BAC Information

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BAC

Clone NameB6Ng01-195J02
Chromosome11 (Build37)
Map Location 92,511,462 - 92,644,845
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC382545, LOC100039286, Car10, LOC629636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195J02.bB6Ng01-195J02.g
ACCGA017952GA017953
length1,1301,112
definitionB6Ng01-195J02.b B6Ng01-195J02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,643,724 - 92,644,845)(92,511,462 - 92,512,583)
sequence
gaattcatctacaaacacagaacagatggtgtttaattggatagaaatgg
aataattatgttaataagtcctttttatagtcagagatggcttttaattc
tttttatgggtctgaaattaaaatatgcgcacattatttggatcttgact
ccatccattttcttccctgggccaaacaggcctcagacagcagagatttg
agtcatgaagatcaggtcagtaggaagtcctccttttctgctgctcttgt
gtgcccacctggctgttgggcagatgttctcctgtagggtacaaagatct
ctcaacattaagttttaattgtgtttccataattgttgtttaaatgtttg
gaattcatttctaggagatgattattctatgctaatcagtgctcaattta
aatcagaaaaagtccaataaacaaccacaacaagagaaacagaattctcc
aagcatttatagtcagtgtctaaaactgttagtactctaaatcatgactg
tggatgagtaatctcttgaagtctaacacaggacaaacacagactccctg
taatcactctgctctactcttatttgttttggactcgacttgatttgaga
agatactggagctctgtcaataagcaacagacaacaatttctttgaatgg
attttaagctatattttgaagacccggcatcttttctgtataagaggttg
aagaagaatgctcaagacccttcccccaccatggcaaaatacaggagcct
gctactcagaaactctaaatcttgagtaagaaaagaaagtgaaagacaga
aaattctcaactttttgaaacatgtgattaatcagagcacaggcaagtca
gcttaataaagtaaagtgtgtttggcattaggcaccaagtggctcatttc
tagtgtggatttatcaagataatgaattttagtaaaaggtttccacagtg
atttcaggcagctttaaggtctgcagtgaatctctgattcttctcctata
aaaacactatgataagtgaatcaataagtgcaataggaatagatgctggc
catgtgcagaaaaaccacaggttaagaacttgccatagattgcctgtagt
aaataaatatgtaagcttatattctagaga

gaattcataaaaatgtatatcatgaactgaaatactgcactgtgttacat
ataaggctttgacttttaggcttatcctattttagaaaatacaggggcaa
tacttataaaacaaatatttgatttacaattggacaaaattaaattgttt
ttcttctgtctttgaaactatgttagtcacacacacacactcatacatga
acatgtgcacacatacatatatgtacattaaatgtaatatacttccatgg
aagaaatgattttgctgttatgtgaatcaccaatattcatcagtagctag
aaaagtgactactacctagtatttagaggtgtttattaaatgcatgtgtc
cagttctacagtataaattaaatgtctacataaaaattgagtaaatgatt
atctagtcccaggaaacttagataactgactaacctcatttaaaatgtga
tctttgtggtttaaacatactcacaaccaaaggaaacaaaccagaacaca
ttaccctgactatattaaaaggtgccatctctcacctagttttatccaaa
tatatagtcagagcaatgagctaaatggactccccttccccttagaattg
gcttacacattcagatagacttatagaaaaatgttttcatgacttgagct
agacaaagtgtttttaagtgtaacttcagaaatgtcaatcgaaaaatacg
ataaagtagattgggggcaggttcaagttttagaacaaatactggtaaaa
agacctgcatagagaatacaattggaaacaccccaaattcaacaggaaga
agaaaaaaagctttaagaaatagacagaaactataagcaagaacagtatt
aaaatataaaacctgaagcccagtgtcttagtcattagggaaacatcata
aaacaaagggagttagaatggaatgtagaataaatcctgaaactggtggt
aaaaaagcaattgtaataactcattgctgacagacatgggatgtttttca
aaatcatgattgtctacttatatttttaatggctattttattattgcatt
taatgtaatccctttctggtaccccacaccacctccggaaactttaagcc
tcatgctccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92643724_92644845
seq2: B6Ng01-195J02.b_45_1174 (reverse)

seq1  TCTCTAGAATATAAGGTTTCCATA-TTATTTAACCTACAGGC-ATCTATG  48
      |||||||||||||| | || |||| |||||||  |||||||| |||||||
seq2  TCTCTAGAATATAA-GCTTACATATTTATTTA--CTACAGGCAATCTATG  47

seq1  --CAGTTCTT-ACCTGTG--TTTTCTGCACAATGCCAGCATCTA-TCCTA  92
         ||||||| |||||||  |||||||||||  ||||||||||| |||||
seq2  GCAAGTTCTTAACCTGTGGTTTTTCTGCACATGGCCAGCATCTATTCCTA  97

seq1  -TGCACTTA-TGATTCACTTATCATAGTGTTTTTATAGGAGAAGAATCAG  140
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTATTGATTCACTTATCATAGTGTTTTTATAGGAGAAGAATCAG  147

