MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-191L15
Chromosome	11 (Build37)
Map Location	28,463,136 - 28,636,290
singlet/doublet	doublet
Overlap gene	Ccdc85a
Upstream gene	LOC100042377, EG626571
Downstream gene	Efemp1, LOC382504, Pnpt1, A630052C17Rik, Smek2, LOC100042972, Ccdc104, LOC672637, LOC100042985, A430106J12Rik, 2010316F05Rik, LOC100042990, Mtif2, Rps27a, 1700034F02Rik, LOC628830, LOC666403, Rtn4
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG626571 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626571 MGI:3704119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 2 Proteins

name	Ccdc85a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216613 MGI:2445069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Efemp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216616 MGI:1339998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382504
definition	note : laminin receptor 1 pseudogene pseudo : _no_value

name	Pnpt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71701 MGI:1918951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630052C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320757 MGI:2444673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 20 ESTs

name	Smek2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104570 MGI:2144474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Ccdc104 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216618 MGI:1913994
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672637 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100042985 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	A430106J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108686 MGI:1925177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010316F05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67939 MGI:1915189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042990 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Mtif2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76784 MGI:1924034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps27a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78294 MGI:1925544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1700034F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73324 MGI:1920574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 4 Proteins

name	LOC628830 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 5 Proteins pseudo : _no_value

name	LOC666403 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 120 ESTs, 8 Proteins pseudo : _no_value

name	Rtn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68585 MGI:1915835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	EG626571 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261686 GeneID:626571 MGI:3704119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 2 Proteins product : predicted gene, EG626571, transcript variant 1 transcript_id : XM_484000.4

name	EG626571 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389922 GeneID:626571 MGI:3704119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG626571, transcript variant 2 transcript_id : XM_901734.2

name	Ccdc85a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801107 GeneID:216613 MGI:2445069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 85A transcript_id : NM_181577.3

name	Efemp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122482 GeneID:216616 MGI:1339998
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor-containing fibulin-like extracellular matrix protein 1 transcript_id : NM_146015.1

name	Pnpt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:25188203 GeneID:71701 MGI:1918951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyribonucleotide nucleotidyltransferase 1 transcript_id : NM_027869.1

name	Smek2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527251 GeneID:104570 MGI:2144474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SMEK homolog 2, suppressor of mek1 (Dictyostelium) transcript_id : NM_134034.1

name	LOC100042972 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261688 GeneID:100042972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100042972 transcript_id : XM_001479721.1

name	Ccdc104 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802234 GeneID:216618 MGI:1913994
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 104 transcript_id : NM_025740.2

name	LOC100042985 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261690 GeneID:100042985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100042985 transcript_id : XM_001479743.1

name	A430106J12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63025207 GeneID:108686 MGI:1925177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A430106J12 gene transcript_id : NM_176841.3

name	2010316F05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353003 GeneID:67939 MGI:1915189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010316F05 gene transcript_id : NM_026465.2

name	LOC100042990 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261692 GeneID:100042990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100042990 transcript_id : XM_001479750.1

name	Mtif2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625865 GeneID:76784 MGI:1924034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial translational initiation factor 2 transcript_id : NM_133767.2

name	Rps27a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76443692 GeneID:78294 MGI:1925544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S27a transcript_id : NM_024277.2

name	Rps27a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76443693 GeneID:78294 MGI:1925544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S27a transcript_id : NM_001033865.1

name	1700034F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389925 GeneID:73324 MGI:1920574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins product : RIKEN cDNA 1700034F02 gene, transcript variant 1 transcript_id : XM_125968.3

name	1700034F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389926 GeneID:73324 MGI:1920574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : RIKEN cDNA 1700034F02 gene, transcript variant 3 transcript_id : XM_901828.2

name	Rtn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802887 GeneID:68585 MGI:1915835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulon 4 transcript_id : NM_194054.2

name	Rtn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368929 GeneID:68585 MGI:1915835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulon 4 transcript_id : NM_194053.2

