MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-189N09
Chromosome	11 (Build37)
Map Location	16,435,606 - 16,588,545
singlet/doublet	doublet
Overlap gene	LOC665689, LOC627583
Upstream gene	LOC665660, Vstm2, Sec61g, Akt2-ps
Downstream gene	Egfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665660 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Vstm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211739 MGI:2384826
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec61g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20335 MGI:1202066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akt2-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111116 MGI:108506
definition	note : thymoma viral proto-oncogene 2, pseudogene pseudo : _no_value

name	LOC665689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 275 ESTs, 8 Proteins pseudo : _no_value

name	LOC627583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Egfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13649 MGI:95294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2810442I21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 20 ESTs

name	A630050E13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319701 MGI:2442569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plek (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56193 MGI:1860485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1500041B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380686 MGI:1917505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042644 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 439 ESTs

name	Ppp3r1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19058 MGI:107172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pno1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66249 MGI:1913499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI553587 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103784 MGI:2144224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57316 MGI:1927354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 Proteins pseudo : _no_value

name	EG665748 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Vstm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122404 GeneID:211739 MGI:2384826
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : V-set and transmembrane domain containing 2 transcript_id : NM_145967.1

name	Sec61g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981498 GeneID:20335 MGI:1202066
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC61, gamma subunit transcript_id : NM_011343.2

name	Egfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403617 GeneID:13649 MGI:95294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor receptor transcript_id : NM_207655.2

name	Egfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403618 GeneID:13649 MGI:95294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor receptor transcript_id : NM_007912.4

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389909 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : RIKEN cDNA 2810442I21 gene, transcript variant 5 transcript_id : XM_901424.2

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261668 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479196.1

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261664 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479171.1

name	2810442I21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261666 GeneID:72735 MGI:1919985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs product : RIKEN cDNA 2810442I21 gene transcript_id : XM_001479191.1

name	A630050E13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342516 GeneID:319701 MGI:2442569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630050E13 gene transcript_id : NM_176982.2

name	Plek (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11464970 GeneID:56193 MGI:1860485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin transcript_id : NM_019549.1

name	1500041B16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802989 GeneID:380686 MGI:1917505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500041B16 gene transcript_id : NM_029861.2

name	LOC100042644 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261670 GeneID:100042644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 439 ESTs product : similar to ribosomal protein L39 transcript_id : XM_001479229.1

name	Ppp3r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794596 GeneID:19058 MGI:107172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) transcript_id : NM_024459.2

name	Pno1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145526 GeneID:66249 MGI:1913499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : partner of NOB1 homolog (S. cerevisiae) transcript_id : NM_025443.2

name	AI553587 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145529 GeneID:103784 MGI:2144224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI553587 transcript_id : NM_178909.4

name	C1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354885 GeneID:57316 MGI:1927354
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear DNA binding protein transcript_id : NM_020558.3

name	EG665748 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261620 GeneID:665748 MGI:3645846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG665748 transcript_id : XM_979177.2

name	Vstm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122405 CCDS:CCDS24441.1 GeneID:211739 MGI:2384826
definition	codon_start : 1 note : novel transcript product : V-set and transmembrane domain containing 2 protein_id : NP_666079.1

name	Sec61g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755450 GeneID:20335 MGI:1202066
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015450 - protein translocase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SEC61, gamma subunit protein_id : NP_035473.1

name	Egfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560582 CCDS:CCDS24443.1 GeneID:13649 MGI:95294
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005006 - epidermal growth factor receptor activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence ISS]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA] [Evidence ISS]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; avian erythroblastic leukemia viral (v-erb-b) oncogene homolog; waved 2 product : epidermal growth factor receptor isoform 1 protein_id : NP_997538.1

name	Egfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681283 CCDS:CCDS24444.1 GeneID:13649 MGI:95294
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005006 - epidermal growth factor receptor activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence ISS]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA] [Evidence ISS]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; avian erythroblastic leukemia viral (v-erb-b) oncogene homolog; waved 2 product : epidermal growth factor receptor isoform 2 protein_id : NP_031938.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933716 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 isoform 5 protein_id : XP_906517.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261667 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479241.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261669 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479246.1

