTTTAATACTGTATCC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCCCACTTTTCTAGTCCCACCACATACCCTTTAATACTGTATCC  898

seq1  TTGTGGAGTAGA  895
      ||||||||||||
seq2  TTGTGGAGTAGA  910