BAC Information

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BAC

Clone NameB6Ng01-191N17
Chromosome11 (Build37)
Map Location 104,935,129 - 105,091,662
singlet/doubletdoublet
Overlap gene4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik
Upstream geneCrhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125
Downstream geneMrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N17.bB6Ng01-191N17.g
ACCGA015247GA015248
length915972
definitionB6Ng01-191N17.b B6Ng01-191N17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,935,129 - 104,936,041)(105,090,696 - 105,091,662)
sequence
gaattctttaaatgtttgtgtattaactacttagtttttaaatccatata
ttgatttttattttattacttaaaaattattcggaaacttttttaattct
gtcttctttagtagtttattgtttcacattttgatttaaagtcacgtgaa
gttcatatctgtgtattacaatgtgagataagggtctaattacatgatag
tatccaagtttctcaaatcatttattgaagaaagtagtcttttctgtatt
gtacattctgcaactgttactgaaaatgtattgaccacaaatgagtacat
agtttcccagtaacactgcattattttatgcctttttttgtattggtatt
acaatgatgtgttatttttatgattaaaatattatgtgtatttaaaaaaa
aaaagaacatgggcctgctaaaaagaagaagaagaagaaaaagaaaaaga
aaaagaaaaagaaaaagaaaaggaaaaagaaagagaaaaagaaaaagaaa
aagaaaaagaaaaagaaaaaggaaagccacacactcacacacacatggaa
tgggtgaatcagagggggctccaaccaacctttctttttgctctcaggat
tttataccttctcagacaaaagttctctatgtaagaaaaaaaaaatatta
cctcatagttaaaatgttacacaagagggagctacagcaggataattagg
ataattgattacatggctttctaagcactttttgattccataagttccaa
gcaatagtttatgtcataggtcaattaaaggtttaaggagttacagcaga
attgattacatgtctctccattaagattcccatctaactaaatattccct
atctattttttttttttagctccacattataagtttaaagcaataggttg
tttttggggtttttt
gaattcaaggttagccttggctatatagtaagtttaaggctaacatggaa
tacccaagactgttttaaaaccttcaccctcaaaagtgcaaaggctttaa
ctaacaacaaagctggtagtacttaaacaaagtagtcagtctgaatgcca
cttggtaagaaaagaaaaagcagcaagggatgggggcaggaacaagccaa
gcagggccattttaaggacttgtgagacagaggcggcacatatgaactgg
ggttcagtagtattgggtgctactgaggaaactaaaagaacaaatagagg
ggcaaggagtccagttaggctgaaatctcaacagggggataaaaatttca
gctacagtggcaatagtgaatagaattaagtggaggaattcagggcattt
tctgaagctaagatcattaatatttactgctcctgactgtagggttaaat
tcgaagagataagaataaatgtttttaaggcagaaatagatgaagagcag
acaatactcagatatgtaaaactgcagaagtgggtggtgagtggggaatt
agaatgccaaaacactttgaaagctgatacacttggacagaaaaagaagg
tgccactgactggaggcgactggctatacaggtctggaactcagggcaga
gagatctgactacagagagaatcttgaaagtcttttgtacacaggtgaca
gggtttaatgtcaaactaggtgagattaagtggaaaatggaggtagataa
aagaatctttagcctgagttctacaacatcccagtgtgtagagacagaag
cgaggaagcacggtaatagaggccaaggtgagagtgtgtgctggctaaca
aactgtgctggataagctctgacccactgatctcctaggtttagcaatgt
ggaagccatacactttaaacacagtgaaggaagaacggctttcagactct
tttttggtttgtttttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104935129_104936041
seq2: B6Ng01-191N17.b_47_961

seq1  GAATTCTTTAAATGTTTGTGTATTAACTACTTAGTTTTTAAATCCATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAATGTTTGTGTATTAACTACTTAGTTTTTAAATCCATATA  50

seq1  TTGATTTTTATTTTATTACTTAAAAATTATTCGGAAACTTTTTTAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTATTTTATTACTTAAAAATTATTCGGAAACTTTTTTAATTCT  100

seq1  GTCTTCTTTAGTAGTTTATTGTTTCACATTTTGATTTAAAGTCACGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTAGTAGTTTATTGTTTCACATTTTGATTTAAAGTCACGTGAA  150

