BAC Information

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BAC

Clone NameB6Ng01-196I07
Chromosome11 (Build37)
Map Location 58,206,376 - 58,207,436
singlet/doubletsinglet
Overlap geneLOC624814
Upstream geneLOC667878, 1810073G14Rik, Mfap3, Galnt10, Sap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik
Downstream gene1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691, Hist3h2ba, Hist3h2bb, Hist3h2a, LOC382523, Trim17, Trim11, Obscn, A230051G13Rik, 4930543L23Rik, Gja12, Guk1, Mrpl55, 2310033P09Rik, Arf1, Wnt3a, Wnt9a, Gm249
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196I07.bB6Ng01-196I07.g
ACCGA018639GA018640
length1,163881
definitionB6Ng01-196I07.b B6Ng01-196I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatactgaatgcctaagaagcacctgaaaaaatg
ttcaacatccttaatcatcaaggaaatgcaaatcaaaacaaccctgatat
tctatctcacaccagtcagaatggctaagatcaaatattcaggtgacagc
aaatgctggtgaggatgaggagaaagaggaacactcctctattgttggtg
ggattgcaagctggtaaaaccactctggaaatcagtctggtggttcctca
gaaaattcaacatagtactaccagaagatccagcaataccactcctgcgc
atattcccaaaatatgctccaacttgtaataaggacacatgccccactat
gttcatggcagccttatttataatagcccaaagctggaaagaacccaatg
tccctcaacagaggaatggatacagaaaatgtgatatatttacacaatgg
agtactactcagcaattaaaaacaatgaatttatgaaatccttagacaaa
tggttggatctggaggatatcatcctgagtgagataatccatccacaaaa
gaacacacatgataggccctcactgataagtggatattaacccagatact
tagactagccgagacacaatttgcaaaacacatgaaactcaagaagaagg
aagaccaaaatgtggatacttcattccttcttagaatggggaacaaaata
cccatggaaggagttacggagacaaagttcagagctgatacagaagaaag
gaccatccagagactgtcccacccagggattcatcccatatacgaccacc
aaacccagacaccattgtatatgccagcaagattttgctgacaggattct
gatatagctatctcttgtgaggctatgccagtgcctggcaaatacagaag
tggtgctcacagtcatctattggatagaacactgggcccctaaattagga
gctaagaaagcacccaagagctaatggggtcggcaacctataggatgatc
aacaatatgaactaaccagtaacccacagaactgtgttctctagttgcat
attgtagcagaggatgacctagttggcatcatgggaggagaggccttgat
ccttggagattatatgccagtacagggaatgccagaacaggaaaaggaat
gggttggctcggc
gaattcttgtgccagctccactggttcagccactacccgctttacctcat
cgtcgtaacgaagctcaacatagccagcgaggggaaagtctttccggaaa
ggatgtccctcgaagccataatctgtcaggatccttcttaaatcagggtg
gttaaaaaagaaaactccaaacatgtcccagacctccctctcataccaat
tggccgcgatgtgcacagacactatagagtcaatgggcgtcagctcatct
gcataggtcttcacacgaatcctagaattgaaccgcagagacagcaggtt
gtagacaatctcaaaacggttctgccgagttgggacatccactgccgtca
agtcagccaaggatttgaattgtgcattggtgtgatccctgagaaaagtc
agcgttgggatgactccatcgtgatggatacagatttctaacttatcaag
gcaggacacctgaacttgttggacatacttgggtaagatttcagccacat
actctgcaaatgctgagagctgcttgtgggtcacatcactccagggtctg
acagtggggcgcttgtcagccgccgtgctctcccttcttacgtgctgcca
cagcacagagggtcgcccagcccccctgcctacggaagcggcccccaaga
gcccacgacaacagaccctggctgtagccgccgccatgttccttagtgtc
ccactttagctttttattttgcatttcatgttaaatgaaaagttacaaaa
ccaggagtgccatcatccagtgctccagattcatgtctgttgctgtctca
cacaggcgcgcgcgcgcgcgcgcacacacacacacacacacacacacaca
cacagacactcagacacactcacaaaggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_58206376_58207436
seq2: B6Ng01-196I07.g_68_948

