BAC Information

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BAC

Clone NameB6Ng01-195P05
Chromosome11 (Build37)
Map Location 26,505,356 - 26,629,859
singlet/doubletdoublet
Overlap genePpia-ps11_266.1
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl, Vrk2, EG628586
Downstream geneOTTMUSG00000005300, LOC666270, LOC100042367, LOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195P05.bB6Ng01-195P05.g
ACCGA018229GA018230
length1,1981,044
definitionB6Ng01-195P05.b B6Ng01-195P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,628,685 - 26,629,859)(26,505,356 - 26,506,399)
sequence
gaattctaattaatcataattattatagtaaacttattttctaagtaaaa
cttttgtgataactcttctttacaacttaatctgtgtctaaaatgaaatg
caagactgtcagccagagctgaggaataacttcatggtatttgcttcata
tgtctaaggccctagactaattctctgatactggaaaaaaaaccaaaaac
caaacaaaatgaaagaaacccactatagcatgtgaatttacaaaggccag
ccataatacaaaacaggtaacgcctctgcagaaccgcaatgaagttgctg
catctcagctgaagacttttcagctccagccacttacaaccatacaggag
ttcaggcccatattatcatattgtctgagctgggaatcccattccttatg
taaacaagattaaaagtcagtgcagggactttttaaagtgacttagtaaa
atgcttgctatgcaagcttgaggaccttaagtttgcattcttccacatcc
atgtaaaaagccagacatggcaggacatacctgtaatctcagcaagaagt
tgctaagctacatagtctcccagaattggtgatctccagtgtgagaccct
gtcttaaaacaatgaagtggagagcaatttaggaaaatattcagcattta
cctctggcctatatgtgcaggtttagatcaacacatgtctgtgtgcacac
gtacacacacacacacacacacacacacacacacacacacacacacacac
gcgcgcgcgcacgcgcgcgtacaaaaatgtacacacacacatacacaaaa
tcaattcaggtgtagtatatgtctctacatgggttaaagccagtgtagat
gaccttgtctgtaaattaatagctagataaagcatagcaacttgtaaata
gacaacagataaaaaggagaggtagaagtacaactatgactttctcaata
agctaattaacctcaagacacaaataactaagggtttttatatcctgtgc
ttgaaataaagtcaagaaagaacaaaaatgttaaatggcaacctgtgtgt
gccaccctcagaataaaagatgaagaatgtccctccgaggtgaatagatt
ggtaatagaacaataacaagttaagtttttataaattacggaagattttt
caaaaagctgagccttctatagcattgaatgacctccatgcctttcgc

gaattcacctgtggaaggcaggcattgaattactatcccatgcatcaaag
atctttttctcttttaagtaatggaagagaaggctacataagccccattc
cttgccagtgacattagcaaagctgcagtaatgtgctaaggtatgaacat
tcaagggccaacacccaggagaaaattagcagtgaggagttctcaccata
atgatgaaggatgctcagtcaactgtggaacagaaagattaccgaactca
tgtgtgagatcaattgttctctggtgctgtctgcagagtctttgcaggat
tatctcacactacatggagccttgttttttaaacatacttaataatttca
tggtggactttttacttacaacaataataaactaataaataaataaaagg
taggaatcagcacagggatggctatgtagaaaggaaattatccaaagcat
tgttcagtaaaatgtgaggaaggttttaacctcttgccaccaaaactccg
tggaaatgtccaatatagatttaagaaggaaaaaaaaaaaacctatgcta
gcaacagaaaataatatgaatattggccactcacaaaaaaaatttagtca
tttttgcactttacaaataatatcacaaagaaagacaaggaatacctttg
ttaaacaaactctttaaaagacacacacacctgaattcagtagagaaaat
gctgatcaaggaacactgtcacaccatgaagtttggaggtgttacaacca
gagggaaaccggaggtgtctcatcatcagaggcatgaacataaacacggt
tcaagacatttatatcatgactgttataaggtcttatgcaatgatgtact
ggtgccatcaatactcatttctcatgtcaagagaaagctaccatgcaccg
gcaatacccagtgtaacttttcttcagagatttctggaagatacatggat
tttttttgtgtttcttgtatttggttgttgtacggtgggtttaatgtact
ggagttgaaagggaaagatggtgttcatgcctctgatggtacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26628685_26629859
seq2: B6Ng01-195P05.b_46_1243 (reverse)

seq1  GCGAAA-GCAT-GAAGTCATTCTATACTAATAGAA-GCTCAACTTTTTGA  47
      |||||| |||| || ||||||| || || |||||| ||||| ||||||||
seq2  GCGAAAGGCATGGAGGTCATTCAATGCT-ATAGAAGGCTCAGCTTTTTGA  49

seq1  AAAATCTCCCTTTATTTAT-AAAACTT-ACTTGTTAT--GTCTAATACC-  92
      ||||||| || | |||||| ||||||| |||||||||   |||| |||| 
seq2  AAAATCTTCCGTAATTTATAAAAACTTAACTTGTTATTGTTCTATTACCA  99