name	2810442I21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261665 GeneID:72735 MGI:1919985
definition	codon_start : 1 product : hypothetical protein LOC72735 protein_id : XP_001479221.1

name	A630050E13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892819 CCDS:CCDS24445.1 GeneID:319701 MGI:2442569
definition	codon_start : 1 note : novel F-box domain containing protein product : hypothetical protein LOC319701 protein_id : NP_795956.1

name	Plek (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11464971 CCDS:CCDS24446.1 GeneID:56193 MGI:1860485
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : pleckstrin protein_id : NP_062422.1

name	1500041B16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000629 CCDS:CCDS24447.1 GeneID:380686 MGI:1917505
definition	codon_start : 1 product : hypothetical protein LOC380686 protein_id : NP_084137.1

name	LOC100042644 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261671 GeneID:100042644
definition	codon_start : 1 product : similar to ribosomal protein L39 protein_id : XP_001479279.1

name	Ppp3r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794597 CCDS:CCDS24448.1 GeneID:19058 MGI:107172
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0007507 - heart development [Evidence IMP] codon_start : 1 note : PP2B beta 1 product : protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) protein_id : NP_077779.2

name	Pno1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384846 CCDS:CCDS24449.1 GeneID:66249 MGI:1913499
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : putatative 28 kDa protein protein_id : NP_079719.1

name	AI553587 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725770 CCDS:CCDS24450.1 GeneID:103784 MGI:2144224
definition	codon_start : 1 product : hypothetical protein LOC103784 protein_id : NP_849240.1

name	C1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542251 CCDS:CCDS24451.1 GeneID:57316 MGI:1927354
definition	GO_component : GO:0017053 - transcriptional repressor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016922 - ligand-dependent nuclear receptor binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA] codon_start : 1 note : small unique nuclear co-repressor product : nuclear DNA-binding protein protein_id : NP_065583.2

name	EG665748 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261621 GeneID:665748 MGI:3645846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984271.2

name	LOC665660 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665660
definition	number : 1 pseudo : _no_value

name	LOC382486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382486
definition	number : 2 pseudo : _no_value

name	LOC382486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382486
definition	number : 1 pseudo : _no_value

name	LOC665689 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261663 GeneID:665689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 275 ESTs, 8 Proteins product : similar to ubiquitin-like domain containing CTD phosphatase 1 pseudo : _no_value transcript_id : XR_001770.2

name	LOC627583 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261619 GeneID:627583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to RIKEN cDNA 2610208M17 gene pseudo : _no_value transcript_id : XR_032980.1