name	Rtn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377618 GeneID:68585 MGI:1915835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulon 4 transcript_id : NM_194052.2

name	Rtn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351890 GeneID:68585 MGI:1915835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulon 4 transcript_id : NM_194051.2

name	Rtn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374254 GeneID:68585 MGI:1915835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reticulon 4 transcript_id : NM_024226.3

name	EG626571 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933760 GeneID:626571 MGI:3704119
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_906827.1

name	EG626571 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51766327 GeneID:626571 MGI:3704119
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_484000.1

name	Ccdc85a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712026 CCDS:CCDS24489.1 GeneID:216613 MGI:2445069
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 85A protein_id : NP_853555.1

name	Efemp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122483 GeneID:216616 MGI:1339998
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : epidermal growth factor-containing fibulin-like extracellular matrix protein 1 protein_id : NP_666127.1

name	Pnpt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25188204 CCDS:CCDS24490.1 GeneID:71701 MGI:1918951
definition	EC_number : 2.7.7.8 GO_function : GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006402 - mRNA catabolism [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 function : exoribonuclease note : polynucleotide phosphorylase; 3'-5' RNA exonuclease product : polyribonucleotide nucleotidyltransferase 1 protein_id : NP_082145.1

name	Smek2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527252 CCDS:CCDS24492.1 GeneID:104570 MGI:2144474
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SMEK homolog 2, suppressor of mek1 protein_id : NP_598795.1

name	LOC100042972 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261689 GeneID:100042972
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479771.1

name	Ccdc104 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30352008 CCDS:CCDS24493.1 GeneID:216618 MGI:1913994
definition	codon_start : 1 product : coiled-coil domain containing 104 protein_id : NP_080016.1

name	LOC100042985 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261691 GeneID:100042985
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479793.1

name	A430106J12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63025208 CCDS:CCDS24494.1 GeneID:108686 MGI:1925177
definition	codon_start : 1 note : Akt-phosphorylation enhancer product : Hook-related protein 1 protein_id : NP_789811.2

name	2010316F05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312706 CCDS:CCDS24495.1 GeneID:67939 MGI:1915189
definition	codon_start : 1 product : hypothetical protein LOC67939 protein_id : NP_080741.1

name	LOC100042990 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261693 GeneID:100042990
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479800.1

name	Mtif2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625866 CCDS:CCDS24496.1 GeneID:76784 MGI:1924034
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 product : mitochondrial translational initiation factor 2 protein_id : NP_598528.2

name	Rps27a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76443694 CCDS:CCDS24497.1 GeneID:78294 MGI:1925544
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ribosomal protein S27a protein_id : NP_001029037.1

name	Rps27a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195690 CCDS:CCDS24497.1 GeneID:78294 MGI:1925544
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ribosomal protein S27a protein_id : NP_077239.1

name	1700034F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20857107 GeneID:73324 MGI:1920574
definition	codon_start : 1 product : hypothetical protein LOC73324 isoform 1 protein_id : XP_125968.1

name	1700034F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933767 GeneID:73324 MGI:1920574
definition	codon_start : 1 product : hypothetical protein LOC73324 isoform 3 protein_id : XP_906921.1

name	Rtn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34610235 CCDS:CCDS24501.1 GeneID:68585 MGI:1915835
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0019987 - negative regulation of anti-apoptosis [Evidence ISS]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence ISS] codon_start : 1 note : isoform A is encoded by transcript variant 1 product : reticulon 4 isoform A protein_id : NP_918943.1

name	Rtn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34610241 CCDS:CCDS24500.1 GeneID:68585 MGI:1915835
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0019987 - negative regulation of anti-apoptosis [Evidence ISS]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence ISS] codon_start : 1 note : isoform B2 is encoded by transcript variant 3 product : reticulon 4 isoform B2 protein_id : NP_918942.1

name	Rtn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34610233 CCDS:CCDS24499.1 GeneID:68585 MGI:1915835
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0019987 - negative regulation of anti-apoptosis [Evidence ISS]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence ISS] codon_start : 1 note : isoform B1 is encoded by transcript variant 2 product : reticulon 4 isoform B1 protein_id : NP_918941.1

