BAC Information

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BAC

Clone NameB6Ng01-193P04
Chromosome11 (Build37)
Map Location 44,280,840 - 44,419,436
singlet/doubletdoublet
Overlap gene3732413I11Rik
Upstream geneC1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b, Il12b, Ublcp1
Downstream geneEbf1, LOC382510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193P04.bB6Ng01-193P04.g
ACCGA016771GA016772
length589927
definitionB6Ng01-193P04.b B6Ng01-193P04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,280,840 - 44,281,434)(44,418,826 - 44,419,436)
sequence
attagcactgaaccctgagcaaactatctgggcttagactctagatttcc
catttactatgtatttcccttagcatatgcctttcctatctgtaaaacaa
aggaatgctatttgtatcttagggttcttatgaagagtaaatcggttaac
atttctaactcacatagtgcctggtaaactctttgtacttcttaaaataa
ctctaaagctgaacgtttattatgttttaggcagtcccagattatacacc
actatgtgttttatgttttatgaactgaccagatgtatgaagatcatctc
atgtaattaaagtgtctgataagaatatccctctttgccattacgaaaac
agctacatctgcaatagtgtctgggtgtggtggttgtttatgggatggat
ccccaggtagggaagtctctggatagtcatttcttccgtctctgcttcga
actttgtctctgtaactccttccataggcattttgttccccagctgacag
gagcctgatatacctgtctcctgagagactctgccagtgcctgactaata
tagaagtggttgctcacagccatccattggaaagagcac

tgcagccttcttctttactgactacacagcatccaatgggagatgagagt
gcgctcaggtcacttcttccaaaagcagaggtggacacatcagtttgcct
tctgctgtgaggagctcctgatcgccaacagtacgcagtgggtggaaggt
cagcaaatgctgaacccactgagaacccggacctgctgggtaacacaact
catatcagcctgtgctgacgggtgcagcttcctatgtcaaatgcaagcct
tttgtagaagaaaactacctctgttgggtagacgttcaaactgaaccaca
gacagacacctttttagaaaagctctgttaaccaatttatgtgtacattg
cttcttttttaattgattgcatattttttgacaggcaaagtgaagaacca
ccctgcctccatcataggcttaagagttgtcttttagtagagacaaacta
cgttcattcctgtttgtgattaaacctctgttttccaagaattgtactat
acccccacctgtcatcttaatgaaaaatggttctgcactgcacgttccag
gaatggcaatcatgccattgcttcaaaatgtttgtaattctcttgcaact
ctacctgaatttggaaggattgcatgaccaccacctaggactactttgtt
gggttgctatggctaccttgttattcccaccttgccatcatgtctttgtt
tcagagagaccagcttgttgggtttctgttctgcccctggaacgctgcct
atttttcccaccaaacctttcatttggaaaccccagcgctgagatagaaa
agccttctctttctcacatgcagtgcagacttcaagcccccacctacatg
ggaggcagcccacgcacaggaatttttaaaagctggctttcattaattgg
ccatgatgatttggggtaagtgatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_44280840_44281434
seq2: B6Ng01-193P04.b_45_639

seq1  GAATTCATTAGCACTGAACCCTGAGCAAACTATCTGGGCTTAGACTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCACTGAACCCTGAGCAAACTATCTGGGCTTAGACTCTAG  50

seq1  ATTTCCCATTTACTATGTATTTCCCTTAGCATATGCCTTTCCTATCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCATTTACTATGTATTTCCCTTAGCATATGCCTTTCCTATCTGTA  100

seq1  AAACAAAGGAATGCTATTTGTATCTTAGGGTTCTTATGAAGAGTAAATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGGAATGCTATTTGTATCTTAGGGTTCTTATGAAGAGTAAATCG  150

seq1  GTTAACATTTCTAACTCACATAGTGCCTGGTAAACTCTTTGTACTTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACATTTCTAACTCACATAGTGCCTGGTAAACTCTTTGTACTTCTTA  200

seq1  AAATAACTCTAAAGCTGAACGTTTATTATGTTTTAGGCAGTCCCAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCTAAAGCTGAACGTTTATTATGTTTTAGGCAGTCCCAGATTA  250

seq1  TACACCACTATGTGTTTTATGTTTTATGAACTGACCAGATGTATGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCACTATGTGTTTTATGTTTTATGAACTGACCAGATGTATGAAGAT  300

