MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-190I04
Chromosome	11 (Build37)
Map Location	34,370,370 - 34,371,258
singlet/doublet	singlet
Overlap gene	Dock2
Upstream gene	Ranbp17, Gabrp, D130052B06Rik, Kcnip1, Kcnmb1, Lcp2, Foxi1, EG574403
Downstream gene	Dock2, Ccdc99, LOC100038976, Slit3, LOC100039006
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ranbp17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66011 MGI:1929706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabrp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216643 MGI:2387597
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D130052B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216644 MGI:2685092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70357 MGI:1917607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnmb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16533 MGI:1334203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lcp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16822 MGI:1321402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Foxi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14233 MGI:1096329
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dock2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94176 MGI:2149010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG574403 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:574403 MGI:3643491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dock2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94176 MGI:2149010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc99 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70385 MGI:1917635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038976 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038976
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Slit3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20564 MGI:1315202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein pseudo : _no_value

name	Ranbp17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13249348 GeneID:66011 MGI:1929706
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAN binding protein 17 transcript_id : NM_023146.1

name	Gabrp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131004 GeneID:216643 MGI:2387597
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, pi transcript_id : NM_146017.3

name	Kcnip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754024 GeneID:70357 MGI:1917607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kv channel-interacting protein 1 transcript_id : NM_027398.2

name	Kcnmb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381129 GeneID:16533 MGI:1334203
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium large conductance calcium-activated channel, subfamily M, beta member 1 transcript_id : NM_031169.3

name	Lcp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130099 GeneID:16822 MGI:1321402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphocyte cytosolic protein 2 transcript_id : NM_010696.3

name	Foxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802758 GeneID:14233 MGI:1096329
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box I1 transcript_id : NM_023907.3

name	Dock2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553624 GeneID:94176 MGI:2149010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cyto-kinesis 2 transcript_id : NM_033374.2

name	EG574403 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701577 GeneID:574403 MGI:3643491
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG574403 transcript_id : NM_001025382.1

name	Dock2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553624 GeneID:94176 MGI:2149010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cyto-kinesis 2 transcript_id : NM_033374.2

name	Ccdc99 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22296586 GeneID:70385 MGI:1917635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 99 transcript_id : NM_027411.1

name	LOC100038976 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261848 GeneID:100038976
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100038976 transcript_id : XM_001472048.1

name	Slit3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378369 GeneID:20564 MGI:1315202
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : slit homolog 3 (Drosophila) transcript_id : NM_011412.2

name	Ranbp17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13249349 CCDS:CCDS24534.1 GeneID:66011 MGI:1929706
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA]; GO:0008536 - Ran GTPase binding [Evidence TAS] GO_process : GO:0006913 - nucleocytoplasmic transport [Evidence TAS]; GO:0000059 - protein import into nucleus, docking [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAN binding protein 17 protein_id : NP_075635.1

name	Gabrp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122485 CCDS:CCDS24535.1 GeneID:216643 MGI:2387597
definition	GO_component : GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA] codon_start : 1 product : gamma-aminobutyric acid (GABA-A) receptor, pi protein_id : NP_666129.1

name	Kcnip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754025 CCDS:CCDS24537.1 GeneID:70357 MGI:1917607
definition	GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : A-type potassium channel modulatory protein 1.2; potassium channel interacting protein 1 product : Kv channel-interacting protein 1 protein_id : NP_081674.2

name	Kcnmb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981659 CCDS:CCDS24538.1 GeneID:16533 MGI:1334203
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : BK channel beta subunit product : potassium large conductance calcium-activated channel, subfamily M, beta member 1 protein_id : NP_112446.2

name	Lcp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543115 GeneID:16822 MGI:1321402
definition	GO_process : GO:0050663 - cytokine secretion [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0045576 - mast cell activation [Evidence IMP] codon_start : 1 product : lymphocyte cytosolic protein 2 protein_id : NP_034826.2

name	Foxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229265 CCDS:CCDS24539.1 GeneID:14233 MGI:1096329
definition	GO_component : GO:0005634 - nucleus [Evidence IC]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IDA] [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007605 - sensory perception of sound [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : forkhead homolog 10; HNF-3/forkhead homolog 3 product : forkhead box I1 protein_id : NP_076396.2

name	Dock2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553625 GeneID:94176 MGI:2149010
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0030675 - Rac GTPase activator activity [Evidence IMP] GO_process : GO:0046631 - alpha-beta T cell activation [Evidence IMP]; GO:0046633 - alpha-beta T cell proliferation [Evidence IMP]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0001768 - establishment of T cell polarity [Evidence IMP]; GO:0001771 - formation of immunological synapse [Evidence IMP]; GO:0001766 - lipid raft polarization [Evidence IMP]; GO:0045060 - negative thymic T cell selection [Evidence IMP]; GO:0035022 - positive regulation of Rac protein signal transduction [Evidence IC]; GO:0045059 - positive thymic T cell selection [Evidence IMP]; GO:0042110 - T cell activation [Evidence IMP]; GO:0042098 - T cell proliferation [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy product : dedicator of cyto-kinesis 2 protein_id : NP_203538.2