name	Rtn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34610237 CCDS:CCDS24502.1 GeneID:68585 MGI:1915835
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0019987 - negative regulation of anti-apoptosis [Evidence ISS]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence ISS] codon_start : 1 note : isoform D is encoded by transcript variant 5 product : reticulon 4 isoform D protein_id : NP_918940.1

name	Rtn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195648 CCDS:CCDS24503.1 GeneID:68585 MGI:1915835
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0019987 - negative regulation of anti-apoptosis [Evidence ISS]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence ISS] codon_start : 1 note : isoform C is encoded by transcript variant 4 product : reticulon 4 isoform C protein_id : NP_077188.1

name	LOC100042377 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042377
definition	number : 1 pseudo : _no_value

name	LOC672637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672637
definition	number : 5 pseudo : _no_value

name	LOC672637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672637
definition	number : 4 pseudo : _no_value

name	LOC672637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672637
definition	number : 3 pseudo : _no_value

name	LOC672637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672637
definition	number : 2 pseudo : _no_value

name	LOC672637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672637
definition	number : 1 pseudo : _no_value

name	A630052C17Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261687 GeneID:320757 MGI:2444673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 20 ESTs product : RIKEN cDNA A630052C17 gene transcript_id : XR_035410.1

name	LOC628830 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261652 GeneID:628830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 5 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_033571.1

name	LOC666403 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261694 GeneID:666403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 120 ESTs, 8 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034389.1

