BAC Information

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BAC

Clone NameB6Ng01-190P21
Chromosome11 (Build37)
Map Location 67,585,839 - 67,779,637
singlet/doubletdoublet
Overlap geneLOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r
Downstream geneStx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190P21.bB6Ng01-190P21.g
ACCGA014607GA014608
length1,140152
definitionB6Ng01-190P21.b B6Ng01-190P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,778,491 - 67,779,637)(67,585,839 - 67,585,990)
sequence
gaattccagcacttggatggctgaggcaggaaatatacatacaggcaaca
tatgtaccatacatgcatgaatacatacatacatacatacatacataaaa
atagttgcatactgtactaaaacgtttttagtgatttttttaaatttttc
ttttaaaaagaagtatcaatgccatgttttttatagcaacctattcatca
taggcaattctctgtgctcaattattctgtgttcaattatttttaataat
catcacgaggggcttaattgtatagtttttaaaaagtcacagacctgtac
acgggagaggaggaaatttaccttgtgcacttagcgtcaacctaccacct
acatttccagaatggataaaatacatactaaggaagtcctcccaacattt
gcaagaggggaaatcaactcaaacacagtgggctgggtttctgctcctgc
atgaacctagcacgcatgcgtgcgccagttaccatgacgaccaggagacg
ctgcaccctggagttgaagaatcaatgagctgaaactctccaggatggaa
gaacaagttttacccgagctggatgtagcagaactggagcttcaggctgt
gatcggcttcaatggtgagaccttgagcaaccatgatttgatgcctcagg
gacagtgagacgctgacctggtagcgcctgagaggcagtgggaatagcgg
caagagtgtggccaggcaccacccgccccaggatggtggcagatctgggc
ctcattcctgagcctcaggaactggcatgggtgtaagagctcagataaag
ctcctccagagaccaaatgagcctaactcggtaggagtatgaataagggt
ctttcccaaagtaagaactcaaaggtttaagaccaggatagaaagggaag
taggacattaagggagaaacctttttaattctggaaggggccttcttgtg
gtgctcacactttatttgtgactgtcgtgtaaatatgagagagaaatgct
gtgattggggtcgtgtttggcgtgtagcgaaagcaaggagttaattttag
gggcaaatgatttttaaacgaatgtaatgtgcctgaaagcttacggttga
aggaatgccggttcggaacgaattcagagtaataaaggtt
aaaccttaatgataaaaagatcagtctggaaatggctcccagatgggctt
ttatggtggtgtgatttctacagtcaatatggtcatctctttgggaccac
agagaatgggaggaagtggagggagggaagaaaacatgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67778491_67779637
seq2: B6Ng01-190P21.b_48_1187 (reverse)

seq1  AACCTTTATTTACTCTGTAATCGTTCCGCACC-GCATCCTTTCAACGGTA  49
      |||||||| |||||||| | |||||||| ||| |||| | |||||| || 
seq2  AACCTTTA-TTACTCTGAATTCGTTCCGAACCGGCATTCCTTCAACCGT-  48

seq1  AAGCTTTCAGGCAC--TACATTCGTTTTAAAAAATCAATTTTCCCCCTAA  97
      ||||||||||||||  |||||||||||  ||||||||  ||| |||||||
seq2  AAGCTTTCAGGCACATTACATTCGTTT--AAAAATCA--TTTGCCCCTAA  94

seq1  AATTTAACTCCTTGCCTTTTCGCTACACGCCAAACACGACCCCCAATCAC  147
      || ||||||||||||  |||||||||||||||||||||| ||||||||||
seq2  AA-TTAACTCCTTGC--TTTCGCTACACGCCAAACACGA-CCCCAATCAC  140

seq1  AGCATTTCTCTCTCAATATTTACCACGACAGTCACAAATAAAGTGTGAGC  197
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  AGCATTTCTCTCTC-ATATTTA-CACGACAGTCACAAATAAAGTGTGAGC  188

seq1  ACCACAAGAAGGCCCC-TCCAGAATTAAAAAGGTTTCTCCCTTAATGTCC  246
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCACAAGAAGGCCCCTTCCAGAATTAAAAAGGTTTCTCCCTTAATGTCC  238

seq1  TACTTCCC-TTCTATCCTGGTCTTAAACCTTTGAGTTCTTACTTTGGGAA  295
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCCTTTCTATCCTGGTCTTAAACCTTTGAGTTCTTACTTTGGGAA  288

seq1  AGACCCTTATTCATACTCCTACCGAGTTAGGCTCATTTGGTCTCTGGAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTATTCATACTCCTACCGAGTTAGGCTCATTTGGTCTCTGGAGG  338