clone name	MSMg01-480J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425L12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-150I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-189N09.b	B6Ng01-189N09.g
ACC	GA013751	GA013752
length	1,177	1,027
definition	B6Ng01-189N09.b	B6Ng01-189N09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(16,435,606 - 16,436,791)	(16,587,516 - 16,588,545)
sequence	gaattcaagatatcaccacaacagagtggtatcttaaccctgccttctaa ggctagtgagtatatctgcagaagatgaccttaagcagaaataagagaga aaaaaggggggtgaataactgacaaagtagaagagaaaatgtttctagta gatcccagtttattctagaagctcagaagcatcagggaacccatgcaaca gatgagcagaaatcagaggtgtctctggagcccagtacagaggaacagga ccagtggaggaacaggtattgacaggatgggttgggaggagcttaaaggc ctaacattctacatactaaaccttttcatctgcttcagactgtacatgtg acagttgcacctttaggaatacagtgtgtctcctgtacccatgagcctgg ccgtctgaactttggtgcactgtgttactgagataatgagagagttgtgc aaagcaaggcatataatgggtaatgtaatgcgtctggcattcaggaacaa gtgcttgcatgggggagcaagagtggtcttctggttaaatcaaggcctgt atctttgagtaagaacaaatggcgtgagagataagattagctttagctaa caggaaaagaaagatatccaattctgtgggacattaaagggacatttctt tgcctcacatgtgaagacaccctgaaggaagaagctaggcctgccatggc catcttgtctgagagggaattccacctcttctgcttctggagtacatcac tgcccagtgttgctactatgctacagccggtacccctgtcctgccaagaa gtcagacaaggtcacggcaggctttcttacatgggctaaggcttcttcca gtttctcttcaagtcagtcaagctataggatctggcaagcaccaggtttc tgcagggtactggctgggattttccactgtactccagctgatgcaatttc cactaccattatgcccatcatttgcttgctattatttttagtactactgt agttttattttttgaaaaaaaatctatattttattttgttattttcatgt aagtcaagtacagaaaactgcaacatcttcaagagtttctatttccccct tctcattcaatctcatgctctacagccatcgtaaaattccaaaaattgtc acagaagaattcttcttattattaata	gaattctttgtctggcagatcttctaagttgtgcttagaggtggtcattg agaataaccacttctgaactacctctttacctagaatcttaaaagtagtc cctgatattttcttcacttcacagcctgcctcctatgttttggtaaaagc aagtaatttggacaaaggaaagtctattgtctttcttcaatgtttaatag cctcagttaaaaggatggagtaacagtgaaaggcaaggaagggatatata ctcaatgtgaccactttggagaaacaagtagaggtgactgtggcctgaga tctcgattcttttttataggtatcaacatgaattttcaaattcaatctaa aaaatattttcaaaagatgagaaatatgatatcatgcagttctgataatg atattatctgtttcatcattgtcttaattctggttttacaagataatccc tattgtttgagggtataaattgattttaagaaatgattacattttttcag ggtgcaagttttcctgtgaggtaatcaccttcctgtgagatggtagaatg ttccagaagtcagaaacatgatgcacttccgtacttttgatgagttatat atgcaagtaagtatattttgtatatcaatataagcagtttccaactatat tcttttacttttagtgcctcttttaaaacagtaacaggtttttcatggtt tatatcttagccaaacctatgcaagatacaaatctataagttttcaggaa aatggtctttaaaaaaaaaaatctgttttcaaaacttacaaagaaacttt aaggtttatacacaattataatgaattaagtgaaatcataatagtaaatt tgggatggttattcttctctgttcttttagttttaaagttaatcagtttg ggtaaaatatttgttaaataatttaattttttttaccataaaggtaaaga gtgtttcacatagttaggtcaaaataccaaattttattcttaaacctcat cataaacccattagaaaaaaacacttt
quality values	Open. Hide. 58 31 34 27 62 38 22 25 43 38 33 47 39 47 39 62 47 42 49 62 62 47 47 62 62 56 62 62 59 59 62 59 62 24 19 18 18 31 29 23 36 32 25 28 25 28 34 30 34 59 54 54 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 59 59 50 50 49 40 35 45 48 56 48 49 43 38 48 48 54 56 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 54 62 62 54 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 54 58 54 58 58 58 58 58 58 58 58 58 58 58 41 45 54 58 58 58 58 54 54 58 58 48 58 54 58 54 54 58 58 58 58 58 58 58 54 58 52 58 52 58 51 58 54 58 44 58 58 58 54 58 58 58 54 53 58 48 54 46 58 58 50 42 35 58 54 51 58 58 58 54 49 51 58 49 48 58 50 49 48 58 58 58 58 58 52 58 58 51 49 46 29 42 53 58 58 37 58 47 58 53 58 58 52 58 58 58 51 34 50 58 43 37 58 46 39 58 58 49 41 43 51 58 54 53 58 58 54 49 41 49 51 50 41 53 40 51 58 51 54 51 54 50 47 39 30 51 58 58 49 47 58 47 24 46 50 58 50 58 58 32 51 49 