BAC Information

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BAC

Clone NameB6Ng01-190O13
Chromosome11 (Build37)
Map Location 12,352,255 - 12,480,469
singlet/doubletdoublet
Overlap geneCobl
Upstream geneZpbp, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190O13.bB6Ng01-190O13.g
ACCGA014546GA014547
length1,1301,107
definitionB6Ng01-190O13.b B6Ng01-190O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,352,255 - 12,353,390)(12,479,352 - 12,480,469)
sequence
gaattccactctgggacatttgtcttagaccactttctattgttggaacc
aaatgccacagattaggaaatgtacaaagatttccttggtccacggtcct
ggagacagaaaaatctaaagcatggcacccacacttgctcagcatcggat
acagctatgccctgcgttactgggtaataaagtagagcttctgggtaaag
tgggctctcattaccttttctgaaaagccactaatgccagcatggggcac
aattatgatcttcaattctagttacctcccaaatacttctccatcaaaag
accaatttgggaaatacatttccaacatataaagattgggggacacttac
aagccatagccacattatactgttggataaactggtaaagccatttttcc
aatagtgtattttgagtatgttgataatcatgcttttacattatatatag
gaccctaatgtgggctcatttcccctcttgatgattaagttctactgcca
gtttgcttctgttcttttaaagggcatcacatatagcaccaggcacaatt
attagagcttgacaacgacacttgccagacagcaggtgagccatgttttg
gcgtgtatgaaatcactagttcagtgtttccagtgtaatgaaaactatga
taacatatagcactcacaggccttcattttcaaaataagctattgcttct
ctcactgccatataacctatactttgtaaaataggttggttaaatgacag
taaagatgaatgttttcaaaagccttcttagagagctaatgtaaagcact
ataatctcagattaatgctcttttattcactcactggaagcagagctatg
gataaatgatttttaccccttatagagtctaaggacataaaacctaatgg
aatgagaaaggaaaagttccctatgtgaagccatccatcatgtcactgtg
ttatcaaggtgacactgtcactggttggtggggcaccctgccctatctgg
acagaggactttcaaacaaacaaacaaacaaaacaaacaaacaaacaaaa
cagggcacctctaaatgactctagatgttatagaatatactgttcattag
tttagctcaacctactgggtccagcctccc

gaattccttctttggggccaatatgaatggatgttgtgcaaaataataga
tgcctttagcctacattcatgtattcattgcagatttattgatttacgat
ctttcattccttatctgaaaatattaaaacgaaaataataatacagggga
ttttctttcctctagtgtctgcataatcctctacgtctccctttatgcac
tggaaggctttaacctgaaagcttatttttcaaatgaacttgaccagtct
tttttttatttaggttgtgacttctttttgtgcctatgttaatattgtcc
acacccgtgccagatagcaagtgtgctggcttatgattagaaggtttcag
gggctaattctggataaataaaatagccttttcttttgaatgcatgtggg
tattttccgtatattattttagtaaaatgcaaactgtatagatctgaata
ttcattttgcctttgtgtactttttgatcttaatttaagtgaattctctt
ggggaattgtcattttccaaaacatcaatgccgtctcctctttttaatcc
cctttctcatccatctccagaggtgtgagatatagacacgcagacactca
tgcacatacacatacccatatgtacacacaatagtagaagtagaagaaga
attgagtgcctcactgagtcagacaaaaacaaagaagaatacaagggagt
tactcttaaaggattatcagtggctatcatttagagccgttagtagtttt
ttagtccttagaataagtagaatttggtcaatggctacaaaataatcact
gtcctcccaatgtttaccgggcctgaagcacctctaggaccccactaccg
ttttccaacattctgtttcattagcagcctcctgtgaagatgcaccaagc
taagtggcagagagcacgagtgctggaactacttttccgtgatggggctt
cccatccgatgggtttaggaaaggatatttctgttgacagtgataagtat
ttccactgaacattttgaaaaaacctaagcgtgatgttttccatcttagc
tgcctcggctcgttctgtgatcagcgcgccacccaagtggctaaggcatt
ccgcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12352255_12353390
seq2: B6Ng01-190O13.b_46_1175

seq1  GAATTCCACTCTGGGACATTTGTCTTAGACCACTTTCTATTGTTGGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTGGGACATTTGTCTTAGACCACTTTCTATTGTTGGAACC  50

seq1  AAATGCCACAGATTAGGAAATGTACAAAGATTTCCTTGGTCCACGGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCACAGATTAGGAAATGTACAAAGATTTCCTTGGTCCACGGTCCT  100

seq1  GGAGACAGAAAAATCTAAAGCATGGCACCCACACTTGCTCAGCATCGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGAAAAATCTAAAGCATGGCACCCACACTTGCTCAGCATCGGAT  150

seq1  ACAGCTATGCCCTGCGTTACTGGGTAATAAAGTAGAGCTTCTGGGTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATGCCCTGCGTTACTGGGTAATAAAGTAGAGCTTCTGGGTAAAG  200

