BAC Information

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BAC

Clone NameB6Ng01-198H16
Chromosome11 (Build37)
Map Location 7,214,341 - 7,364,744
singlet/doubletdoublet
Overlap genenone
Upstream geneOgdh, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198H16.bB6Ng01-198H16.g
ACCGA020064GA020065
length1,1591,146
definitionB6Ng01-198H16.b B6Ng01-198H16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,214,341 - 7,215,250)(7,363,610 - 7,364,744)
sequence
gaattctttaagggatttttgtgtttcctctttaagggcttctacctgtt
tagttgtgttctcctgtatttctttaagggaagtagtaatgtccttctta
agatcctctaccagcattatgagatactattttaaaacccgattgttgct
tttctagtgtgttgggatatccaggactggctgtggtgggactactgggt
tctgatgatgctgagtgttcttggtttctgttggtaagattcttgtgttt
gccttttgccatctggtattctctggtgttagatgttcttgctgtctctg
gctggatcttgttcctcctgtgattccataagcctatgtcagcactcctg
ggagatcagctctctcctggcaaggccagtgcccagagggctgcagaact
gccccatatcctgggtgcacatgcaggcttgaagaaacctgtcccagctg
ctctgctgcttctggagcctgtgcactcctgagtagaccttcattagaga
gacactggagagaaaatggtgatttcacctgagtcccagggtcagagcac
tccctggaggcaagctgtcctctggcagggaaggtacaccgaggactgaa
gattatctccacctcctggctgcagatgtaggcccacaggaccctgtccc
agaagctctcttgcttctgcagcctgtgcactcctgagtagacccgcctt
agatagtcaactgagagaaaaaaaaatcccctccaactatccttaacttc
tgtctttcttttcctaatgagatatatctccttttcccatagtccctcgg
ccccaggttagttgactctgtaggtcttctttgtagaaattcttgatcac
ttctgacttgtcaatttctatttccccactctttctacaagactcccctg
gctaatacctgatgttttggctgcaggtcttcttgcatctgttctccatt
cctgctgggtgaagccctctcgggagactagtttattgctaggtttcctg
ttctgcaagccatagcagaagtgtcatttaatagtgttaggggtttgggc
tcttctcaccaggggatggttccagtaaggggcagtccattggttagccc
attctcaaggtctctgattcgcttggtatcacttgagaattggctttttg
gacctactg
gaattctttttaaatgtagccttccccaggaggtgaggggagaatatctt
ctcaaatcaatcttcgagccaacagaatgagaaatgggtcacacagagac
agggaggaagcattgtggaggattgaatgagaaatattatcccccacatc
tgtctgggacatccgagcacttgttctccagttattagcattgattgaca
acgtttaggtgctgtagccttgttgaaggaagaatgccactgagggcaga
cttttgagactaagtgtctctgccatttacagttttctctctatgctctg
tgcatgtggttgaagaatgagctccagcttcctgggccagcagtcatgcc
tgctctctctactacatttcaccatgatggatattgcccctctgtaactg
taagcccaaatcaactctttcatctataagttcccttggtcatggtgtaa
agtaactaatacaggcacagagcagtagctggtgctagtagtaggacaca
agctggcatgggataatggccagagtgtccaaacacaaagaaggaaagag
aagcagaaggctcagatctgcactcaggtgaatagaactcatgttctgac
agaacaagacaaggatgtagctgaaagaagaccccagtagaaatatttga
gtcttaggagatgcctacacaataacttgcggtgaggggttgtcgtactt
agggttttactgctgtgacaccagggaccacagcaactcttataaagaca
acattttaattttggcaggcttaaggctttcaagagtttcagtctattat
catcaagacgggagcatggcagcatctaggcaggcatggaaacaagaggt
gctgtgagtttcacatcttcatctaaaggctgctaggagaagactggctt
ccaggaagctaggatggggtttctaaagcccacaccaaagtgacacactt
tatccaacaaggacacatgttcctaatagtgccacctccctggactaagc
atatacaacccatccagtggttcatgggccttctggcatattagcactaa
aggccctgatggtcatagtgtcatttcagatttctttggagttccatggc
ccacttcaacggtccttcctcaactgggcctggccacatctgaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7214341_7215250
seq2: B6Ng01-198H16.b_265_1205

seq1  TCTTGGTTTCTGTTGGTAAGATTCTTGTGTTTGCCTTTTGCCATCTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTCTGTTGGTAAGATTCTTGTGTTTGCCTTTTGCCATCTGGTA  50

seq1  TTCTCTGGTGTTAGATGTTCTTGCTGTCTCTGGCTGGATCTTGTTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTGTTAGATGTTCTTGCTGTCTCTGGCTGGATCTTGTTCCTCC  100

seq1  TGTGATTCCATAAGCCTATGTCAGCACTCCTGGGAGATCAGCTCTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCCATAAGCCTATGTCAGCACTCCTGGGAGATCAGCTCTCTCCT  150

seq1  GGCAAGGCCAGTGCCCAGAGGGCTGCAGAACTGCCCCATATCCTGGGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGCCAGTGCCCAGAGGGCTGCAGAACTGCCCCATATCCTGGGTGC  200