seq1  GAATTCTTGTGCCAGCTCCACTGGTTCAGCCACTACCCGCTTTACCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGCCAGCTCCACTGGTTCAGCCACTACCCGCTTTACCTCAT  50

seq1  CGTCGTAACGAAGCTCAACATAGCCAGCGAGGGGAAAGTCTTTCCGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGTAACGAAGCTCAACATAGCCAGCGAGGGGAAAGTCTTTCCGGAAA  100

seq1  GGATGTCCCTCGAAGCCATAATCTGTCAGGATCCTTCTTAAATCAGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCCCTCGAAGCCATAATCTGTCAGGATCCTTCTTAAATCAGGGTG  150

seq1  GTTAAAAAAGAAAACTCCAAACATGTCCCAGACCTCCCTCTCATACCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAAGAAAACTCCAAACATGTCCCAGACCTCCCTCTCATACCAAT  200

seq1  TGGCCGCGATGTGCACAGACACTATAGAGTCAATGGGCGTCAGCTCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCGATGTGCACAGACACTATAGAGTCAATGGGCGTCAGCTCATCT  250

seq1  GCATAGGTCTTCACACGAATCCTAGAATTGAACCGCAGAGACAGCAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTCTTCACACGAATCCTAGAATTGAACCGCAGAGACAGCAGGTT  300

seq1  GTAGACAATCTCAAAACGGTTCTGCCGAGTTGGGACATCCACTGCCGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAATCTCAAAACGGTTCTGCCGAGTTGGGACATCCACTGCCGTCA  350

seq1  AGTCAGCCAAGGATTTGAATTGTGCATTGGTGTGATCCCTGAGAAAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCAAGGATTTGAATTGTGCATTGGTGTGATCCCTGAGAAAAGTC  400

seq1  AGCGTTGGGATGACTCCATCGTGATGGATACAGATTTCTAACTTATCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTGGGATGACTCCATCGTGATGGATACAGATTTCTAACTTATCAAG  450

seq1  GCAGGACACCTGAACTTGTTGGACATACTTGGGTAAGATTTCAGCCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACACCTGAACTTGTTGGACATACTTGGGTAAGATTTCAGCCACAT  500

seq1  ACTCTGCAAATGCTGAGAGCTGCTTGTGGGTCACATCACTCCAGGGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCAAATGCTGAGAGCTGCTTGTGGGTCACATCACTCCAGGGTCTG  550

seq1  ACAGTGGGGCGCTTGTCAGCCGCCGTGCTCTCCCTTCTTACGTGCTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGGCGCTTGTCAGCCGCCGTGCTCTCCCTTCTTACGTGCTGCCA  600

seq1  CAGCACAGAGGGTCGCCCAGCCCCCCTGCCTACGGAAGCGGCCCCCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGAGGGTCGCCCAGCCCCCCTGCCTACGGAAGCGGCCCCCAAGA  650

seq1  GCCCACGACAACAGACCCTGGCTGTAGCCGCCGCCATGTTCCTTAGTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACGACAACAGACCCTGGCTGTAGCCGCCGCCATGTTCCTTAGTGTC  700

seq1  CCACTTTAGCTTTTTATTTTGCATTTCATGTTAAATGAAAAGTTACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTAGCTTTTTATTTTGCATTTCATGTTAAATGAAAAGTTACAAAA  750

seq1  CCAGGAGTGCCATCATCCAGTGCTCCAGATTCATGTCTGTTGCTGTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGTGCCATCATCCAGTGCTCCAGATTCATGTCTGTTGCTGTCTCA  800

seq1  CACAGGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACACA  850

seq1  CACAGACACACAGACACACACACAAAGGCACACACACAGACACACACACA  900
      ||||||||| ||||||||| |||||||||||                   
seq2  CACAGACACTCAGACACACTCACAAAGGCAC-------------------  881

seq1  CACATATATATATATATATATATATATATATACAGACATGTACACACACA  950
                                                        
seq2  --------------------------------------------------  881

seq1  GACACACACACAGGCACACACACACACAGACACACACACAGGCACACACA  1000
                                                        
seq2  --------------------------------------------------  881

seq1  CAGACACAGACACACACAGACACAGACACACAGACATACACACAGACACT  1050
                                                        
seq2  --------------------------------------------------  881

seq1  CACAAAGGCAC  1061
                 
seq2  -----------  881