BAC Information

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BAC

Clone NameB6Ng01-196F14
Chromosome11 (Build37)
Map Location 7,519,116 - 7,650,836
singlet/doubletdoublet
Overlap genenone
Upstream geneTbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196F14.bB6Ng01-196F14.g
ACCGA018515GA018516
length1,1661,035
definitionB6Ng01-196F14.b B6Ng01-196F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,519,116 - 7,520,234)(7,650,287 - 7,650,836)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
caggactatttttaattgacatcgtggtagacaaattagacatgctacat
catctaagtgtatgaaacacatagtctatttttctgaaatttaagtatgt
ctatgcatgtttgtctgtgtatgtgtttagtatacacatgcatataattt
cctagtaaacattttgagtatgtagtttgttgttaatacttcagaataaa
aatgtggtcattattttttcaaatcctctctttgcccggttctcgaacat
ttctgtatatttcaattgcacacctattaatcctagagctttgacatgga
gctcgggtgttctgctctggcttctctgtggcttggtttagatcatttct
gttgaactgtttcagctttatttgttcttcctagtacttcaacgcatgtg
tactaatccttttaatactttaccatggcgctagatgttctgttgtgttt
ctttgtgttttagttgggacatttctgttgacctattttcaattccccct
cacccactccctctgattcctgatggttctacctatgatctagctatcaa
ggtcatcttagcatcatgagaatgatgttttctcctcgggaaccttgatt
gctgatcatggacagg

gaattcagtaagaaggttacctattcagtaacattcaaatttacttctag
tagagacagtgaaactaattaggcattacaaagaatggagctaaaatagc
acagggctagtctgcagagtgattacttaggacagtagccagtctcaccc
aaacaagggaatacacaatggtctagctaataggtgggtttaccatgtaa
cagttagggaatcccactgagacaggaatcttcactacagccaggtattg
caggctatattgcatattagaagcaagttggtgaattcttctgacaaatg
gagattctccacagatacttaaaagaacagccaagttacactcatacaag
aatttatcaaggcctagaaaataggggtttgtggtgttacattattcatg
agaaggtctgctagagcagaacccactggtgctagctttcacaaggccca
aaggagcagcacaaagtgtgactagggtgtgaaatccttacctgtcatta
gctgaccctaggcagggctgttttatctttactgtaaatattacctggtt
cctgtaagtccttctgaagtcattcctttgttttgtgtcaggtaacttca
atgtactttgcctgctgtgacatcctacccctatgttttctgtattatat
aagactggtgttcactttgtgacaatacattcagatactacacaacttct
tgtgttgatgtttgtctgtcattcaccaactccttgtccacctgtaacca
gagacccgttctactcagacagcaaccaaaaagggtctgtggcaacattt
aaagtcactctaccttccacaatcccagatattcaggaggttgagacagg
agcattataggtgggctacatgcttgggctaaaagtgagttcaaggtcac
tcggcaactcagtggaatgctatctcaaataagtataaagggctgggatc
ctcagaataaatgtttgcctaatttgcttgaggtgctctaggttagtcct
caaattgctataaagaaaagaaaaggggtgaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7519116_7520234
seq2: B6Ng01-196F14.b_93_1207

seq1  TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC  50

seq1  TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT  100

seq1  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT  150

seq1  TAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTC  200

seq1  TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT  250

seq1  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT  300

seq1  CCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCA  350

seq1  TTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATG  400

seq1  CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG  450

seq1  ACCATAGGTGTGTGGGTTCATTTCTGGATCTTCAATTCTATTCCATTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGGTGTGTGGGTTCATTTCTGGATCTTCAATTCTATTCCATTGGC  500

seq1  AGGACTATTTTTAATTGACATCGTGGTAGACAAATTAGACATGCTACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTATTTTTAATTGACATCGTGGTAGACAAATTAGACATGCTACATC  550

seq1  ATCTAAGTGTATGAAACACATAGTCTATTTTTCTGAAATTTAAGTATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGTGTATGAAACACATAGTCTATTTTTCTGAAATTTAAGTATGTC  600

seq1  TATGCATGTTTGTCTGTGTATGTGTTTAGTATACACATGCATATAATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGTTTGTCTGTGTATGTGTTTAGTATACACATGCATATAATTTC  650

seq1  CTAGTAAACATTTTGAGTATGTAGTTTGTTGTTAATACTTCAGAATAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAACATTTTGAGTATGTAGTTTGTTGTTAATACTTCAGAATAAAA  700

seq1  ATGTGGTCATTATTTTTTCAAATCCTCTCTTTGCCCGGTTCTCGAACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCATTATTTTTTCAAATCCTCTCTTTGCCCGGTTCTCGAACATT  750

seq1  TCTGTATATTTCAATTGCACACCTATTAATCCTAGAGCTTTGACATGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATTTCAATTGCACACCTATTAATCCTAGAGCTTTGACATGGAG  800