seq1  ACATGCAGGCTTGAAGAAACCTGTCCCAGCTGCTCTGCTGCTTCTGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGGCTTGAAGAAACCTGTCCCAGCTGCTCTGCTGCTTCTGGAGC  250

seq1  CTGTGCACTCCTGAGTAGACCTTCATTAGAGAGACACTGGAGAGAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACTCCTGAGTAGACCTTCATTAGAGAGACACTGGAGAGAAAATG  300

seq1  GTGATTTCACCTGAGTCCCAGGGTCAGAGCACTCCCTGGAGGCAAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCACCTGAGTCCCAGGGTCAGAGCACTCCCTGGAGGCAAGCTGT  350

seq1  CCTCTGGCAGGGAAGGTACACCGAGGACTGAAGATTATCTCCACCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCAGGGAAGGTACACCGAGGACTGAAGATTATCTCCACCTCCTG  400

seq1  GCTGCAGATGTAGGCCCACAGGACCCTGTCCCAGAAGCTCTCTTGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGATGTAGGCCCACAGGACCCTGTCCCAGAAGCTCTCTTGCTTCT  450

seq1  GCAGCCTGTGCACTCCTGAGTAGACCCGCCTTAGATAGTCAACTGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTGCACTCCTGAGTAGACCCGCCTTAGATAGTCAACTGAGAGA  500

seq1  AAAAAAAATCCCCTCCAACTATCCTTAACTTCTGTC-TTCTTTTCCTAAT  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAAAAATCCCCTCCAACTATCCTTAACTTCTGTCTTTCTTTTCCTAAT  550

seq1  GAGATATATCTCCTTTTCCCATAGTCCCTCGGCCCCAGGTTAGTTGACTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATATCTCCTTTTCCCATAGTCCCTCGGCCCCAGGTTAGTTGACTC  600

seq1  TGTAGGTCTTC-TTGTAG-AATTCTTGATCAC-TCTGACTTGTTCAATTC  646
      ||||||||||| |||||| ||||||||||||| ||||||||||  | |||
seq2  TGTAGGTCTTCTTTGTAGAAATTCTTGATCACTTCTGACTTGTCAATTTC  650

seq1  TA-TTCCCCACTC-TTCTACAAGACTCCCCTGGCT-ATACCTGATG-TTT  692
      || |||||||||| ||||||||||||||||||||| |||||||||| |||
seq2  TATTTCCCCACTCTTTCTACAAGACTCCCCTGGCTAATACCTGATGTTTT  700

seq1  GGCTGCAGGTCT--CTGCATCTG-TCTCCA-TCCTGCTGGGTGAAG-CCT  737
      ||||||||||||   |||||||| |||||| ||||||||||||||| |||
seq2  GGCTGCAGGTCTTCTTGCATCTGTTCTCCATTCCTGCTGGGTGAAGCCCT  750

seq1  CTCGGGAGAC-AGTT--ATGCTAGG-TTCCTG-TCTGCAAG-CATAGCAG  781
      |||||||||| ||||   ||||||| |||||| |||||||| ||||||||
seq2  CTCGGGAGACTAGTTTATTGCTAGGTTTCCTGTTCTGCAAGCCATAGCAG  800

seq1  -AGTGTCA-TTAATAGTGTTAGGG--TTTGGCTC-TCTCA-CAGGGGATG  825
       ||||||| |||||||||||||||  || ||||| ||||| |||||||||
seq2  AAGTGTCATTTAATAGTGTTAGGGGTTTGGGCTCTTCTCACCAGGGGATG  850

seq1  GGTCAAGT-AGGGGCAGT-CATTGGTTAG-CCATTCTCTAAAGT-TCTGA  871
      | || ||| ||||||||| |||||||||| |||||||| || || |||||
seq2  GTTCCAGTAAGGGGCAGTCCATTGGTTAGCCCATTCTC-AAGGTCTCTGA  899

seq1  TTCGCTT-GTATCACTTGAGGATT-GCTTTTT-GACCTACTG  910
      ||||||| |||||||||||| ||| ||||||| |||||||||
seq2  TTCGCTTGGTATCACTTGAGAATTGGCTTTTTGGACCTACTG  941

seq1: chr11_7363610_7364744
seq2: B6Ng01-198H16.g_65_1210 (reverse)

seq1  TCTTCAAATGT-GCCAGG-CCAGTTGAGGAAGGAACCCTTTGAGTGGCCC  48
      |||||| |||| |||||| |||||||||||||| ||| ||  ||||| ||
seq2  TCTTCAGATGTGGCCAGGCCCAGTTGAGGAAGG-ACCGTTGAAGTGGGCC  49

seq1  AAGGGACT-CAAAGAAATCTG-AATGACACTATGACCATTCAGG--CTTT  94
      | || ||| |||||||||||| |||||||||||||||| |||||  ||||
seq2  ATGGAACTCCAAAGAAATCTGAAATGACACTATGACCA-TCAGGGCCTTT  98