seq1  GTTCATATCTGTGTATTACAATGTGAGATAAGGGTCTAATTACATGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATATCTGTGTATTACAATGTGAGATAAGGGTCTAATTACATGATAG  200

seq1  TATCCAAGTTTCTCAAATCATTTATTGAAGAAAGTAGTCTTTTCTGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAGTTTCTCAAATCATTTATTGAAGAAAGTAGTCTTTTCTGTATT  250

seq1  GTACATTCTGCAACTGTTACTGAAAATGTATTGACCACAAATGAGTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCTGCAACTGTTACTGAAAATGTATTGACCACAAATGAGTACAT  300

seq1  AGTTTCCCAGTAACACTGCATTATTTTATGCCTTTTTTTGTATTGGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCAGTAACACTGCATTATTTTATGCCTTTTTTTGTATTGGTATT  350

seq1  ACAATGATGTGTTATTTTTATGATTAAAATATTATGTGTATTTAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATGTGTTATTTTTATGATTAAAATATTATGTGTATTTAAAAAAA  400

seq1  AAAAGAACATGGGCCTGCTAAAAAGAAGAAGAAGAAGAAAAAGAAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACATGGGCCTGCTAAAAAGAAGAAGAAGAAGAAAAAGAAAAAGA  450

seq1  AAAAGAAAAAGAAAAAGAAAAGGAAAAAGAAAGAGAAAAAGAAAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAGAAAAAGAAAAGGAAAAAGAAAGAGAAAAAGAAAAAGAAA  500

seq1  AAGAAAAAGAAAAAGAAAAAGGAAAGCCACACACTCACACACACATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGAAAAAGAAAAAGGAAAGCCACACACTCACACACACATGGAA  550

seq1  TGGGTGAATCAGAGGGGGCTCCAACCAACCTTTCTTTTTGCTCTCAGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAATCAGAGGGGGCTCCAACCAACCTTTCTTTTTGCTCTCAGGAT  600

seq1  TTTATACCTTCTCAGACAAAAGTTCTCTATGTAAGAAAAAAAAAATATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACCTTCTCAGACAAAAGTTCTCTATGTAAGAAAAAAAAAATATTA  650

seq1  CCTCATAGTTAAAATGTTACACAAGAGGGAGCTACAGCAGGATAATTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAGTTAAAATGTTACACAAGAGGGAGCTACAGCAGGATAATTAGG  700

seq1  ATAATTGATTACATGGCTTTCTAAGCACTTTTTGATTCCATAAGTTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGATTACATGGCTTTCTAAGCACTTTTTGATTCCATAAGTTCCAA  750

seq1  GCAATAGTTTATGTCATAGGTCAATT-AAGGTTTAAGGAGTTACAGCAGA  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAATAGTTTATGTCATAGGTCAATTAAAGGTTTAAGGAGTTACAGCAGA  800

seq1  ATTGATTACATGTCTCTCCATTAAGATTCCCATCTAACTAAATATTCCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTACATGTCTCTCCATTAAGATTCCCATCTAACTAAATATTCCCT  850

seq1  ATCTA-TTTTTTTTTTTAGCTCCACATTATAAGTTTAAAGCAATAGGTTG  898
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTTTTTTTTTAGCTCCACATTATAAGTTTAAAGCAATAGGTTG  900

seq1  TTTTTGGGGTTTTTT  913
      |||||||||||||||
seq2  TTTTTGGGGTTTTTT  915

seq1: chr11_105090696_105091662
seq2: B6Ng01-191N17.g_69_1040 (reverse)

seq1  AAAC-AAAAAACAAACAAAAAAGAAGTCTGAAAGCCGTT-TTCCTTCACT  48
      |||| ||||||||||| |||||  ||||||||||||||| ||||||||||
seq2  AAACAAAAAAACAAACCAAAAAAGAGTCTGAAAGCCGTTCTTCCTTCACT  50

seq1  GTGTTT-AAGTGTATGGCTTCCACATTGCTAAACCTA-GAGATCAGT-GG  95
      |||||| |||||||||||||||||||||||||||||| ||||||||| ||
seq2  GTGTTTAAAGTGTATGGCTTCCACATTGCTAAACCTAGGAGATCAGTGGG  100