name	EG574403 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701578 GeneID:574403 MGI:3643491
definition	codon_start : 1 product : hypothetical protein LOC574403 protein_id : NP_001020553.1

name	Dock2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553625 GeneID:94176 MGI:2149010
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0030675 - Rac GTPase activator activity [Evidence IMP] GO_process : GO:0046631 - alpha-beta T cell activation [Evidence IMP]; GO:0046633 - alpha-beta T cell proliferation [Evidence IMP]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0001768 - establishment of T cell polarity [Evidence IMP]; GO:0001771 - formation of immunological synapse [Evidence IMP]; GO:0001766 - lipid raft polarization [Evidence IMP]; GO:0045060 - negative thymic T cell selection [Evidence IMP]; GO:0035022 - positive regulation of Rac protein signal transduction [Evidence IC]; GO:0045059 - positive thymic T cell selection [Evidence IMP]; GO:0042110 - T cell activation [Evidence IMP]; GO:0042098 - T cell proliferation [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy product : dedicator of cyto-kinesis 2 protein_id : NP_203538.2

name	Ccdc99 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22296587 CCDS:CCDS24541.1 GeneID:70385 MGI:1917635
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 99 protein_id : NP_081687.1

name	LOC100038976 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261849 GeneID:100038976
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472098.1

name	Slit3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83523732 CCDS:CCDS24542.1 GeneID:20564 MGI:1315202
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005102 - receptor binding [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IGI] [Evidence IMP] codon_start : 1 exception : mismatches in translation product : slit homolog 3 protein_id : NP_035542.1

name	D130052B06Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261596 GeneID:216644 MGI:2685092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D130052B06 gene transcript_id : XR_035087.1

name	LOC100039006 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261851 GeneID:100039006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_030636.1

clone name	MSMg01-344I01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-172N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-190I04.b	B6Ng01-190I04.g
ACC	GA014248	GA014249
length	324	891
definition	B6Ng01-190I04.b	B6Ng01-190I04.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	tataaccgcattaattcatggaagttaatctttatgttgatctgcaggaa atctgcccaatagggtgggctaatacccaggaatcattagactgtgtaat agtgacaggaaaaggagtatcagttgcaagaagcaatcctgagatgaagt cttttgggactttgcctctcagttcactcatcttaggccacgccccccca aaaaaggtgggccaccaccaagaaagtcaccttctagccttaacctctcc tagatggctcctgacagaagactactaaggaatgagagaggggcgaggga gaggggaaagagagagggggaagg	gaattcaaatgtgtgtgacttttgggatatatctgtatcacctcctcttt aaaattcttgtaactcagagctggggagatggttcaaaggaaaagcgcct actgccgaagggatgggagcaaccatgcatgctttaaccccagtgcagta ggggtggaaacagaggatcccagctacctagtctagccaaattggaatct gtgtcctacatggagaatgataaggaaacatgacattaacctggcaaggg cacctaagtgcatgcatgtgcatgtcatatacacccaaccacatcacaca gaggtaggggagctggtaaggagggagagggcagagaagtaggaaggaag agggaagagtcagggagagagaggaataaaaaggttctctggtttccgtc agttcacccttcctaccatagctatgcaactgtggcgtgcctagtcatta tagggctttcacttgttttaaaaaaaatcctattttatgttagctataaa atatatgtgatagatgcttacaagccttgagtgttaaatctctgcgatca aagtgggaggttgtttaggaatttcagtaggcatccagaataaagctgga gaatcacatctcttctgggggatctactactgtgtaattagcactgattc tattgaggttcctgaagccattttagtcattactgagtcccatgatctct aaatagcctgtgctgtctggcttgggaggcgtattttggcctgtaagttc caaacgaggagatgttcatcatggcaaggcctggaacaggggagtgatga tctggttgttgtaattttggttatgttttctggagtgatccatgaattgt cactaaaaaaaatgagttggggggagatggtagtgtattgt
quality values	Open. Hide. 62 46 62 62 62 62 62 62 62 62 62 54 62 62 54 62 43 43 59 62 62 49 49 43 62 59 59 62 59 62 62 62 62 62 59 59 62 62 59 62 59 62 62 59 62 59 62 62 59 62 62 59 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 38 27 24	Open. Hide. 46 49 62 42 62 44 42 62 62 54 54 42 44 38 29 28 38 29 29 56 59 62 62 62 62 62 59 49 62 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 49 42 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 54 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 49 58 41 58 58 58 58 58 58 58 58 41 49 52 58 58 54 58 53 58 51 58 58 54 54 58 58 54 52 54 58 54 42 58 58 48 58 54 58 47 52 58 54 54 52 58 58 58 54 58 58 58 54 41 58 52 49 58 53 51 52 58 58 58 50 58 58 51 53 58 58 58 58 58 51 25 50 54 50 58 47 47 51 51 58 49 58 50 53 51 48 54 41 53 53 53 47 48 58 39 39 58 51 53 52 37 51 51 39 35 54 50 37 50 58 50 58 49 54 32 50 58 31 50 58 58 50 51 52 52 53 42 51 51 38 52 58 58 41 29 39 51 58 52 42 52 49 36 39 53 53 52 39 41 58 53 53 45 39 39 54 52 54 42 51 54 49 53 39 52 52 51 54 36 33 33 51 54 49 39 24 54 40 44 33 42 29 54 49 42 46 34 23 44 37 53 53 35 37 31 30 35 32 33 19 44 46 40 32 31 8 54 32 28 33 26 37 39 15 40 35 43 40 40 34 25 40 37 32 30 22 40 24 36 33 31 27 46 32 30 28 16 52 49 47 39 27 34 32 45 32 45 43 31 38 35 51 27 19 34 32 33 42 42 21 18 33 20 46 41 10 7 10 11 32 15 25 36 18 32 29 8 20 15 26 9 23 10 7 17 12 23 21 25 12 10 14 13 8 12 29 30 25 10 7 31 9 6 6 11 25 24 25 37 23 25 32 31 11 13 19 31 31 32 39 31 6 12 6 32 21 27 9 14 15 9 11 19 7 24 20 31 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_34370370_34371258
seq2: B6Ng01-190I04.g_66_956 (reverse)