seq1  ATCTATTCACCTCG--AGGACA-TCTTCATCTTTTA-TCTGA-GGTGGCA  137
      ||||||||||||||   ||||| ||||||||||||| ||||| |||||||
seq2  ATCTATTCACCTCGGAGGGACATTCTTCATCTTTTATTCTGAGGGTGGCA  149

seq1  CACACAGTTTGCCATTT-ACATTTT--GTCTT--CTGACTTTATTTC-AG  181
      ||||||| ||||||||| |||||||   ||||   |||||||||||| ||
seq2  CACACAGGTTGCCATTTAACATTTTTGTTCTTTCTTGACTTTATTTCAAG  199

seq1  CACA-GATATAAAAACCC-TAGTTATTTGTGTCTTGAGG-TAATTAGC-T  227
      |||| ||||||||||||| |||||||||||||||||||| |||||||| |
seq2  CACAGGATATAAAAACCCTTAGTTATTTGTGTCTTGAGGTTAATTAGCTT  249

seq1  AATGAG-AAGTCATAGTTGTACTTCTACCTCTCCTTTTTATCTGTTGTCT  276
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAAGTCATAGTTGTACTTCTACCTCTCCTTTTTATCTGTTGTCT  299

seq1  ATTTACAAGTTGCTATGCTTTATCTAGCTATTAATTTACAGACAAGGTCA  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAGTTGCTATGCTTTATCTAGCTATTAATTTACAGACAAGGTCA  349

seq1  TCTACACTGGCTTTAACCCATGTAGAGACATATACTACACCTGAATTGAT  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTGGCTTTAACCCATGTAGAGACATATACTACACCTGAATTGAT  399

seq1  TTTGTGTATGTGTGTGTGTACATTTTTGTACGCGCGCGTGCGCGCGCGCG  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTATGTGTGTGTGTACATTTTTGTACGCGCGCGTGCGCGCGCGCG  449

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACG  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACG  499

seq1  TGTGCACACAGACATGTGTTGATCTAAACCTGCACATATAGGCCAGAGGT  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACACAGACATGTGTTGATCTAAACCTGCACATATAGGCCAGAGGT  549

seq1  AAATGCTGAATATTTTCCTAAATTGCTCTCCACTTCATTGTTTTAAGACA  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGAATATTTTCCTAAATTGCTCTCCACTTCATTGTTTTAAGACA  599

seq1  GGGTCTCACACTGGAGATCACCAATTCTGGGAGACTATGTAGCTTAGCAA  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCACACTGGAGATCACCAATTCTGGGAGACTATGTAGCTTAGCAA  649

seq1  CTTCTTGCTGAGATTACAGGTATGTCCTGCCATGTCTGGCTTTTTACATG  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCTGAGATTACAGGTATGTCCTGCCATGTCTGGCTTTTTACATG  699

seq1  GATGTGGAAGAATGCAAACTTAAGGTCCTCAAGCTTGCATAGCAAGCATT  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGAAGAATGCAAACTTAAGGTCCTCAAGCTTGCATAGCAAGCATT  749

seq1  TTACTAAGTCACTTTAAAAAGTCCCTGCACTGACTTTTAATCTTGTTTAC  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGTCACTTTAAAAAGTCCCTGCACTGACTTTTAATCTTGTTTAC  799

seq1  ATAAGGAATGGGATTCCCAGCTCAGACAATATGATAATATGGGCCTGAAC  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAATGGGATTCCCAGCTCAGACAATATGATAATATGGGCCTGAAC  849

seq1  TCCTGTATGGTTGTAAGTGGCTGGAGCTGAAAAGTCTTCAGCTGAGATGC  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTATGGTTGTAAGTGGCTGGAGCTGAAAAGTCTTCAGCTGAGATGC  899

seq1  AGCAACTTCATTGCGGTTCTGCAGAGGCGTTACCTGTTTTGTATTATGGC  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTCATTGCGGTTCTGCAGAGGCGTTACCTGTTTTGTATTATGGC  949

seq1  TGGCCTTTGTAAATTCACATGCTATAGTGGGTTTCTTTCATTTTGTTTGG  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTTGTAAATTCACATGCTATAGTGGGTTTCTTTCATTTTGTTTGG  999

seq1  TTTTTGGTTTTTTTTCCAGTATCAGAGAATTAGTCTAGGGCCTTAGACAT  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTTTTTTTCCAGTATCAGAGAATTAGTCTAGGGCCTTAGACAT  1049

seq1  ATGAAGCAAATACCATGAAGTTATTCCTCAGCTCTGGCTGACAGTCTTGC  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCAAATACCATGAAGTTATTCCTCAGCTCTGGCTGACAGTCTTGC  1099

seq1  ATTTCATTTTAGACACAGATTAAGTTGTAAAGAAGAGTTATCACAAAAGT  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTAGACACAGATTAAGTTGTAAAGAAGAGTTATCACAAAAGT  1149

seq1  TTTACTTAGAAAATAAGTTTACTATAATAATTATGATTAATTAGAATTC  1175
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAGAAAATAAGTTTACTATAATAATTATGATTAATTAGAATTC  1198