seq1  TCAGAGCTTATCCAGCACAGTTTGTTAGCCAGCACACACTCTCACCTTGG  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTTATCCAGCACAGTTTGTTAGCCAGCACACACTCTCACCTTGG  150

seq1  CCTCTATTACCGTGCTTCCTCGCTTCTGTCTCTACACACTGGGATGTTGT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATTACCGTGCTTCCTCGCTTCTGTCTCTACACACTGGGATGTTGT  200

seq1  AGAACTCAGGCTAAAGATTCTTTTATCTACCTCCATTTTCCACTTAATCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGGCTAAAGATTCTTTTATCTACCTCCATTTTCCACTTAATCT  250

seq1  CACCTAGTTTGACATTAAACCCTGTCACCTGTGTACAAAAGACTTTCAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGTTTGACATTAAACCCTGTCACCTGTGTACAAAAGACTTTCAAG  300

seq1  ATTCTCTCTGTAGTCAGATCTCTCTGCCCTGAGTTCCAGACCTGTATAGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTGTAGTCAGATCTCTCTGCCCTGAGTTCCAGACCTGTATAGC  350

seq1  CAGTCGCCTCCAGTCAGTGGCACCTTCTTTTTCTGTCCAAGTGTATCAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGCCTCCAGTCAGTGGCACCTTCTTTTTCTGTCCAAGTGTATCAGC  400

seq1  TTTCAAAGTGTTTTGGCATTCTAATTCCCCACTCACCACCCACTTCTGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTGTTTTGGCATTCTAATTCCCCACTCACCACCCACTTCTGCA  450

seq1  GTTTTACATATCTGAGTATTGTCTGCTCTTCATCTATTTCTGCCTTAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACATATCTGAGTATTGTCTGCTCTTCATCTATTTCTGCCTTAAAA  500

seq1  ACATTTATTCTTATCTCTTCGAATTTAACCCTACAGTCAGGAGCAGTAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTCTTATCTCTTCGAATTTAACCCTACAGTCAGGAGCAGTAAA  550

seq1  TATTAATGATCTTAGCTTCAGAAAATGCCCTGAATTCCTCCACTTAATTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGATCTTAGCTTCAGAAAATGCCCTGAATTCCTCCACTTAATTC  600

seq1  TATTCACTATTGCCACTGTAGCTGAAATTTTTATCCCCCTGTTGAGATTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTATTGCCACTGTAGCTGAAATTTTTATCCCCCTGTTGAGATTT  650

seq1  CAGCCTAACTGGACTCCTTGCCCCTCTATTTGTTCTTTTAGTTTCCTCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAACTGGACTCCTTGCCCCTCTATTTGTTCTTTTAGTTTCCTCAG  700

seq1  TAGCACCCAATACTACTGAACCCCAGTTCATATGTGCCGCCTCTGTCTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCCAATACTACTGAACCCCAGTTCATATGTGCCGCCTCTGTCTCA  750

seq1  CAAGTCCTTAAAATGGCCCTGCTTGGCTTGTTCCTGCCCCCATCCCTTGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTTAAAATGGCCCTGCTTGGCTTGTTCCTGCCCCCATCCCTTGC  800

seq1  TGCTTTTTCTTTTCTTACCAAGTGGCATTCAGACTGACTACTTTGTTTAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTCTTTTCTTACCAAGTGGCATTCAGACTGACTACTTTGTTTAA  850

seq1  GTACTACCAGCTTTGTTGTTAGTTAAAGCCTTTGCACTTTTGAGGGTGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCAGCTTTGTTGTTAGTTAAAGCCTTTGCACTTTTGAGGGTGAA  900

seq1  GGTTTTAAAACAGTCTTGGGTATTCCATGTTAGCCTTAAACTTACTATAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAAAACAGTCTTGGGTATTCCATGTTAGCCTTAAACTTACTATAT  950

seq1  AGCCAAGGCTAACCTTGAATTC  967
      ||||||||||||||||||||||
seq2  AGCCAAGGCTAACCTTGAATTC  972