43 43 54 40 58 51 58 52 46 27 50 50 49 44 40 34 54 53 44 33 35 39 53 52 47 54 32 49 20 54 34 52 52 34 42 44 50 39 49 42 49 53 51 39 50 32 49 40 44 35 49 37 46 50 46 23 37 35 40 31 53 42 42 52 38 46 28 54 49 36 31 18 46 42 42 43 35 45 23 33 33 42 38 39 42 45 34 40 31 33 34 40 31 52 35 33 31 53 51 47 31 37 32 32 52 33 52 16 47 23 53 40 53 31 18 32 32 32 24 47 30 26 37 14 46 21 32 36 31 24 46 24 27 22 46 18 30 51 31 43 30 30 31 36 21 31 27 41 40 31 31 30 41 23 46 16 33 14 26 33 26 20 36 32 35 38 47 28 31 27 25 25 29 31 11 33 31 26 31 23 15 26 33 21 31 21 31 31 33 38 18 30 31 31 29 29 32 31 29 13 21 27 33 34 28 32 35 32 17 32 26 48 33 43 33 31 27 18 20 46 31 24 31 31 21 37 31 25 21 27 46 25 16 23 46 46 20 24 32 15 21 21 26 16 32 32 34 23 31 23 29 31 31 32 33 11 31 21 32 21 19 47 17 26 31 21 25 31 32 30 21 31 31 26 29 24 31 22 48 34 25 16 15 19 30 39 18 23 17 13 21 31 22 28 30 37 18 28 31 48 48 47 17 20 11 5 14 32 32 27 34 19 7 4 9 18 24 36 31 19 15 11 36 26 7 4 5 8 11 30 22 15 40 19 22 7 6 17 12 24 28 24 24 38 34 19 6 3 32 40 31 11 4 6 18 14 34 34 21 13 13 10 28 16 7 11 6 8 9 9 21 6 5 3 3 4 6 5 13 17 14 12 10 14 20 13 5 9 12 5 13 16 11 13 19 6 8 23 5 16 28 9 18 7 20 9 22 9 9 28 17 30 8 7 8 8 8 23 13 6 7 9 22 18 11 5 10 9 7 3 2 1 2 2 3 3 1 1 5 8 17 7 21 7 3 1 11 15 14 1 4 22 4 4 15 25 24 28 16 10 6 5 3 5 8 5 5 2 7 20 4 5 17 4 8 16 7 5 21 5 8 8 4 5 2 2 1 6 1 5 4	Open. Hide. 62 44 37 47 62 62 62 62 62 62 56 59 30 36 23 31 23 13 46 43 37 28 28 28 26 31 39 62 62 62 62 62 54 62 62 59 62 56 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 49 43 46 48 48 46 48 54 62 59 59 54 42 49 54 62 62 54 54 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 49 59 62 62 59 54 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 59 62 62 62 62 62 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 56 62 62 62 62 62 62 62 62 62 47 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 54 52 62 62 52 62 62 62 62 62 62 62 62 62 54 52 52 58 52 54 54 38 58 52 54 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 52 58 47 58 58 47 58 52 58 45 29 58 58 54 58 48 45 47 58 58 52 58 58 58 53 58 58 46 54 52 42 58 54 54 58 58 58 58 58 58 58 58 58 58 51 52 58 58 58 58 51 51 33 58 58 53 45 42 53 53 53 58 51 58 58 49 50 49 58 51 41 58 50 58 37 58 53 46 58 58 58 58 40 51 46 47 51 50 51 51 53 53 54 47 58 52 53 58 58 49 58 51 58 38 29 54 54 51 40 53 53 36 46 52 53 58 58 51 39 52 47 58 58 58 50 52 40 49 50 50 58 58 50 49 58 58 41 58 58 51 51 41 41 41 36 41 43 40 21 54 39 54 54 54 49 40 36 45 54 44 31 33 47 42 42 37 53 53 53 45 53 33 54 53 30 51 40 50 49 50 42 45 49 44 29 33 52 34 26 37 35 44 36 35 45 53 33 34 53 37 46 27 53 54 54 53 34 31 7 54 32 49 51 45 30 28 25 22 32 46 52 12 14 49 47 47 52 52 51 51 47 47 41 32 53 35 39 23 53 53 53 40 26 52 52 42 27 16 18 28 41 30 46 40 34 33 46 33 36 36 51 30 33 23 14 46 23 51 26 30 31 20 30 20 31 7 33 32 33 12 11 22 30 29 42 27 14 14 30 25 15 27 34 43 31 46 36 38 32 18 31 30 42 42 31 31 34 37 46 39 39 46 31 22 46 19 41 23 31 46 8 23 8 6 46 33 21 43 41 36 37 21 34 25 15 25 34 46 48 24 32 24 28 48 48 18 31 48 31 31 15 14 21 23 31 32 20 31 27 29 15 18 13 31 23 31 48 38 38 23 15 13 25 17 36 18 24 26 39 32 21 23 37 14 39 16 30 21 11 39 29 9 37 31 43 23 31 26 23 32 21 26 43 25 18 24 17 25 39 22 12 31 10 15 31 16 48 29 25 6 16 5 5 11 11 9 6 7 3 3 8 18 22 34 40 12 12 15 14 15 18 26 28 13 47 40 18 13 11 14 30 14 15 12 29 15 13 5 27 24 24 15 28 20 24 16 32 18 21 34 19 3 3 5 12 5 5 4 27 28 26 28 18 8 10 10 18 28 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_16435606_16436791
seq2: B6Ng01-189N09.b_42_1218