clone name	MSMg01-521E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-425L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449J04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-516F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-191L15.b	B6Ng01-191L15.g
ACC	GA015147	GA015148
length	1,104	1,161
definition	B6Ng01-191L15.b	B6Ng01-191L15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(28,635,183 - 28,636,290)	(28,463,136 - 28,464,286)
sequence	gaattcaacatttctttcttgccaggcaagtaattcagtttttgagacag tctttagttctccttcacctttgaaagtatagttctgtaagccacacaat tctagataggagtgtcttttttttttttatcaacaatttctatatttcat accagcaacttctcacttggatagcttctgtctgttgttatttttggtcg tctgtaggggaggtgtgacctcactgtgacttgggtctcccaggagcttt gaactcttgcattcacacaccctggtgccctggctgttggaatttgtgct ttataacccagccgggtaggtaaaggaagttcagaacccaggaaatttct gttcggtaggttatgagtctctggtcatcctttcttttttttttcccagt ttgctgcgatctcagacctcagatggatcaaagaattgttgatatttcta tttgctcagcgtttttatttgtgagggcagagtgatggctgccaaattaa aatgccagtgctgttatggaagcttaggcattcctaccaatttttggaac aactatggtgcttggatagcttttggtgcttcctggcttttaaattctta tttaaaagaaaacaggtatttataaatctataacgatataaatctgataa aagtgggcttttcctagggcttttaactatcaattttctctccttattga tggccccaacttgaatctatagagtcttttattgtcagctacactggtct tttctacatggagaatcggcagtgatttctaacatctttttcagggtggt atgaaaaacctcttgttatctgaaaagtgaggaacagctctcttagtgga caatcaagggaaaggaagaacaactcccaacccagcagggcttcagatat ttgccctgtagttgacactgggtaggaggattatgcaactgaaattctgg aagaaacctgtttgctgagcaaaagacctatttaattgtctcctttaaat gattctgccacaggcagtgtatttcgttaacccgcctagggattgttttt aaagtgagattgccctgttgatgaacaaatatgagaaaataacttccagg cggg	gaattcacagcaacaactcatgtggctgggtgccagagacattttaatat ttgcttgactaaacaatcagctcagtgtttggcattcttcagatacaata tttaagttatcaaaatgtacataaatacatacacataagaaaacacaaat aatcttcctacagaaaagatggccacctagattaaagagcatacatggct ttgtggattcattttcaggggaggtgagaaccaatcacagcaaaactgat tcatttctaaaccttccaggtcttccaatggcctcacctctaagatttta agactaacaaagaataaatactttgttattatcacaaataaaacttcttc aataattttcttaccaaatcatgctaagatattaagaaaaaagtactttg tgtttcattaactatttaacactgcacaacatacaagatatgaaattcag tactaacatttcaaaactaaagatctttcaagagaacttcaatttctact gtctggatacatggataagcagtgttctggcttttacttttaaagcaaaa caacagatttataagagtgatcatctctgctatggtacaccattgtaaac cttgctctggagaaatcctgcagagtttctcctacaagggttatcttact ctcacagatgaatctactcttgccatttaggcaattagaagtagtataac aactaaacactttgtaggcttgaaatgcagcattgtcttgtgggaaatac tcaatattgtagggcttgcactactgtgaacaaattagaaagctatattc catttccctgctggatgcacaacctttaaatgctaaagcagtcctccacc attcacatgacaacctctccctgaattgtcaaacaattccacaggacaaa aaaaaaattggattttttttttttctgcaaagcagttgaacattcagaca gcctttgacttagagatgagaggagttaaagactcaccagtcctgtggtt ctaattttttagtcctgatacctcatggagttagttaaaagaagaagaaa tacttttcttctttcaccaagaatacttgtgtttgaagcattcaccgaaa gcacagctcgttatacattgggagttgctttccatggcctgatcattcat gtccactagtg
quality values	Open. Hide. 62 47 18 38 62 37 15 33 32 24 62 62 62 47 62 62 62 62 62 62 47 62 44 21 62 62 44 62 59 62 62 16 18 27 24 36 11 13 36 32 27 25 25 28 28 25 40 43 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 59 62 62 62 43 34 49 39 27 28 48 54 38 42 38 48 48 50 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 51 59 59 51 62 62 59 62 62 62 56 54 46 59 59 56 62 62 62 59 59 62 59 62 59 59 54 62 62 62 62 62 62 56 59 59 59 59 62 62 62 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 62 62 62 62 59 62 56 62 59 59 59 62 62 59 62 51 59 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 54 56 62 62 62 62 62 62 59 59 62 62 56 59 62 62 59 62 62 62 59 59 59 62 51 56 56 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 50 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 29 35 50 45 45 45 34 50 62 62 62 56 56 56 38 62 56 62 62 62 62 62 56 56 56 41 62 56 51 62 62 56 62 62 62 62 56 62 62 62 62 56 62 62 62 62 62 62 62 62 56 51 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 56 56 56 62 56 56 62 54 54 62 62 56 62 62 62 47 56 62 62 62 47 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 