seq1  CTCGGGTGTTCTGCTCTGGCTTCTCTGTGGCTTGGTTTAGATCATTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGTGTTCTGCTCTGGCTTCTCTGTGGCTTGGTTTAGATCATTTCTG  850

seq1  TTGAACTGTTTCAGCTTTATTTGTTCTTCCTAGTACTTCAACGCATGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGTTTCAGCTTTATTTGTTCTTCCTAGTACTTCAACGCATGTGT  900

seq1  ACTAATCCTTTTAATACTTTACCATGGCGCTAGATGTTCTGTTGTGTTTT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTAATCCTTTTAATACTTTACCATGGCGCTAGATGTTCTGTTGTG-TTT  949

seq1  CTTTGTGTTTTAGTTGGGACAATTTCTGTTGACCTATTTTCA--TTCCCC  998
      |||||||||||||||||||| |||||||||||||||||||||  | ||||
seq2  CTTTGTGTTTTAGTTGGGAC-ATTTCTGTTGACCTATTTTCAATTCCCCC  998

seq1  TCACCACTTCCCTTCCTGGTTCCTGATGGGTCTACTTATGATCTAGCTTA  1048
      |||||   |||||  ||| |||||||||| ||||| ||||||||||| ||
seq2  TCACCCACTCCCT--CTGATTCCTGATGGTTCTACCTATGATCTAGC-TA  1045

seq1  TCAAAGTCATC-TAGCATCATGAG-ATGATGTTTTCTCCTCGTAGACTTT  1096
      |||| |||||| |||||||||||| |||||||||||||||||   || ||
seq2  TCAAGGTCATCTTAGCATCATGAGAATGATGTTTTCTCCTCGGGAACCTT  1095

seq1  GTTTTGGTTGTATCATGGACAGG  1119
      | ||  | || ||||||||||||
seq2  GATT--GCTG-ATCATGGACAGG  1115


seq1: chr11_7650287_7650836
seq2: B6Ng01-196F14.g_554_1102 (reverse)

seq1  TCCCT--CCCCCTTTCTTT--CTTATAGCAATTTGAGGACTAAACCTAGA  46
      |||||  |||| |||||||   ||||||||||||||||||| ||||||||
seq2  TCCCTCACCCCTTTTCTTTTCTTTATAGCAATTTGAGGACT-AACCTAGA  49

seq1  GCACCTCAAGCAAATTAGGCAAACATTTATTCTGA-GATCCCAGCCCTTT  95
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCACCTCAAGCAAATTAGGCAAACATTTATTCTGAGGATCCCAGCCCTTT  99

seq1  ATACTTTATTTGAGATAGCATTCCACTGAGTTGCCCGAGGTGACCTTGAA  145
      |||| |||||||||||||||||||||||||||| |||| |||||||||||
seq2  ATAC-TTATTTGAGATAGCATTCCACTGAGTTG-CCGA-GTGACCTTGAA  146

seq1  CTCACTTTTTAGCCCAAGCATGTAGCCCAACCTATAATGCTCCTGTCTCA  195
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCAC-TTTTAGCCCAAGCATGTAGCCC-ACCTATAATGCTCCTGTCTCA  194

seq1  ACCTCCTGAATATCTGGGATTGTGGAAGGTAGAGTGACTTTAAATGTTGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGAATATCTGGGATTGTGGAAGGTAGAGTGACTTTAAATGTTGC  244

seq1  CACAGACCCTTTTTGGTTGCTGTCTGAGTAGAACGGGTCTCTGGTTACAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCCTTTTTGGTTGCTGTCTGAGTAGAACGGGTCTCTGGTTACAG  294

seq1  GTGGACAAGGAGTTGGTGAATGACAGACAAACATCAACACAAGAAGTTGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAAGGAGTTGGTGAATGACAGACAAACATCAACACAAGAAGTTGT  344

seq1  GTAGTATCTGAATGTATTGTCACAAAGTGAACACCAGTCTTATATAATAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATCTGAATGTATTGTCACAAAGTGAACACCAGTCTTATATAATAC  394

seq1  AGAAAACATAGGGGTAGGATGTCACAGCAGGCAAAGTACATTGAAGTTAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACATAGGGGTAGGATGTCACAGCAGGCAAAGTACATTGAAGTTAC  444

seq1  CTGACACAAAACAAAGGAATGACTTCAGAAGGACTTACAGGAACCAGGTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAAAACAAAGGAATGACTTCAGAAGGACTTACAGGAACCAGGTA  494

seq1  ATATTTACAGTAAAGATAAAACAGCCCTGCCTAGGGTCAGCTAATGACAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAGTAAAGATAAAACAGCCCTGCCTAGGGTCAGCTAATGACAG  544

seq1  GTAAG  550
      |||||
seq2  GTAAG  549


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