seq1  GAATTCAAGATATCACCACAACAGAGTGGTATCTTAACCCTGCCTTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATATCACCACAACAGAGTGGTATCTTAACCCTGCCTTCTAA  50

seq1  GGCTAGTGAGTATATCTGCAGAAGATGACCTTAAGCAGAAATAAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTGAGTATATCTGCAGAAGATGACCTTAAGCAGAAATAAGAGAGA  100

seq1  AAAAAGGGGGGTGAATAACTGACAAAGTAGAAGAGAAAATGTTTCTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGGGGTGAATAACTGACAAAGTAGAAGAGAAAATGTTTCTAGTA  150

seq1  GATCCCAGTTTATTCTAGAAGCTCAGAAGCATCAGGGAACCCATGCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAGTTTATTCTAGAAGCTCAGAAGCATCAGGGAACCCATGCAACA  200

seq1  GATGAGCAGAAATCAGAGGTGTCTCTGGAGCCCAGTACAGAGGAACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCAGAAATCAGAGGTGTCTCTGGAGCCCAGTACAGAGGAACAGGA  250

seq1  CCAGTGGAGGAACAGGTATTGACAGGATGGGTTGGGAGGAGCTTAAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGAGGAACAGGTATTGACAGGATGGGTTGGGAGGAGCTTAAAGGC  300

seq1  CTAACATTCTACATACTAAACCTTTTCATCTGCTTCAGACTGTACATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTCTACATACTAAACCTTTTCATCTGCTTCAGACTGTACATGTG  350

seq1  ACAGTTGCACCTTTAGGAATACAGTGTGTCTCCTGTACCCATGAGCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCACCTTTAGGAATACAGTGTGTCTCCTGTACCCATGAGCCTGG  400

seq1  CCGTCTGAACTTTGGTGCACTGTGTTACTGAGATAATGAGAGAGTTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTGAACTTTGGTGCACTGTGTTACTGAGATAATGAGAGAGTTGTGC  450

seq1  AAAGCAAGGCATATAATGGGTAATGTAATGCGTCTGGCATTCAGGAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGGCATATAATGGGTAATGTAATGCGTCTGGCATTCAGGAACAA  500

seq1  GTGCTTGCATGGGGGAGCAAGAGTGGTCTTCTGGTTAAATCAAGGCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCATGGGGGAGCAAGAGTGGTCTTCTGGTTAAATCAAGGCCTGT  550

seq1  ATCTTTGAGTAAGAACAAATGGCGTGAGAGATAAGATTAGCTTTAGCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGAGTAAGAACAAATGGCGTGAGAGATAAGATTAGCTTTAGCTAA  600