seq1  TGGGCTCTCATTACCTTTTCTGAAAAGCCACTAATGCCAGCATGGGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCTCATTACCTTTTCTGAAAAGCCACTAATGCCAGCATGGGGCAC  250

seq1  AATTATGATCTTCAATTCTAGTTACCTCCCAAATACTTCTCCATCAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGATCTTCAATTCTAGTTACCTCCCAAATACTTCTCCATCAAAAG  300

seq1  ACCAATTTGGGAAATACATTTCCAACATATAAAGATTGGGGGACACTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTTGGGAAATACATTTCCAACATATAAAGATTGGGGGACACTTAC  350

seq1  AAGCCATAGCCACATTATACTGTTGGATAAACTGGTAAAGCCATTTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAGCCACATTATACTGTTGGATAAACTGGTAAAGCCATTTTTCC  400

seq1  AATAGTGTATTTTGAGTATGTTGATAATCATGCTTTTACATTATATATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGTATTTTGAGTATGTTGATAATCATGCTTTTACATTATATATAG  450

seq1  GACCCTAATGTGGGCTCATTTCCCCTCTTGATGATTAAGTTCTACTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTAATGTGGGCTCATTTCCCCTCTTGATGATTAAGTTCTACTGCCA  500

seq1  GTTTGCTTCTGTTCTTTTAAAGGGCATCACATATAGCACCAGGCACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTCTGTTCTTTTAAAGGGCATCACATATAGCACCAGGCACAATT  550

seq1  ATTAGAGCTTGACAACGACACTTGCCAGACAGCAGGTGAGCCATGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCTTGACAACGACACTTGCCAGACAGCAGGTGAGCCATGTTTTG  600

seq1  GCGTGTATGAAATCACTAGTTCAGTGTTTCCAGTGTAATGAAAACTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTATGAAATCACTAGTTCAGTGTTTCCAGTGTAATGAAAACTATGA  650

seq1  TAACATATAGCACTCACAGGCCTTCATTTTCAAAATAAGCTATTGCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATAGCACTCACAGGCCTTCATTTTCAAAATAAGCTATTGCTTCT  700

seq1  CTCACTGCCATATAACCTATACTTTGTAAAATAGGTTGGTTAAATGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCCATATAACCTATACTTTGTAAAATAGGTTGGTTAAATGACAG  750

seq1  TAAAGATGAATGTTTTCAAAAGCCTTCTTAGAGAGCTAATGTAAAGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGAATGTTTTCAAAAGCCTTCTTAGAGAGCTAATGTAAAGCACT  800

seq1  ATAATCTCAGATTAATGCTCTTTTATTCACTCACTGGAAGCAGAGCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTCAGATTAATGCTCTTTTATTCACTCACTGGAAGCAGAGCTATG  850

seq1  GATAAATGATTTTTACCCCTTATAGAGTCTAAGGACATAAAACCTAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGATTTTTACCCCTTATAGAGTCTAAGGACATAAAACCTAATGG  900

seq1  AATGAGAAAGGAAAAGTTCCCTATGTGAAGCCATCCATCATGTCACTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAGGAAAAGTTCCCTATGTGAAGCCATCCATCATGTCACTGTG  950

seq1  TTATCAAGGTGACACTGTCACTGGTTGGTGGGGCACCCTGCCCTATCTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGGTGACACTGTCACTGGTTGGTGGGGCACCCTGCCCTATCTGG  1000

seq1  ACAGAGGACTTTCAAACAAAACAAAACAAAACAAAACAAAACAAAACAAA  1050
      ||||||||||||||||| |||||||   ||||||||| |||||||   ||
seq2  ACAGAGGACTTTCAAAC-AAACAAA--CAAACAAAAC-AAACAAA--CAA  1044

seq1  ACAAAACAGGGCAACCTCTAAATGACTCTTAGATGTTATAG-ATATACTG  1099
      |||||||||||| ||||||||||||||| |||||||||||| ||||||||
seq2  ACAAAACAGGGC-ACCTCTAAATGACTC-TAGATGTTATAGAATATACTG  1092

seq1  TTCA-TAGTTTAGCTCAA-CTACT-GGTCCAGCTCCTCCC  1136
      |||| ||||||||||||| ||||| |||||||  ||||||
seq2  TTCATTAGTTTAGCTCAACCTACTGGGTCCAG--CCTCCC  1130


seq1: chr11_12479352_12480469
seq2: B6Ng01-190O13.g_70_1176 (reverse)

seq1  CACGCGGAAATGCTTTAGCCAC-TGGGTGGCGCCGCTGAACCACAGAAAC  49
      ||||||| ||||| |||||||| ||||||||| ||||| | |||||||  
seq2  CACGCGG-AATGCCTTAGCCACTTGGGTGGCG-CGCTG-ATCACAGAA--  45