seq1  AGCTTTATCTGAGCTCTTACACCCATGCCAGTTCCTGAGGCTCAGGAATG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATCTGAGCTCTTACACCCATGCCAGTTCCTGAGGCTCAGGAATG  388

seq1  AGGCCCAGATCTGCCACCATCCTGGGGCGGGTGGTGCCTGGCCACACTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGATCTGCCACCATCCTGGGGCGGGTGGTGCCTGGCCACACTCT  438

seq1  TGCCGCTATTCCCACTGCCTCTCAGGCGCTACCAGGTCAGCGTCTCACTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCTATTCCCACTGCCTCTCAGGCGCTACCAGGTCAGCGTCTCACTG  488

seq1  TCCCTGAGGCATCAAATCATGGTTGCTCAAGGTCTCACCATTGAAGCCGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGGCATCAAATCATGGTTGCTCAAGGTCTCACCATTGAAGCCGA  538

seq1  TCACAGCCTGAAGCTCCAGTTCTGCTACATCCAGCTCGGGTAAAACTTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTGAAGCTCCAGTTCTGCTACATCCAGCTCGGGTAAAACTTGT  588

seq1  TCTTCCATCCTGGAGAGTTTCAGCTCATTGATTCTTCAACTCCAGGGTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATCCTGGAGAGTTTCAGCTCATTGATTCTTCAACTCCAGGGTGC  638

seq1  AGCGTCTCCTGGTCGTCATGGTAACTGGCGCACGCATGCGTGCTAGGTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCTCCTGGTCGTCATGGTAACTGGCGCACGCATGCGTGCTAGGTTC  688

seq1  ATGCAGGAGCAGAAACCCAGCCCACTGTGTTTGAGTTGATTTCCCCTCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAGCAGAAACCCAGCCCACTGTGTTTGAGTTGATTTCCCCTCTT  738

seq1  GCAAATGTTGGGAGGACTTCCTTAGTATGTATTTTATCCATTCTGGAAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTTGGGAGGACTTCCTTAGTATGTATTTTATCCATTCTGGAAAT  788

seq1  GTAGGTGGTAGGTTGACGCTAAGTGCACAAGGTAAATTTCCTCCTCTCCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGTAGGTTGACGCTAAGTGCACAAGGTAAATTTCCTCCTCTCCC  838

seq1  GTGTACAGGTCTGTGACTTTTTAAAAACTATACAATTAAGCCCCTCGTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAGGTCTGTGACTTTTTAAAAACTATACAATTAAGCCCCTCGTGA  888

seq1  TGATTATTAAAAATAATTGAACACAGAATAATTGAGCACAGAGAATTGCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTAAAAATAATTGAACACAGAATAATTGAGCACAGAGAATTGCC  938

seq1  TATGATGAATAGGTTGCTATAAAAAACATGGCATTGATACTTCTTTTTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAATAGGTTGCTATAAAAAACATGGCATTGATACTTCTTTTTAA  988

seq1  AAGAAAAATTTAAAAAAATCACTAAAAACGTTTTAGTACAGTATGCAACT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATTTAAAAAAATCACTAAAAACGTTTTAGTACAGTATGCAACT  1038

seq1  ATTTTTATGTATGTATGTATGTATGTATGTATTCATGCATGTATGGTACA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATGTATGTATGTATGTATGTATGTATTCATGCATGTATGGTACA  1088

seq1  TATGTTGCCTGTATGTATATTTCCTGCCTCAGCCATCCAAGTGCTGGAAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGCCTGTATGTATATTTCCTGCCTCAGCCATCCAAGTGCTGGAAT  1138

seq1  TC  1147
      ||
seq2  TC  1140

seq1: chr11_67585839_67585990
seq2: B6Ng01-190P21.g_71_222

seq1  AAACCTTAATGATAAAAAGATCAGTCTGGAAATGGCTCCCAGATGGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTAATGATAAAAAGATCAGTCTGGAAATGGCTCCCAGATGGGCTT  50

seq1  TTATGGTGGTGTGATTTCTACAGTCAATATGGTCATCTCTTTGGGACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTGGTGTGATTTCTACAGTCAATATGGTCATCTCTTTGGGACCAC  100

seq1  AGAGAATGGGAGGAAGTGGAGGGAGGGAAGAAAACATGTGTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGGGAGGAAGTGGAGGGAGGGAAGAAAACATGTGTGTGTGTGTG  150

seq1  TG  152
      ||
seq2  TG  152