seq1  CAGGAAAAGAAAGATATCCAATTCTGTGGGACATTAAAGGGACATTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAGAAAGATATCCAATTCTGTGGGACATTAAAGGGACATTTCTT  650

seq1  TGCCTCACATGTGAAGACACCCTGAAGGAAGAAGCTAGGCCTGCCATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACATGTGAAGACACCCTGAAGGAAGAAGCTAGGCCTGCCATGGC  700

seq1  CATCTTGTCTGAGAGGGAATTCCACCTCTTCTGCTTCTGGAGTACATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTCTGAGAGGGAATTCCACCTCTTCTGCTTCTGGAGTACATCAC  750

seq1  TGCCCAGTGTTGCTACTATGCTACAGCCGGTACCCCTGTCCTGCCAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTGTTGCTACTATGCTACAGCCGGTACCCCTGTCCTGCCAAGAA  800

seq1  GTCAGACAAGGTCACGGCAGGCTTTCTTACATGGGCTAAGGCTTCTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACAAGGTCACGGCAGGCTTTCTTACATGGGCTAAGGCTTCTTCCA  850

seq1  GTTTCTCTTCAAGTCAGTCAAGCTATAGGATCTGGCAAGCACCAGGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTCAAGTCAGTCAAGCTATAGGATCTGGCAAGCACCAGGTTTC  900

seq1  TGCAGGGTACTGGCTGGGATTTTCCACTGTACTCCAGCTGATGCAAATTT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCAGGGTACTGGCTGGGATTTTCCACTGTACTCCAGCTGATGC-AATTT  949

seq1  CCACTACCATTATGCCCATCATTTGCTTGCTATTATTTTTAGTACTACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCATTATGCCCATCATTTGCTTGCTATTATTTTTAGTACTACTG  999

seq1  TAGTTTTATTTTTTGAAAAAAAAATCTATATTTTAATTTTTGTAATTTTC  1050
      ||||||||||||||| |||||||||||||||||||  |||||| ||||||
seq2  TAGTTTTATTTTTTG-AAAAAAAATCTATATTTTA--TTTTGTTATTTTC  1046

seq1  ATGTAAGTTCAAAGTTAACAGAAAACTGCAACAATCCTTCAAAGAGTTTC  1100
      ||||||||   ||||  ||||||||||||||||   |||| |||||||||
seq2  ATGTAAGT--CAAGT--ACAGAAAACTGCAACA--TCTTC-AAGAGTTTC  1089

seq1  TATT--CCCCCTCTCATCAAATCTCATTGTTCTAAACAGCCATCGTAAAA  1148
      ||||  |||| ||||||  ||||||| || |||  ||||||||||| |||
seq2  TATTTCCCCCTTCTCATTCAATCTCA-TGCTCT--ACAGCCATCGT-AAA  1135

seq1  ATATCAAAAATTGTCAACAAGAAGAA----TCT--CTATTAATA  1186
      ||  ||||||||||||   |||||||    |||   ||||||||
seq2  ATTCCAAAAATTGTCA--CAGAAGAATTCTTCTTATTATTAATA  1177

seq1: chr11_16587516_16588545
seq2: B6Ng01-189N09.g_68_1094 (reverse)

seq1  AAAGTGTTTTTTTTTCCTTATTGGGGTTTATGATGAGGTTTAAGAATAAA  50
      |||||||||||||   || ||  |||||||||||||||||||||||||||
seq2  AAAGTGTTTTTTT---CTAAT--GGGTTTATGATGAGGTTTAAGAATAAA  45

seq1  ATTTTGGTATTTTGACCTTACTATGTGAAACACTTCTTTACCTTTATGGT  100
      | |||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  A-TTTGGTATTTTGACCTAACTATGTGAAACAC-TCTTTACCTTTATGGT  93

seq1  AAAAAAA--TTAATTATTTAACAAATATTTTACCCAAACTGATTAACTTT  148
      |||||||  | |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTAAATTATTTAACAAATATTTTACCCAAACTGATTAACTTT  143