seq1  CGAG-CGAGGCAGGCTAAGATGAAAAACATCACGCTTAGGTTTTTTTCAA  98
      |||| ||||||| ||||||||| |||||||||||||||||||||||   |
seq2  CGAGCCGAGGCA-GCTAAGATGGAAAACATCACGCTTAGGTTTTTT--CA  92

seq1  AAATGTTTCAGTTGGAAATACTTAATCACTTGTTCAACAGAAATATCCTT  148
      ||||| ||||| ||||||||||| ||||||   |||||||||||||||||
seq2  AAATG-TTCAG-TGGAAATACTT-ATCACT--GTCAACAGAAATATCCTT  137

seq1  TCCTAAA-CCATCGGATGGGAAGCCCCATCACGGAAAAGTAGTTCCAGCA  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACCCATCGGATGGGAAGCCCCATCACGGAAAAGTAGTTCCAGCA  187

seq1  CTCGTGCTCTCCTGCCACTTAGCTTGGTGCATCTTCACAGGAGGCTGCTA  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCTCT-CTGCCACTTAGCTTGGTGCATCTTCACAGGAGGCTGCTA  236

seq1  ATGAAACAGAATGTTGGAAAACGGTAGTGGGGTCCTAGAGGTGCTTCAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAGAATGTTGGAAAACGGTAGTGGGGTCCTAGAGGTGCTTCAGG  286

seq1  CCCGGTAAACATTGGGAGGACAGTGATTATTTTGTAGCCATTGACCAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTAAACATTGGGAGGACAGTGATTATTTTGTAGCCATTGACCAAAT  336

seq1  TCTACTTATTCTAAGGACTAAAAAACTACTAACGGCTCTAAATGATAGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTATTCTAAGGACTAAAAAACTACTAACGGCTCTAAATGATAGCC  386

seq1  ACTGATAATCCTTTAAGAGTAACTCCCTTGTATTCTTCTTTGTTTTTGTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAATCCTTTAAGAGTAACTCCCTTGTATTCTTCTTTGTTTTTGTC  436

seq1  TGACTCAGTGAGGCACTCAATTCTTCTTCTACTTCTACTATTGTGTGTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGTGAGGCACTCAATTCTTCTTCTACTTCTACTATTGTGTGTAC  486

seq1  ATATGGGTATGTGTATGTGCATGAGTGTCTGCGTGTCTATATCTCACACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTATGTGTATGTGCATGAGTGTCTGCGTGTCTATATCTCACACC  536

seq1  TCTGGAGATGGATGAGAAAGGGGATTAAAAAGAGGAGACGGCATTGATGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGATGGATGAGAAAGGGGATTAAAAAGAGGAGACGGCATTGATGT  586

seq1  TTTGGAAAATGACAATTCCCCAAGAGAATTCACTTAAATTAAGATCAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAATGACAATTCCCCAAGAGAATTCACTTAAATTAAGATCAAAA  636

seq1  AGTACACAAAGGCAAAATGAATATTCAGATCTATACAGTTTGCATTTTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACAAAGGCAAAATGAATATTCAGATCTATACAGTTTGCATTTTAC  686

seq1  TAAAATAATATACGGAAAATACCCACATGCATTCAAAAGAAAAGGCTATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATATACGGAAAATACCCACATGCATTCAAAAGAAAAGGCTATT  736

seq1  TTATTTATCCAGAATTAGCCCCTGAAACCTTCTAATCATAAGCCAGCACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATCCAGAATTAGCCCCTGAAACCTTCTAATCATAAGCCAGCACA  786

seq1  CTTGCTATCTGGCACGGGTGTGGACAATATTAACATAGGCACAAAAAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATCTGGCACGGGTGTGGACAATATTAACATAGGCACAAAAAGAA  836

seq1  GTCACAACCTAAATAAAAAAAAGACTGGTCAAGTTCATTTGAAAAATAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAACCTAAATAAAAAAAAGACTGGTCAAGTTCATTTGAAAAATAAG  886

seq1  CTTTCAGGTTAAAGCCTTCCAGTGCATAAAGGGAGACGTAGAGGATTATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGTTAAAGCCTTCCAGTGCATAAAGGGAGACGTAGAGGATTATG  936

seq1  CAGACACTAGAGGAAAGAAAATCCCCTGTATTATTATTTTCGTTTTAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTAGAGGAAAGAAAATCCCCTGTATTATTATTTTCGTTTTAATA  986

seq1  TTTTCAGATAAGGAATGAAAGATCGTAAATCAATAAATCTGCAATGAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGATAAGGAATGAAAGATCGTAAATCAATAAATCTGCAATGAATA  1036

seq1  CATGAATGTAGGCTAAAGGCATCTATTATTTTGCACAACATCCATTCATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATGTAGGCTAAAGGCATCTATTATTTTGCACAACATCCATTCATA  1086

seq1  TTGGCCCCAAAGAAGGAATTC  1118
      |||||||||||||||||||||
seq2  TTGGCCCCAAAGAAGGAATTC  1107


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