seq1  ACAATCCACTAACATCT-CCCCCAACTCA-TTTTTTTAGTGACAACTCAT  48
      ||||| ||||| ||||| ||||||||||| ||||||||||||||| ||||
seq2  ACAATACACTACCATCTCCCCCCAACTCATTTTTTTTAGTGACAATTCAT  50

seq1  GGATCACTCCAAGAAAACATAACC-AAATTACAACAACCAGATCATCACT  97
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  GGATCACTCC-AGAAAACATAACCAAAATTACAACAACCAGATCATCACT  99

seq1  CCCCTGTTCCAGGCCTTGCCATGATGAACATCTCCTCGTTTGGAACTTAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTTCCAGGCCTTGCCATGATGAACATCTCCTCGTTTGGAACTTAC  149

seq1  AGGCCAAAATACGCCTCCCAAGCCAGACAGCACAGGCTATTTAGAGATCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAATACGCCTCCCAAGCCAGACAGCACAGGCTATTTAGAGATCA  199

seq1  TGGGACTCAGTAATGACTAAAATGGCTTCAGGAACCTCAATAGAATCAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCAGTAATGACTAAAATGGCTTCAGGAACCTCAATAGAATCAGT  249

seq1  GCTAATTACACAGTAGTAGATCCCCCAGAAGAGATGTGATTCTCCAGCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTACACAGTAGTAGATCCCCCAGAAGAGATGTGATTCTCCAGCTT  299

seq1  TATTCTGGATGCCTACTGAAATTCCTAAACAACCTCCCACTTTGATCGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGATGCCTACTGAAATTCCTAAACAACCTCCCACTTTGATCGCA  349

seq1  GAGATTTAACACTCAAGGCTTGTAAGCATCTATCACATATATTTTATAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTAACACTCAAGGCTTGTAAGCATCTATCACATATATTTTATAGC  399

seq1  TAACATAAAATAGGATTTTTTTTAAAACAAGTGAAAGCCCTATAATGACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAAAATAGGATTTTTTTTAAAACAAGTGAAAGCCCTATAATGACT  449

seq1  AGGCACGCCACAGTTGCATAGCTATGGTAGGAAGGGTGAACTGACGGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACGCCACAGTTGCATAGCTATGGTAGGAAGGGTGAACTGACGGAAA  499

seq1  CCAGAGAACCTTTTTATTCCTCTCTCTCCCTGACTCTTCCCTCTTCCTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAACCTTTTTATTCCTCTCTCTCCCTGACTCTTCCCTCTTCCTTC  549

seq1  CTACTTCTCTGCCCTCTCCCTCCTTACCAGCTCCCCTACCTCTGTGTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTCTGCCCTCTCCCTCCTTACCAGCTCCCCTACCTCTGTGTGAT  599

seq1  GTGGTTGGGTGTATATGACATGCACATGCATGCACTTAGGTGCCCTTGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGGGTGTATATGACATGCACATGCATGCACTTAGGTGCCCTTGCC  649

seq1  AGGTTAATGTCATGTTTCCTTATCATTCTCCATGTAGGACACAGATTCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAATGTCATGTTTCCTTATCATTCTCCATGTAGGACACAGATTCCA  699

seq1  ATTTGGCTAGACTAGGTAGCTGGGATCCTCTGTTTCCACCCCTACTGCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTAGACTAGGTAGCTGGGATCCTCTGTTTCCACCCCTACTGCAC  749

seq1  TGGGGTTAAAGCATGCATGGTTGCTCCCATCCCTTCGGCAGTAGGCGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTAAAGCATGCATGGTTGCTCCCATCCCTTCGGCAGTAGGCGCTT  799

seq1  TTCCTTTGAACCATCTCCCCAGCTCTGAGTTACAAGAATTTTAAAGAGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGAACCATCTCCCCAGCTCTGAGTTACAAGAATTTTAAAGAGGA  849

seq1  GGTGATACAGATATATCCCAAAAGTCACACACATTTGAATTC  889
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACAGATATATCCCAAAAGTCACACACATTTGAATTC  891

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information