seq1  AAAACTAAAAGAACAGAGAAGAATAACCAT-CCAAATTTACTATTATGAT  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAACTAAAAGAACAGAGAAGAATAACCATCCCAAATTTACTATTATGAT  193

seq1  TTCACTTAATTCATTATAATTGTGTATAAACCTTAAAGTTTCTTTGTAAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAATTCATTATAATTGTGTATAAACCTTAAAGTTTCTTTGTAAG  243

seq1  TTTTGAAAACAGA-TTTTTTTTTTAAAGACCATTTTCCTGAAAACTTATA  296
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAACAGATTTTTTTTTTTAAAGACCATTTTCCTGAAAACTTATA  293

seq1  GATTTGTATCTTGCATAGGTTTGGCTAAGATATAAACCATGAAAAACCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTATCTTGCATAGGTTTGGCTAAGATATAAACCATGAAAAACCTG  343

seq1  TTACTGTTTTAAAAGAGGCACTAAAAGTAAAAGAATATAGTTGGAAACTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTTTAAAAGAGGCACTAAAAGTAAAAGAATATAGTTGGAAACTG  393

seq1  CTTATATTGATATACAAAATATACTTACTTGCATATATAACTCATCAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTGATATACAAAATATACTTACTTGCATATATAACTCATCAAAA  443

seq1  GTACGGAAGTGCATCATGTTTCTGACTTCTGGAACATTCTACCATCTCAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGAAGTGCATCATGTTTCTGACTTCTGGAACATTCTACCATCTCAC  493

seq1  AGGAAGGTGATTACCTCACAGGAAAACTTGCACCCTGAAAAAATGTAATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGATTACCTCACAGGAAAACTTGCACCCTGAAAAAATGTAATC  543

seq1  ATTTCTTAAAATCAATTTATACCCTCAAACAATAGGGATTATCTTGTAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAAAATCAATTTATACCCTCAAACAATAGGGATTATCTTGTAAA  593

seq1  ACCAGAATTAAGACAATGATGAAACAGATAATATCATTATCAGAACTGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATTAAGACAATGATGAAACAGATAATATCATTATCAGAACTGCA  643

seq1  TGATATCATATTTCTCATCTTTTGAAAATATTTTTTAGATTGAATTTGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCATATTTCTCATCTTTTGAAAATATTTTTTAGATTGAATTTGAA  693

seq1  AATTCATGTTGATACCTATAAAAAAGAATCGAGATCTCAGGCCACAGTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTTGATACCTATAAAAAAGAATCGAGATCTCAGGCCACAGTCA  743

seq1  CCTCTACTTGTTTCTCCAAAGTGGTCACATTGAGTATATATCCCTTCCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTTGTTTCTCCAAAGTGGTCACATTGAGTATATATCCCTTCCTT  793

seq1  GCCTTTCACTGTTACTCCATCCTTTTAACTGAGGCTATTAAACATTGAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCACTGTTACTCCATCCTTTTAACTGAGGCTATTAAACATTGAAG  843

seq1  AAAGACAATAGACTTTCCTTTGTCCAAATTACTTGCTTTTACCAAAACAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAATAGACTTTCCTTTGTCCAAATTACTTGCTTTTACCAAAACAT  893

seq1  AGGAGGCAGGCTGTGAAGTGAAGAAAATATCAGGGACTACTTTTAAGATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCAGGCTGTGAAGTGAAGAAAATATCAGGGACTACTTTTAAGATT  943

seq1  CTAGGTAAAGAGGTAGTTCAGAAGTGGTTATTCTCAATGACCACCTCTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTAAAGAGGTAGTTCAGAAGTGGTTATTCTCAATGACCACCTCTAA  993

seq1  GCACAACTTAGAAGATCTGCCAGACAAAGAATTC  1030
      ||||||||||||||||||||||||||||||||||
seq2  GCACAACTTAGAAGATCTGCCAGACAAAGAATTC  1027

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Alignment Information