45 58 54 49 58 54 58 58 58 58 58 54 58 54 52 58 58 58 58 58 58 58 58 58 58 52 52 58 58 58 52 58 58 58 52 58 58 58 58 58 58 58 52 54 58 58 58 58 58 58 58 54 41 58 54 58 58 54 58 58 58 58 51 58 58 58 49 58 58 58 51 58 58 54 51 58 47 58 50 58 58 58 58 47 58 58 58 49 50 40 58 58 46 41 42 58 51 50 54 58 58 58 58 58 51 58 54 53 58 50 51 58 50 46 52 46 58 54 51 51 58 49 49 24 50 54 58 58 53 50 58 58 51 51 58 58 58 51 50 44 50 50 26 58 51 50 51 58 58 52 52 32 39 39 39 51 42 40 50 39 58 58 52 52 40 50 53 52 54 37 33 31 42 54 49 40 45 47 42 54 54 54 47 21 52 53 54 50 47 36 40 38 45 49 37 52 37 37 52 39 45 49 39 54 54 40 42 47 40 54 23 42 40 42 51 42 37 42 33 53 32 42 54 33 53 34 54 54 37 53 37 34 42 31 38 47 46 31 31 53 51 32 34 45 47 30 31 40 36 53 20 16 51 32 29 19 16 52 34 26 40 40 35 53 53 52 32 32 30 30 49 46 23 51 42 30 31 33 36 51 51 46 51 29 18 46 30 32 45 23 31 17 31 30 34 34 32 30 33 46 46 37 31 34 35 43 38 31 31 31 29 30 29 43 31 31 35 38 42 26 28 23 31 31 9 31 21 13 29 30 31 19 13 27 46 31 21 46 20 28 27 31 42 17 22 27 24 12 27 30 36 25 31 12 6 16 23 33 17 23 16 28 6 10 23 26 35 42 38 33 27 22 37 18 14 30 48 41 22 14 46 21 28 37 19 29 20 30 27 12 29 16 24 29 21 32 48 35 14 21 14 14 35 15 19 26 19 32 26 31 27 25 18 13 19 15 31 27 48 31 11 9 21 10 14 19 11 24 7 25 48 25 28 33 23 24 19 43 14 21 17 34 19 23 19 26 32 39 39 25 8 17 15 25 11 10 33 39 32 25 7 4 4 17 7 15 19 27 32 23 39 27 7 31 21 24 28 28 27 18 13 24 24 18 8 7 8 19 17 18 22 6 5 3 5 19 24 28 40 28 26 6 17 15 16 11 14 28 21 5 3 6 24 21 11 47 23 9 6 8 15 19 33 47 32 11 18 40 6 18 3 7 3 4 18 4 16 20 18 28 17 8 7 4 4 6 13 9 5 15 16 6 16 22 9 21 5 10 13 7 5 8 11 28 19 8 4 24 6 12 21 11 11 7 5 5 11 22 30 17	Open. Hide. 62 47 56 47 62 47 51 62 44 56 59 11 11 16 7 10 18 18 11 19 18 28 18 25 23 32 62 54 49 54 62 62 62 59 59 62 59 59 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 39 39 28 30 27 25 36 46 48 32 31 28 35 50 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 49 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 54 52 46 45 58 58 42 54 58 58 58 54 58 58 58 58 54 54 58 58 52 54 54 46 58 58 54 58 54 58 58 58 58 54 58 54 41 58 54 58 54 58 58 58 58 58 54 51 58 58 58 52 58 58 50 32 45 42 58 58 58 42 58 58 58 53 58 58 58 58 54 44 54 58 58 58 58 37 58 58 58 53 51 58 54 58 50 50 46 58 46 49 58 49 51 51 54 58 42 52 53 35 39 35 58 51 40 49 53 46 51 58 41 51 58 58 54 58 49 54 51 50 41 39 33 49 58 50 52 54 53 38 29 58 53 54 52 54 40 44 27 39 58 51 39 52 58 50 44 35 39 58 49 41 51 33 30 47 49 41 49 47 49 47 51 49 37 51 54 41 53 54 47 50 37 45 53 54 52 53 31 53 42 53 38 54 33 49 42 54 46 40 53 42 51 34 45 43 45 39 54 41 35 36 33 53 39 47 49 40 54 54 45 34 37 33 53 39 32 54 33 40 41 49 46 28 45 31 49 52 31 53 31 53 31 34 53 32 32 34 31 41 31 45 39 36 20 18 52 18 21 53 47 31 38 49 29 31 28 34 31 36 36 31 16 29 45 31 51 51 38 32 51 33 28 51 31 32 37 31 38 34 31 28 20 31 26 31 33 29 9 33 36 29 51 31 36 41 26 30 25 41 29 32 31 36 29 26 31 46 30 32 35 18 28 31 26 15 27 31 32 31 30 32 31 37 30 22 30 41 41 31 31 31 23 47 32 31 31 44 17 28 31 41 27 25 25 41 33 30 27 28 30 37 29 31 18 23 11 11 46 14 15 31 46 46 48 46 47 46 46 48 18 26 19 30 22 18 10 44 44 48 48 44 44 48 44 48 44 10 9 17 31 21 30 38 25 20 22 26 14 25 33 10 26 7 17 19 33 37 25 24 19 26 16 20 15 7 15 8 32 16 4 4 5 14 17 10 10 16 6 4 6 21 31 13 16 7 28 14 7 11 9 37 40 30 16 8 10 18 26 12 16 34 21 15 12 27 37 22 28 7 7 4 7 14 30 18 19 10 16 30 38 38 29 16 22 13 21 17 15 8 21 28 7 14 23 7 6 19 16 8 27 18 21 11 14 15 8 5 5 3 22 34 34 19 7 12 9 13 20 17 16 16 21 8 17 13 5 6 32 38 8 4 6 18 10 7 32 8 16 5 7 6 13 15 16 15 12 5 8 11 18 4 1 1 3 13 28 4 5 9 16 12 11 11 14 11 8 6 6 2 3 7 11 11 4 3 3 6 4 5 10 8 10 10 11 7 15 11 4 6 12 5 9 25 16 5 8 18 7 4 3 1 3 26 7 15 5 2 1 11 2 3 2 4 9 8 9 6 3 2 3 10 7 4 7 4 10 6 6 12 6 10 4 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_28635183_28636290
seq2: B6Ng01-191L15.b_45_1148 (reverse)

