BAC Information

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BAC

Clone NameB6Ng01-198L09
Chromosome11 (Build37)
Map Location 36,352,119 - 36,440,370
singlet/doubletdoublet
Overlap geneOdz2
Upstream geneSlit3, Pank3, LOC666733, AI595406, Rars, Wwc1, LOC636532
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198L09.bB6Ng01-198L09.g
ACCGA020238GA020239
length853142
definitionB6Ng01-198L09.b B6Ng01-198L09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,439,506 - 36,440,370)(36,352,119 - 36,352,260)
sequence
gaattcatcaccagctgactttctgggaatgacagcatatatttgataat
ttgcttaccaaacccttagctacattatttatctgcacccatagagcata
atagagctataaattaggtgctccttgcatttcaacccatcttgactact
ggagaaactgcttagcatctttcccgggtctacagacactgttccctcac
ttacagttattccttgaggccgaccacttctttgactcatgaaaactgtc
acacataatctttgcatagaggttgggctccaacttctgcatcttcatca
gctacatgcttctactggttcaaatttgctcttttgaaaaggcagagatg
aggactaaagttgattttgaatccagcctctacaactttttattaatagc
agtgcatttaattctgtgtcctgtgatgtggctgtatacaatgcatgact
actttctggtggtagcctctcctcctattcacatttattctttagtccca
tggtaaccttaattcttttattaacacataccctttcaccggagccatcc
aaaaatgctatttttttttcttaaaatattgcttatcaagatttttagag
actctactcacagcaatgcttacaaggtatgaaatatttactgatttgga
tgataattccatgtgcctgtgtacctcagataggaataaacaaagtagag
gcaaaaataatcataggcagataagaaaagtctttcaggaccatccgtta
ttttatgctttctaacaaattaccttaaacctgtgggttaaacaacatag
catttcacatgcaccacctattttgtgcactgggatttgaatagaatcat
ttg
actgtgtatttgtggttgcatgtgtatacaggtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgcgcgcgcgcacgcacgcacgcatgcgtgcacacaca
tgcagatttgaactgaattcaagagaatatgttaatgatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36439506_36440370
seq2: B6Ng01-198L09.b_46_898 (reverse)

seq1  CAAATGA-TCTATTTCCAAATTCCCAGTGCACAAAATTAAGTGTGTGCAT  49
      ||||||| ||||||  |||| ||||||||||||||| || ||| ||||| 
seq2  CAAATGATTCTATT--CAAA-TCCCAGTGCACAAAA-TAGGTG-GTGCA-  44

seq1  TGTGAAATGCTTATGTTGTTTTAAACCACAAGGTTTAAGGTAATTTGTTA  99
      |||||||||| ||||||| ||||| |||| ||||||||||||||||||||
seq2  TGTGAAATGC-TATGTTG-TTTAACCCAC-AGGTTTAAGGTAATTTGTTA  91

seq1  GAAAGCCATAGATAACGGATGGTCCTGAAAAGACTTTTCTTATCTGGCCT  149
      ||||||   | |||||||||||||||| ||||||||||||||||| ||||
seq2  GAAAGCATAAAATAACGGATGGTCCTG-AAAGACTTTTCTTATCT-GCCT  139

seq1  ATGATTATTTTTGCCTCTACCTTTGTTTATTCCTTATCTGAGGTACACAG  199
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  ATGATTATTTTTGCCTCTA-CTTTGTTTATTCC-TATCTGAGGTACACAG  187

seq1  GCACATGGAATTATCATCCAAATCAGTAAATATTTCATACCTTGTAAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGAATTATCATCCAAATCAGTAAATATTTCATACCTTGTAAGCA  237

seq1  TTGCTGTGAGTAGAGTCTCTAAAAATCTTGATAAGCAATATTTTAAGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGAGTAGAGTCTCTAAAAATCTTGATAAGCAATATTTTAAGAAA  287

seq1  AAAAAATAGCATTTTTGGATGGCTCCGGTGAAAGGGTATGTGTTAATAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGCATTTTTGGATGGCTCCGGTGAAAGGGTATGTGTTAATAAA  337

seq1  AGAATTAAGGTTACCATGGGACTAAAGAATAAATGTGAATAGGAGGAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAAGGTTACCATGGGACTAAAGAATAAATGTGAATAGGAGGAGAG  387

seq1  GCTACCACCAGAAAGTAGTCATGCATTGTATACAGCCACATCACAGGACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCACCAGAAAGTAGTCATGCATTGTATACAGCCACATCACAGGACA  437

seq1  CAGAATTAAATGCACTGCTATTAATAAAAAGTTGTAGAGGCTGGATTCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAAATGCACTGCTATTAATAAAAAGTTGTAGAGGCTGGATTCAA  487

seq1  AATCAACTTTAGTCCTCATCTCTGCCTTTTCAAAAGAGCAAATTTGAACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTTTAGTCCTCATCTCTGCCTTTTCAAAAGAGCAAATTTGAACC  537

seq1  AGTAGAAGCATGTAGCTGATGAAGATGCAGAAGTTGGAGCCCAACCTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGCATGTAGCTGATGAAGATGCAGAAGTTGGAGCCCAACCTCTA  587

seq1  TGCAAAGATTATGTGTGACAGTTTTCATGAGTCAAAGAAGTGGTCGGCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGATTATGTGTGACAGTTTTCATGAGTCAAAGAAGTGGTCGGCCT  637

seq1  CAAGGAATAACTGTAAGTGAGGGAACAGTGTCTGTAGACCCGGGAAAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATAACTGTAAGTGAGGGAACAGTGTCTGTAGACCCGGGAAAGAT  687

seq1  GCTAAGCAGTTTCTCCAGTAGTCAAGATGGGTTGAAATGCAAGGAGCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCAGTTTCTCCAGTAGTCAAGATGGGTTGAAATGCAAGGAGCACC  737

seq1  TAATTTATAGCTCTATTATGCTCTATGGGTGCAGATAAATAATGTAGCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATAGCTCTATTATGCTCTATGGGTGCAGATAAATAATGTAGCTA  787

seq1  AGGGTTTGGTAAGCAAATTATCAAATATATGCTGTCATTCCCAGAAAGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGGTAAGCAAATTATCAAATATATGCTGTCATTCCCAGAAAGTC  837

seq1  AGCTGGTGATGAATTC  865
      ||||||||||||||||
seq2  AGCTGGTGATGAATTC  853

seq1: chr11_36352119_36352260
seq2: B6Ng01-198L09.g_69_210

seq1  ACTGTGTATTTGTGGTTGCATGTGTATACAGGTGTGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTATTTGTGGTTGCATGTGTATACAGGTGTGTGTGTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGCGCGCGCGCACGCACGCACGCATGCGTGCACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGCGCGCGCGCACGCACGCACGCATGCGTGCACACACA  100

seq1  TGCAGATTTGAACTGAATTCAAGAGAATATGTTAATGATGCC  142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATTTGAACTGAATTCAAGAGAATATGTTAATGATGCC  142