seq1  AGTGCT-ATATGCCCAGAGGGCCATG-ACCACTGGGATGGTTTGTATATG  142
      |||||| |||||||   ||| ||||| |||||| |||||| |||||||||
seq2  AGTGCTAATATGCCAGAAGGCCCATGAACCACT-GGATGGGTTGTATATG  147

seq1  CTTAGTTCAGGGA-GTGGCACTATTAGG-ACATGTGTCCTTGTTGGAT-A  189
      |||||| |||||| |||||||||||||| ||||||||||||||||||| |
seq2  CTTAGTCCAGGGAGGTGGCACTATTAGGAACATGTGTCCTTGTTGGATAA  197

seq1  AGTGTGTCACTTTGGGTGTGGGCTTTAAGAACCCCATCCTAGCTTCCTGG  239
      ||||||||||||| |||||||||||||  |||||||||||||||||||||
seq2  AGTGTGTCACTTT-GGTGTGGGCTTTAGAAACCCCATCCTAGCTTCCTGG  246

seq1  AAGCCAGTCTTCTCCTAGCAGCCTTTAGATGAAGATGTTGAACTCACAGC  289
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  AAGCCAGTCTTCTCCTAGCAGCCTTTAGATGAAGATGTGAAACTCACAGC  296

seq1  ACCTCTTG-TTCCATGCCTGCCTAGATGCTGCCATGCTCCCGTCTTGATG  338
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTGTTTCCATGCCTGCCTAGATGCTGCCATGCTCCCGTCTTGATG  346

seq1  ATAATAGACTGAAACTCTTG-AAGCCTTAAGCCTGCCAAAATT-AAATGT  386
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  ATAATAGACTGAAACTCTTGAAAGCCTTAAGCCTGCCAAAATTAAAATGT  396

seq1  TGTCTTTATAAGAGTTGCTGTGGT-CCTGGTGTCACAGCAGTAAAACCCT  435
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTCTTTATAAGAGTTGCTGTGGTCCCTGGTGTCACAGCAGTAAAACCCT  446

seq1  AAGTACGACAACCCCTCACCGCAAGTTATTGTGTAGGCATCTCCTAAGAC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACGACAACCCCTCACCGCAAGTTATTGTGTAGGCATCTCCTAAGAC  496

seq1  TCAAATATTTCTACTGGGGTCTTCTTTCAGCTACATCCTTGTCTTGTTCT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTTCTACTGGGGTCTTCTTTCAGCTACATCCTTGTCTTGTTCT  546

seq1  GTCAGAACATGAGTTCTATTCACCTGAGTGCAGATCTGAGCCTTCTGCTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAACATGAGTTCTATTCACCTGAGTGCAGATCTGAGCCTTCTGCTT  596

seq1  CTCTTTCCTTCTTTGTGTTTGGACACTCTGGCCATTATCCCATGCCAGCT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCTTCTTTGTGTTTGGACACTCTGGCCATTATCCCATGCCAGCT  646

seq1  TGTGTCCTACTACTAGCACCAGCTACTGCTCTGTGCCTGTATTAGTTACT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTACTACTAGCACCAGCTACTGCTCTGTGCCTGTATTAGTTACT  696

seq1  TTACACCATGACCAAGGGAACTTATAGATGAAAGAGTTGATTTGGGCTTA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCATGACCAAGGGAACTTATAGATGAAAGAGTTGATTTGGGCTTA  746

seq1  CAGTTACAGAGGGGCAATATCCATCATGGTGAAATGTAGTAGAGAGAGCA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACAGAGGGGCAATATCCATCATGGTGAAATGTAGTAGAGAGAGCA  796

seq1  GGCATGACTGCTGGCCCAGGAAGCTGGAGCTCATTCTTCAACCACATGCA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGACTGCTGGCCCAGGAAGCTGGAGCTCATTCTTCAACCACATGCA  846

seq1  CAGAGCATAGAGAGAAAACTGTAAATGGCAGAGACACTTAGTCTCAAAAG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATAGAGAGAAAACTGTAAATGGCAGAGACACTTAGTCTCAAAAG  896

seq1  TCTGCCCTCAGTGGCATTCTTCCTTCAACAAGGCTACAGCACCTAAACGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTCAGTGGCATTCTTCCTTCAACAAGGCTACAGCACCTAAACGT  946

seq1  TGTCAATCAATGCTAATAACTGGAGAACAAGTGCTCGGATGTCCCAGACA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATCAATGCTAATAACTGGAGAACAAGTGCTCGGATGTCCCAGACA  996

seq1  GATGTGGGGGATAATATTTCTCATTCAATCCTCCACAATGCTTCCTCCCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGGGGATAATATTTCTCATTCAATCCTCCACAATGCTTCCTCCCT  1046

seq1  GTCTCTGTGTGACCCATTTCTCATTCTGTTGGCTCGAAGATTGATTTGAG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTGTGACCCATTTCTCATTCTGTTGGCTCGAAGATTGATTTGAG  1096

seq1  AAGATATTCTCCCCTCACCTCCTGGGGAAGGCTACATTTAAAAAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCTCCCCTCACCTCCTGGGGAAGGCTACATTTAAAAAGAATTC  1146