seq1  CCCG-CTGGAAGTTTATTTCTCATATTTGTTCATCACCAGGGCAATTCTC  49
      |||| |||||||||  |||||||||||||||||||| |||||||| ||| 
seq2  CCCGCCTGGAAGTTATTTTCTCATATTTGTTCATCAACAGGGCAA-TCT-  48

seq1  CACCTTTAAAACATCCCCTTAGGCCGGGTTAACGAAATACACCCTGCCTG  99
      ||| || ||||||  ||| |||| |||||||||||||||||  |||||||
seq2  CACTTTAAAAACAATCCC-TAGG-CGGGTTAACGAAATACA--CTGCCTG  94

seq1  T-GCAGAATCATTTAAAGGAGACAATTTAAATGGTCTTTTTGCTCAGCAA  148
      | ||||||||||||||||||||||||| ||  |||| |||||||||||||
seq2  TGGCAGAATCATTTAAAGGAGACAATTAAATAGGTC-TTTTGCTCAGCAA  143

seq1  ACAGGTTTCTTCCAG-ATTTCAGTTGCATAATCCTCCTACCCAGTGTCAA  197
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTCTTCCAGAATTTCAGTTGCATAATCCTCCTACCCAGTGTCAA  193

seq1  CTACAGGGCAAATATCTGAAGCCCCTGCTGGGTTGGGAGTTGTTCTTCC-  246
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  CTACAGGGCAAATATCTGAAG-CCCTGCTGGGTTGGGAGTTGTTCTTCCT  242

seq1  TTCCCTTGATTGTCCACTAAGAGAGCTGTTCCTCACTTTTCAGATAACAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGATTGTCCACTAAGAGAGCTGTTCCTCACTTTTCAGATAACAA  292

seq1  GAGGTTTTTCATACCACCCTGAAAAAGATGTTAGAAATCACTGCCGATTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTTTCATACCACCCTGAAAAAGATGTTAGAAATCACTGCCGATTC  342

seq1  TCCATGTAGAAAAGACCAGTGTAGCTGACAATAAAAGACTCTATAGATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTAGAAAAGACCAGTGTAGCTGACAATAAAAGACTCTATAGATTC  392

seq1  AAGTTGGGGCCATCAATAAGGAGAGAAAATTGATAGTTAAAAGCCCTAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGGGCCATCAATAAGGAGAGAAAATTGATAGTTAAAAGCCCTAGG  442

seq1  AAAAGCCCACTTTTATCAGATTTATATCGTTATAGATTTATAAATACCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCACTTTTATCAGATTTATATCGTTATAGATTTATAAATACCTG  492

seq1  TTTTCTTTTAAATAAGAATTTAAAAGCCAGGAAGCACCAAAAGCTATCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTAAATAAGAATTTAAAAGCCAGGAAGCACCAAAAGCTATCCA  542

seq1  AGCACCATAGTTGTTCCAAAAATTGGTAGGAATGCCTAAGCTTCCATAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATAGTTGTTCCAAAAATTGGTAGGAATGCCTAAGCTTCCATAAC  592