seq1  CATCTCATGTAATTAAAGTGTCTGATAAGAATATCCCTCTTTGCCATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGTAATTAAAGTGTCTGATAAGAATATCCCTCTTTGCCATTAC  350

seq1  GAAAACAGCTACATCTGCAATAGTGTCTGGGTGTGGTGGTTGTTTATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCTACATCTGCAATAGTGTCTGGGTGTGGTGGTTGTTTATGGG  400

seq1  ATGGATCCCCAGGTAGGGAAGTCTCTGGATAGTCATTTCTTCCGTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCCCCAGGTAGGGAAGTCTCTGGATAGTCATTTCTTCCGTCTCTG  450

seq1  CTTCGAACTTTGTCTCTGTAACTCCTTCCATAGGCATTTTGTTCCCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGAACTTTGTCTCTGTAACTCCTTCCATAGGCATTTTGTTCCCCAGC  500

seq1  TGACAGGAGCCTGATATACCTGTCTCCTGAGAGACTCTGCCAGTGCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGAGCCTGATATACCTGTCTCCTGAGAGACTCTGCCAGTGCCTGA  550

seq1  CTAATATAGAAGTGGTTGCTCACAGCCATCCATTGGAAAGAGCAC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATAGAAGTGGTTGCTCACAGCCATCCATTGGAAAGAGCAC  595


seq1: chr11_44418826_44419436
seq2: B6Ng01-193P04.g_72_682 (reverse)

seq1  AATTCAGGTAGAGTTGCAAGAGAATTACAAACATTTTGAAGCAATGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTAGAGTTGCAAGAGAATTACAAACATTTTGAAGCAATGGCAT  50

seq1  GATTGCCATTCCTGGAACGTGCAGTGCAGAACCATTTTTCATTAAGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCATTCCTGGAACGTGCAGTGCAGAACCATTTTTCATTAAGATGA  100

seq1  CAGGTGGGGGTATAGTACAATTCTTGGAAAACAGAGGTTTAATCACAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGGGTATAGTACAATTCTTGGAAAACAGAGGTTTAATCACAAAC  150

seq1  AGGAATGAACGTAGTTTGTCTCTACTAAAAGACAACTCTTAAGCCTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAACGTAGTTTGTCTCTACTAAAAGACAACTCTTAAGCCTATGA  200

seq1  TGGAGGCAGGGTGGTTCTTCACTTTGCCTGTCAAAAAATATGCAATCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGGGTGGTTCTTCACTTTGCCTGTCAAAAAATATGCAATCAAT  250

seq1  TAAAAAAGAAGCAATGTACACATAAATTGGTTAACAGAGCTTTTCTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGAAGCAATGTACACATAAATTGGTTAACAGAGCTTTTCTAAAA  300

seq1  AGGTGTCTGTCTGTGGTTCAGTTTGAACGTCTACCCAACAGAGGTAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTGTCTGTGGTTCAGTTTGAACGTCTACCCAACAGAGGTAGTTT  350

seq1  TCTTCTACAAAAGGCTTGCATTTGACATAGGAAGCTGCACCCGTCAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACAAAAGGCTTGCATTTGACATAGGAAGCTGCACCCGTCAGCAC  400

seq1  AGGCTGATATGAGTTGTGTTACCCAGCAGGTCCGGGTTCTCAGTGGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATATGAGTTGTGTTACCCAGCAGGTCCGGGTTCTCAGTGGGTTC  450

seq1  AGCATTTGCTGACCTTCCACCCACTGCGTACTGTTGGCGATCAGGAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGCTGACCTTCCACCCACTGCGTACTGTTGGCGATCAGGAGCTC  500

seq1  CTCACAGCAGAAGGCAAACTGATGTGTCCACCTCTGCTTTTGGAAGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGCAGAAGGCAAACTGATGTGTCCACCTCTGCTTTTGGAAGAAGT  550

seq1  GACCTGAGCGCACTCTCATCTCCCATTGGATGCTGTGTAGTCAGTAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGAGCGCACTCTCATCTCCCATTGGATGCTGTGTAGTCAGTAAAGA  600

seq1  AGAAGGCTGCA  611
      |||||||||||
seq2  AGAAGGCTGCA  611


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