BAC Information

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BAC

Clone NameB6Ng01-194A17
Chromosome11 (Build37)
Map Location 12,645,484 - 12,646,470
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194A17.bB6Ng01-194A17.g
ACCGA016845GA016846
length770985
definitionB6Ng01-194A17.b B6Ng01-194A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggttatttggttt
tctggggcctaacttcttgagttctttgtatacattggatattagctccc
tattggatttaggattggtaaagaacctttcccaatctattggtttcctt
ttttgtcttattgacagtctcttttgcttttcagaagctttgcaaatttt
atgacgtcccatttgtcgattcttgattttatagcacaagccattggtgt
tctgttaaggattttttctcctgtgccttttctcctagctttgaggctct
tccccactttcttctctaaaagtttcagtgtctctggttttatgtagagt
tccttgatccacttaaacttgagctttttataacaagataagaatggaac
aattctcattcttctacatgctaatctccagttgagccagcagcaccatt
tgttgaaaatgccccagtgcaggggaatgccagggccaggattcaggagt
gggtgggttggggaacaggactgggtgagggtataggggactttcgggat
agcatttgaaatgtaaataaaaaaattaataaaaaagactaaaaataata
aaaggatgacaaaataaaaaaagaaagaaaaagaaaaatgaaaatgctgt
ctttttttcctactggatgggttttagctccttagtcaaagctcaagtga
ccataggtgtatgggttcaatttctggggtcttaaatttctattccattg
atctaacctgtttgccattg

gaattcatcttgaatcccagaactcttatagtctgggttcaacctaatat
ttagttcggtgactgcaagcaaagagacccaggatcattattttattttt
gtttgcagcaatattatgttaatttctttgttttattttaacctctacaa
acataaagttatttctcaaaatctctagaggtattcttattgttaaaata
acttcaaattctcttttcagagaaccttggtggggagaataattacaggg
ttctgacattgttctacaattgcctcacagcaaagtagcgaaggtctctg
tgtcttttgctcatctggcttaaacataaggaaagaaaactgaagctctg
tacagatgtttgtcaagcagtcctcttagtgctttgtacactatctaaat
ttcactacttaattccatgctgttggtattcacctcccaatgtaccaaac
tagaaaattaatatcctgttaccataaggttacacaacctcgtgcaagta
gtctgaggaaagattgaatacaatttgactttatataagacctgttggat
tttctgatagagcctttgtcctttcttaatatttacaatgtgattgctaa
gtatctcagaaccaaagcccagcaaccattcaaattcaagccccaaattt
tagctatttcatatcatattcatacactcactagttgaatatcttaattt
actcaaaagagtgatgtgcctggaacattctaaaacaacaaaatatatca
gaaatggtttctgcccattagtacatttgcaaactgctaaaaaaaaaaaa
aaggaaactttatacttaattaaaattaagacatgtccatgtctctagtc
aagaagaggagcagctatgtatcaaaagatggcctagtcggccatcactg
gaaagagagcccattggacacgcaaactttgtatgcccagtacaggggaa
cgtcagggcaaaagggggagtggggtgggtagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12645484_12646470
seq2: B6Ng01-194A17.g_65_1049 (reverse)

seq1  CCCCTACCCA-CCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTG  49
      |||||||||| |||||||||||||||  |||||| |||||||||||||| 
seq2  CCCCTACCCACCCCACTCCCCCTTTT--GCCCTGACGTTCCCCTGTACT-  47

seq1  GGGCATACAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCC  99
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGCATACAAAGTTTGCGTGTCCAATGGG-CTCTCTTTCCAGTGATGGCC  96

seq1  GACTAGGCCATCTTTTGATACATAGCTGCTCCTCTTCTTGACTAGAGACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCATCTTTTGATACATAGCTGCTCCTCTTCTTGACTAGAGACA  146

seq1  TGGACATGTCTTAATTTTAATTAAGTATAAAGTTTCC-TTTTTTTTTTTT  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGACATGTCTTAATTTTAATTAAGTATAAAGTTTCCTTTTTTTTTTTTT  196

seq1  TAGCAGTTTGCAAATGTACTAATGGGCAGAAACCATTTCTGATATATTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTGCAAATGTACTAATGGGCAGAAACCATTTCTGATATATTTT  246

seq1  GTTGTTTTAGAATGTTCCAGGCACATCACTCTTTTGAGTAAATTAAGATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTAGAATGTTCCAGGCACATCACTCTTTTGAGTAAATTAAGATA  296

seq1  TTCAACTAGTGAGTGTATGAATATGATATGAAATAGCTAAAATTTGGGGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTAGTGAGTGTATGAATATGATATGAAATAGCTAAAATTTGGGGC  346

seq1  TTGAATTTGAATGGTTGCTGGGCTTTGGTTCTGAGATACTTAGCAATCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTGAATGGTTGCTGGGCTTTGGTTCTGAGATACTTAGCAATCAC  396

seq1  ATTGTAAATATTAAGAAAGGACAAAGGCTCTATCAGAAAATCCAACAGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATATTAAGAAAGGACAAAGGCTCTATCAGAAAATCCAACAGGT  446

seq1  CTTATATAAAGTCAAATTGTATTCAATCTTTCCTCAGACTACTTGCACGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATAAAGTCAAATTGTATTCAATCTTTCCTCAGACTACTTGCACGA  496

seq1  GGTTGTGTAACCTTATGGTAACAGGATATTAATTTTCTAGTTTGGTACAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGTAACCTTATGGTAACAGGATATTAATTTTCTAGTTTGGTACAT  546

seq1  TGGGAGGTGAATACCAACAGCATGGAATTAAGTAGTGAAATTTAGATAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTGAATACCAACAGCATGGAATTAAGTAGTGAAATTTAGATAGT  596

seq1  GTACAAAGCACTAAGAGGACTGCTTGACAAACATCTGTACAGAGCTTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGCACTAAGAGGACTGCTTGACAAACATCTGTACAGAGCTTCAG  646

seq1  TTTTCTTTCCTTATGTTTAAGCCAGATGAGCAAAAGACACAGAGACCTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCTTATGTTTAAGCCAGATGAGCAAAAGACACAGAGACCTTC  696

seq1  GCTACTTTGCTGTGAGGCAATTGTAGAACAATGTCAGAACCCTGTAATTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGCTGTGAGGCAATTGTAGAACAATGTCAGAACCCTGTAATTA  746

seq1  TTCTCCCCACCAAGGTTCTCTGAAAAGAGAATTTGAAGTTATTTTAACAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCACCAAGGTTCTCTGAAAAGAGAATTTGAAGTTATTTTAACAA  796

seq1  TAAGAATACCTCTAGAGATTTTGAGAAATAACTTTATGTTTGTAGAGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATACCTCTAGAGATTTTGAGAAATAACTTTATGTTTGTAGAGGTT  846

seq1  AAAATAAAACAAAGAAATTAACATAATATTGCTGCAAACAAAAATAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACAAAGAAATTAACATAATATTGCTGCAAACAAAAATAAAAT  896

seq1  AATGATCCTGGGTCTCTTTGCTTGCAGTCACCGAACTAAATATTAGGTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCTGGGTCTCTTTGCTTGCAGTCACCGAACTAAATATTAGGTTG  946

seq1  AACCCAGACTATAAGAGTTCTGGGATTCAAGATGAATTC  987
      |||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGACTATAAGAGTTCTGGGATTCAAGATGAATTC  985


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