seq1  AGATTCACTGCAGACC-TAAAGCTGCCTGAAATCACTGTGGAAACCTTTT  189
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGATTCACTGCAGACCTTAAAGCTGCCTGAAATCACTGTGGAAACCTTTT  197

seq1  ACTAAAATTCATTATCTTGATAAATCCACACTAGAAATGAGCCACTTGGT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTCATTATCTTGATAAATCCACACTAGAAATGAGCCACTTGGT  247

seq1  GCCTAATGCCAAACACACTTTACTTTATTAAGCTGACTTGCCTGTGCTCT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATGCCAAACACACTTTACTTTATTAAGCTGACTTGCCTGTGCTCT  297

seq1  GATTAATCACATGTTTCAAAAAGTTGAGAATTTTCTGTCTTTCACTTTCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCACATGTTTCAAAAAGTTGAGAATTTTCTGTCTTTCACTTTCT  347

seq1  TTTCTTACTCAAGATTTAGAGTTTCTGAGTAGCAGGCTCCTGTATTTTGC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACTCAAGATTTAGAGTTTCTGAGTAGCAGGCTCCTGTATTTTGC  397

seq1  CATGGTGGGGGAAGGGTCTTGAGCATTCTTCTTCAACCTCTTATACAGAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGGGGGAAGGGTCTTGAGCATTCTTCTTCAACCTCTTATACAGAA  447

seq1  AAGATGCCGGGTCTTCAAAATATAGCTTAAAATCCATTCAAAGAAATTGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCGGGTCTTCAAAATATAGCTTAAAATCCATTCAAAGAAATTGT  497

seq1  TGTCTGTTGCTTATTGACAGAGCTCCAGTATCTTCTCAAATCAAGTCGAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGCTTATTGACAGAGCTCCAGTATCTTCTCAAATCAAGTCGAG  547

seq1  TCCAAAACAAATAAGAGTAGAGCAGAGTGATTACAGGGAGTCTGTGTTTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAAATAAGAGTAGAGCAGAGTGATTACAGGGAGTCTGTGTTTG  597

seq1  TCCTGTGTTAGACTTCAAGAGATTACTCATCCACAGTCATGATTTAGAGT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTTAGACTTCAAGAGATTACTCATCCACAGTCATGATTTAGAGT  647

seq1  ACTAACAGTTTTAGACACTGACTATAAATGCTTGGAGAATTCTGTTTCTC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGTTTTAGACACTGACTATAAATGCTTGGAGAATTCTGTTTCTC  697

seq1  TTGTTGTGGTTGTTTATTGGACTTTTTCTGATTTAAATTGAGCACTGATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGGTTGTTTATTGGACTTTTTCTGATTTAAATTGAGCACTGATT  747

seq1  AGCATAGAATAATCATCTCCTAGAAATGAATTCCAAACATTTAAACAACA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAATAATCATCTCCTAGAAATGAATTCCAAACATTTAAACAACA  797

seq1  ATTATGGAAACACAATTAAAACTTAATGTTGAGAGATCTTTGTACCCTAC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGAAACACAATTAAAACTTAATGTTGAGAGATCTTTGTACCCTAC  847

seq1  AGGAGAACATCTGCCCAACAGCCAGGTGGGCACACAAGAGCAGCAGAAAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACATCTGCCCAACAGCCAGGTGGGCACACAAGAGCAGCAGAAAA  897

seq1  GGAGGACTTCCTACTGACCTGATCTTCATGACTCAAATCTCTGCTGTCTG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACTTCCTACTGACCTGATCTTCATGACTCAAATCTCTGCTGTCTG  947

seq1  AGGCCTGTTTGGCCCAGGGAAGAAAATGGATGGAGTCAAGATCCAAATAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGTTTGGCCCAGGGAAGAAAATGGATGGAGTCAAGATCCAAATAA  997

seq1  TGTGCGCATATTTTAATTTCAGACCCATAAAAAGAATTAAAAGCCATCTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGCATATTTTAATTTCAGACCCATAAAAAGAATTAAAAGCCATCTC  1047

seq1  TGACTATAAAAAGGACTTATTAACATAATTATTCCATTTCTATCCAATTA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATAAAAAGGACTTATTAACATAATTATTCCATTTCTATCCAATTA  1097

seq1  AACACCATCTGTTCTGTGTTTGTAGATGAATTC  1122
      |||||||||||||||||||||||||||||||||
seq2  AACACCATCTGTTCTGTGTTTGTAGATGAATTC  1130


seq1: chr11_92511462_92512583
seq2: B6Ng01-195J02.g_65_1176

seq1  GAATTCATAAAAATGTATATCATGAACTGAAATACTGCACTGTGTTACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAAATGTATATCATGAACTGAAATACTGCACTGTGTTACAT  50