seq1  AGCACTGGCATTTTAATTTGGCAGCCATCACTCTGCCCTCACAAATAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGCATTTTAATTTGGCAGCCATCACTCTGCCCTCACAAATAAAA  642

seq1  ACGCTGAGCAAATAGAAATATCAACAATTCTTTGATCCATCTGAGGTCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGAGCAAATAGAAATATCAACAATTCTTTGATCCATCTGAGGTCTG  692

seq1  AGATCGCAGCAAACTGGGAAAAAAAAAAGAAAGGATGACCAGAGACTCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGCAGCAAACTGGGAAAAAAAAAAGAAAGGATGACCAGAGACTCAT  742

seq1  AACCTACCGAACAGAAATTTCCTGGGTTCTGAACTTCCTTTACCTACCCG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACCGAACAGAAATTTCCTGGGTTCTGAACTTCCTTTACCTACCCG  792

seq1  GCTGGGTTATAAAGCACAAATTCCAACAGCCAGGGCACCAGGGTGTGTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTATAAAGCACAAATTCCAACAGCCAGGGCACCAGGGTGTGTGA  842

seq1  ATGCAAGAGTTCAAAGCTCCTGGGAGACCCAAGTCACAGTGAGGTCACAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGAGTTCAAAGCTCCTGGGAGACCCAAGTCACAGTGAGGTCACAC  892

seq1  CTCCCCTACAGACGACCAAAAATAACAACAGACAGAAGCTATCCAAGTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACAGACGACCAAAAATAACAACAGACAGAAGCTATCCAAGTGA  942

seq1  GAAGTTGCTGGTATGAAATATAGAAATTGTTGATAAAAAAAAAAAAGACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGCTGGTATGAAATATAGAAATTGTTGATAAAAAAAAAAAAGACA  992

seq1  CTCCTATCTAGAATTGTGTGGCTTACAGAACTATACTTTCAAAGGTGAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATCTAGAATTGTGTGGCTTACAGAACTATACTTTCAAAGGTGAAG  1042

seq1  GAGAACTAAAGACTGTCTCAAAAACTGAATTACTTGCCTGGCAAGAAAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTAAAGACTGTCTCAAAAACTGAATTACTTGCCTGGCAAGAAAGA  1092

seq1  AATGTTGAATTC  1108
      ||||||||||||
seq2  AATGTTGAATTC  1104

seq1: chr11_28463136_28464286
seq2: B6Ng01-191L15.g_69_1229

seq1  GAATTCACAGCAACAACTCATGTGGCTGGGTGCCAGAGACATTTTAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAACAACTCATGTGGCTGGGTGCCAGAGACATTTTAATAT  50

seq1  TTGCTTGACTAAACAATCAGCTCAGTGTTTGGCATTCTTCAGATACAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGACTAAACAATCAGCTCAGTGTTTGGCATTCTTCAGATACAATA  100

seq1  TTTAAGTTATCAAAATGTACATAAATACATACACATAAGAAAACACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTATCAAAATGTACATAAATACATACACATAAGAAAACACAAAT  150

seq1  AATCTTCCTACAGAAAAGATGGCCACCTAGATTAAAGAGCATACATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCTACAGAAAAGATGGCCACCTAGATTAAAGAGCATACATGGCT  200

seq1  TTGTGGATTCATTTTCAGGGGAGGTGAGAACCAATCACAGCAAAACTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGATTCATTTTCAGGGGAGGTGAGAACCAATCACAGCAAAACTGAT  250

seq1  TCATTTCTAAACCTTCCAGGTCTTCCAATGGCCTCACCTCTAAGATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTAAACCTTCCAGGTCTTCCAATGGCCTCACCTCTAAGATTTTA  300

seq1  AGACTAACAAAGAATAAATACTTTGTTATTATCACAAATAAAACTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAACAAAGAATAAATACTTTGTTATTATCACAAATAAAACTTCTTC  350