seq1: chr11_26505356_26506399
seq2: B6Ng01-195P05.g_69_1112

seq1  GAATTCACCTGTGGAAGGCAGGCATTGAATTACTATCCCATGCATCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGTGGAAGGCAGGCATTGAATTACTATCCCATGCATCAAAG  50

seq1  ATCTTTTTCTCTTTTAAGTAATGGAAGAGAAGGCTACATAAGCCCCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCTCTTTTAAGTAATGGAAGAGAAGGCTACATAAGCCCCATTC  100

seq1  CTTGCCAGTGACATTAGCAAAGCTGCAGTAATGTGCTAAGGTATGAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGTGACATTAGCAAAGCTGCAGTAATGTGCTAAGGTATGAACAT  150

seq1  TCAAGGGCCAACACCCAGGAGAAAATTAGCAGTGAGGAGTTCTCACCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGCCAACACCCAGGAGAAAATTAGCAGTGAGGAGTTCTCACCATA  200

seq1  ATGATGAAGGATGCTCAGTCAACTGTGGAACAGAAAGATTACCGAACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAGGATGCTCAGTCAACTGTGGAACAGAAAGATTACCGAACTCA  250

seq1  TGTGTGAGATCAATTGTTCTCTGGTGCTGTCTGCAGAGTCTTTGCAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGATCAATTGTTCTCTGGTGCTGTCTGCAGAGTCTTTGCAGGAT  300

seq1  TATCTCACACTACATGGAGCCTTGTTTTTTAAACATACTTAATAATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCACACTACATGGAGCCTTGTTTTTTAAACATACTTAATAATTTCA  350

seq1  TGGTGGACTTTTTACTTACAACAATAATAAACTAATAAATAAATAAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGACTTTTTACTTACAACAATAATAAACTAATAAATAAATAAAAGG  400

seq1  TAGGAATCAGCACAGGGATGGCTATGTAGAAAGGAAATTATCCAAAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATCAGCACAGGGATGGCTATGTAGAAAGGAAATTATCCAAAGCAT  450

seq1  TGTTCAGTAAAATGTGAGGAAGGTTTTAACCTCTTGCCACCAAAACTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTAAAATGTGAGGAAGGTTTTAACCTCTTGCCACCAAAACTCCG  500

seq1  TGGAAATGTCCAATATAGATTTAAGAAGGAAAAAAAAAAAACCTATGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGTCCAATATAGATTTAAGAAGGAAAAAAAAAAAACCTATGCTA  550

seq1  GCAACAGAAAATAATATGAATATTGGCCACTCACAAAAAAAATTTAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGAAAATAATATGAATATTGGCCACTCACAAAAAAAATTTAGTCA  600

seq1  TTTTTGCACTTTACAAATAATATCACAAAGAAAGACAAGGAATACCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCACTTTACAAATAATATCACAAAGAAAGACAAGGAATACCTTTG  650

seq1  TTAAACAAACTCTTTAAAAGACACACACACCTGAATTCAGTAGAGAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAACTCTTTAAAAGACACACACACCTGAATTCAGTAGAGAAAAT  700

seq1  GCTGATCAAGGAACACTGTCACACCATGAAGTTTGGAGGTGTTACAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCAAGGAACACTGTCACACCATGAAGTTTGGAGGTGTTACAACCA  750

seq1  GAGGGAAACCGGAGGTGTCTCATCATCAGAGGCATGAACATAAACACGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAACCGGAGGTGTCTCATCATCAGAGGCATGAACATAAACACGGT  800

seq1  TCAAGACATTTATATCATGACTGTTATAAGGTCTTATGCAATGATGTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACATTTATATCATGACTGTTATAAGGTCTTATGCAATGATGTACT  850

seq1  GGTGCCATCAATACTCATTTCTCATGTCAAGAGAAAGCTACCATGCACCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCATCAATACTCATTTCTCATGTCAAGAGAAAGCTACCATGCACCG  900

seq1  GCAATACCCAGTGTAACTTT--CTCAGAGATTTCTGGAAGAATACATGGA  948
      ||||||||||||||||||||   ||||||||||||||||| |||||||||
seq2  GCAATACCCAGTGTAACTTTTCTTCAGAGATTTCTGGAAG-ATACATGGA  949

seq1  TTTTTTTTGTTGTTTCTTGTTATTTGGTTGTTTGTACGGTTGGGTTAATG  998
      ||||||||| ||||||||| |||||||||| ||||||||| || ||||||
seq2  TTTTTTTTG-TGTTTCTTG-TATTTGGTTG-TTGTACGGTGGGTTTAATG  996

seq1  TACT-GAGTTGAAAGGTGAAAGATGGTGTTCATG-CTCTGA-GGTAGAT  1044
      |||| ||||||||||| ||||||||||||||||| |||||| |||| ||
seq2  TACTGGAGTTGAAAGG-GAAAGATGGTGTTCATGCCTCTGATGGTACAT  1044


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