seq1  ATAAGGCTTTGACTTTTAGGCTTATCCTATTTTAGAAAATACAGGGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTTTGACTTTTAGGCTTATCCTATTTTAGAAAATACAGGGGCAA  100

seq1  TACTTATAAAACAAATATTTGATTTACAATTGGACAAAATTAAATTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATAAAACAAATATTTGATTTACAATTGGACAAAATTAAATTGTTT  150

seq1  TTCTTCTGTCTTTGAAACTATGTTAGTCACACACACACACTCATACATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGTCTTTGAAACTATGTTAGTCACACACACACACTCATACATGA  200

seq1  ACATGTGCACACATACATATATGTACATTAAATGTAATATACTTCCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCACACATACATATATGTACATTAAATGTAATATACTTCCATGG  250

seq1  AAGAAATGATTTTGCTGTTATGTGAATCACCAATATTCATCAGTAGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGATTTTGCTGTTATGTGAATCACCAATATTCATCAGTAGCTAG  300

seq1  AAAAGTGACTACTACCTAGTATTTAGAGGTGTTTATTAAATGCATGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGACTACTACCTAGTATTTAGAGGTGTTTATTAAATGCATGTGTC  350

seq1  CAGTTCTACAGTATAAATTAAATGTCTACATAAAAATTGAGTAAATGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTACAGTATAAATTAAATGTCTACATAAAAATTGAGTAAATGATT  400

seq1  ATCTAGTCCCAGGAAACTTAGATAACTGACTAACCTCATTTAAAATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTCCCAGGAAACTTAGATAACTGACTAACCTCATTTAAAATGTGA  450

seq1  TCTTTGTGGTTTAAACATACTCACAACCAAAGGAAACAAACCAGAACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGGTTTAAACATACTCACAACCAAAGGAAACAAACCAGAACACA  500

seq1  TTACCCTGACTATATTAAAAGGTGCCATCTCTCACCTAGTTTTATCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGACTATATTAAAAGGTGCCATCTCTCACCTAGTTTTATCCAAA  550

seq1  TATATAGTCAGAGCAATGAGCTAAATGGACTCCCCTTCCCCTTAGAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTCAGAGCAATGAGCTAAATGGACTCCCCTTCCCCTTAGAATTG  600

seq1  GCTTACACATTCAGATAGACTTATAGAAAAATGTTTTCATGACTTGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACACATTCAGATAGACTTATAGAAAAATGTTTTCATGACTTGAGCT  650

seq1  AGACAAAGTGTTTTTAAGTGTAACTTCAGAAATGTCAATCGAAAAATACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGTGTTTTTAAGTGTAACTTCAGAAATGTCAATCGAAAAATACG  700

seq1  ATAAAGTAGATTGGGGGCAGGTTCAAGTTTTAGAACAAATACTGGTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTAGATTGGGGGCAGGTTCAAGTTTTAGAACAAATACTGGTAAAA  750

seq1  AGACCTGCATAGAGAATACAATTGGAAACACCCCAAATTCAACAGGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCATAGAGAATACAATTGGAAACACCCCAAATTCAACAGGAAGA  800

seq1  AGAAAAAAAGCTTTAAGAAATAGACAGAAACTATAAGCAAGAACAGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGCTTTAAGAAATAGACAGAAACTATAAGCAAGAACAGTATT  850

seq1  AAAATATAAAACCTGAAGCCCAGTGTCTTAGTCATTAGGGAAACATCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAAACCTGAAGCCCAGTGTCTTAGTCATTAGGGAAACATCATA  900

seq1  AAACAAAGGGAGTTAGAATGGAATGTAGAATAAATCCTGAAACT-GTGGT  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAACAAAGGGAGTTAGAATGGAATGTAGAATAAATCCTGAAACTGGTGGT  950

seq1  AAAAAAGCAA-TGTAATAACTCATTGCTGACAGAACAT-GGATGTTTTCA  997
      |||||||||| |||||||||||||||||||||| |||| |||||||||  
seq2  AAAAAAGCAATTGTAATAACTCATTGCTGACAG-ACATGGGATGTTTTTC  999

seq1  AAAATCATGATTGTTCTTAACTATAATTTTTATTGGCTATTTTATTTATT  1047
      ||||||||||||| |||  |||   ||||||| |||||||||||||   |
seq2  AAAATCATGATTG-TCT--ACTTATATTTTTAATGGCTATTTTATT--AT  1044

seq1  TGCATTTTAAATGTTATCCCCTTTCCTGGTTACCCCACCACCACCCTCCG  1097
      |||||||  ||||| |||||  || |||| ||||||| ||||| ||||||
seq2  TGCATTT--AATGTAATCCC--TTTCTGG-TACCCCA-CACCA-CCTCCG  1087

seq1  GAAAACCTTTA--GCTCATGCCCCTTC  1122
      ||||  |||||   ||||||| |||||
seq2  GAAA--CTTTAAGCCTCATGCTCCTTC  1112


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