seq1  AATAATTTTCTTACCAAATCATGCTAAGATATTAAGAAAAAAGTACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTTCTTACCAAATCATGCTAAGATATTAAGAAAAAAGTACTTTG  400

seq1  TGTTTCATTAACTATTTAACACTGCACAACATACAAGATATGAAATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATTAACTATTTAACACTGCACAACATACAAGATATGAAATTCAG  450

seq1  TACTAACATTTCAAAACTAAAGATCTTTCAAGAGAACTTCAATTTCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACATTTCAAAACTAAAGATCTTTCAAGAGAACTTCAATTTCTACT  500

seq1  GTCTGGATACATGGATAAGCAGTGTTCTGGCTTTTACTTTTAAAGCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATACATGGATAAGCAGTGTTCTGGCTTTTACTTTTAAAGCAAAA  550

seq1  CAACAGATTTATAAGAGTGATCATCTCTGCTATGGTACACCATTGTAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATTTATAAGAGTGATCATCTCTGCTATGGTACACCATTGTAAAC  600

seq1  CTTGCTCTGGAGAAATCCTGCAGAGTTTCTCCTACAAGGGTTATCTTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTGGAGAAATCCTGCAGAGTTTCTCCTACAAGGGTTATCTTACT  650

seq1  CTCACAGATGAATCTACTCTTGCCATTTAGGCAATTAGAAGTAGTATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGATGAATCTACTCTTGCCATTTAGGCAATTAGAAGTAGTATAAC  700

seq1  AACTAAACACTTTGTAGGCTTGAAATGCAGCATTGTCTTGTGGGAAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACACTTTGTAGGCTTGAAATGCAGCATTGTCTTGTGGGAAATAC  750

seq1  TCAATATTGTAGGGCTTGCACTACTGTGAACAAATTAGAAAGCTATATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTGTAGGGCTTGCACTACTGTGAACAAATTAGAAAGCTATATTC  800

seq1  CATTTCCCTGCTGGATGCACAACCTTTAAATGCTAAAGCAGTCCTCCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTGCTGGATGCACAACCTTTAAATGCTAAAGCAGTCCTCCACC  850

seq1  ATTCACATGACAACCTCTCCCTGAATTGTCAAACAATTCCACAGGACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATGACAACCTCTCCCTGAATTGTCAAACAATTCCACAGGACAAA  900

seq1  AAAAAAATTGGA--TTTTTTTTTTCTGCAAAGCAGTTGAACATTCAGACA  948
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTGGATTTTTTTTTTTTCTGCAAAGCAGTTGAACATTCAGACA  950

seq1  GCC-TTGACTTAGAGATGAGAGGAG-TAAAGACTCACCAGTCCTGT-GTT  995
      ||| ||||||||||||||||||||| |||||||||||||||||||| |||
seq2  GCCTTTGACTTAGAGATGAGAGGAGTTAAAGACTCACCAGTCCTGTGGTT  1000

seq1  CTA--TTTTTAGTCCTGATA-CTCATGGAGTTAGTTAAAAAGAAGAAGAA  1042
      |||  ||||||||||||||| ||||||||||||||| |||||||||||||
seq2  CTAATTTTTTAGTCCTGATACCTCATGGAGTTAGTT-AAAAGAAGAAGAA  1049

seq1  ATAACTTTCTTC-TTCA-CAAG-ATACTTAGTGTTTGAAGCATTCACAGA  1089
      |||  ||||||| |||| |||| |||||| ||||||||||||||||| ||
seq2  ATACTTTTCTTCTTTCACCAAGAATACTT-GTGTTTGAAGCATTCACCGA  1098

seq1  AAGCCACAGCTCGTTATACAT--GGAGTGGTTTTCCCCTGGCCTGATCAT  1137
      ||| |||||||||||||||||  ||||| | ||| || ||||||||||||
seq2  AAG-CACAGCTCGTTATACATTGGGAGTTGCTTT-CCATGGCCTGATCAT  1146

seq1  TCATG-CCACTAGTG  1151
      ||||| |||||||||
seq2  TCATGTCCACTAGTG  1161

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information