BAC Information

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BAC

Clone NameB6Ng01-199D04
Chromosome11 (Build37)
Map Location 57,357,097 - 57,496,254
singlet/doubletdoublet
Overlap geneGalnt10
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneSap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199D04.bB6Ng01-199D04.g
ACCGA020595GA020596
length2001,075
definitionB6Ng01-199D04.b B6Ng01-199D04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,496,055 - 57,496,254)(57,357,097 - 57,358,154)
sequence
gaattcctgcagttagtccatgcaacagatgctgccattattctgatttt
acacccgagagtgttgatgaagtcacttgtccagagtcacagctggaggg
acaggctgggggtgtgcacacagcagagtctggggtctggctaaccttgc
tggtctctctcagtcaaagcagactcacccaagagacagtggggggggga

gaattcatggtaaagcctgaggttccctgagaaactacagtgggttagta
cagtcacaagctctgggggtgctgcagtaactataatcaatgagttagta
taatcagagatccagagggctatagtgattacaagccaatgattacagtt
agtataaccagagttctagtgagcagtatcatgactgggatcacaggttg
atagactcccaagctctgggttgggggtgttatcatgtatttaataggac
tgctcaactgattaggaaagtcttattcttcttatatttgtgcttgtttg
ctttggttctggtctggtttttccagacaggatttctctatgtagccatg
gctgtcctgaaactctatagaccaggctagtctctaactcacagagatcc
accttcttctgtcttctgagtgctgggattaaaggtatgcatcaccatgt
cctgtgtcctttttaatttttaaattatttatttagtgatacctgggggc
aggggtgcatacatgccacaatgtccatgtggaggtcacaggacagcttg
aaggagtcagttctttccttcctccatggaatcctaggattgacctaggt
ttgtgaggtgtagcagcaagcacctttatccactgagccatcttgccagc
ccataaaaccctcttttgatggtcaaggaaaaccttatgagcttcaacgt
tagaaatttcctctggctacatctccaaaaagccttggcatttttgacag
aataatgtctctgcagccaggaggtgttaaccccagcatctgaaggaaag
cggttcctaacttcaacagagcagcactggcctttatcctgcaagccagg
agctttcagagaagaaactggacacttctgtttatgattgttattcactc
aacaaatatttacagatcacctggatgggacacgaagaagaatgggaacc
aaagtgcaaaagccctgctgttatctcttaccacctcatccaccgagggg
cccttcagaatcagttcttgccccttgcattgactttactcctccctggt
ctttaaaaccaggctcccaaatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57496055_57496254
seq2: B6Ng01-199D04.b_42_241 (reverse)

seq1  TCCCCCCCCCACTGTCTCTTGGGTGAGTCTGCTTTGACTGAGAGAGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCACTGTCTCTTGGGTGAGTCTGCTTTGACTGAGAGAGACCA  50

seq1  GCAAGGTTAGCCAGACCCCAGACTCTGCTGTGTGCACACCCCCAGCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTTAGCCAGACCCCAGACTCTGCTGTGTGCACACCCCCAGCCTGT  100

seq1  CCCTCCAGCTGTGACTCTGGACAAGTGACTTCATCAACACTCTCGGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAGCTGTGACTCTGGACAAGTGACTTCATCAACACTCTCGGGTGT  150

seq1  AAAATCAGAATAATGGCAGCATCTGTTGCATGGACTAACTGCAGGAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGAATAATGGCAGCATCTGTTGCATGGACTAACTGCAGGAATTC  200

seq1: chr11_57357097_57358154
seq2: B6Ng01-199D04.g_65_1139

seq1  GAATTCATGGTAAAGCCTGAGGTTCCCTGAGAAACTACAGTGGGTTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTAAAGCCTGAGGTTCCCTGAGAAACTACAGTGGGTTAGTA  50

seq1  CAGTCACAAGCTCTGGGGGTGCTGCAGTAACTATAATCAATGAGTTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAAGCTCTGGGGGTGCTGCAGTAACTATAATCAATGAGTTAGTA  100

seq1  TAATCAGAGATCCAGAGGGCTATAGTGATTACAAGCCAATGATTACAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGAGATCCAGAGGGCTATAGTGATTACAAGCCAATGATTACAGTT  150

seq1  AGTATAACCAGAGTTCTAGTGAGCAGTATCATGACTGGGATCACAGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAACCAGAGTTCTAGTGAGCAGTATCATGACTGGGATCACAGGTTG  200

seq1  ATAGACTCCCAAGCTCTGGGTTGGGGGTGTTATCATGTATTTAATAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTCCCAAGCTCTGGGTTGGGGGTGTTATCATGTATTTAATAGGAC  250

seq1  TGCTCAACTGATTAGGAAAGTCTTATTCTTCTTATATTTGTGCTTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACTGATTAGGAAAGTCTTATTCTTCTTATATTTGTGCTTGTTTG  300

seq1  CTTTGGTTCTGGTCTGGTTTTTCCAGACAGGATTTCTCTATGTAGCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTCTGGTCTGGTTTTTCCAGACAGGATTTCTCTATGTAGCCATG  350

seq1  GCTGTCCTGAAACTCTATAGACCAGGCTAGTCTCTAACTCACAGAGATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGAAACTCTATAGACCAGGCTAGTCTCTAACTCACAGAGATCC  400

seq1  ACCTTCTTCTGTCTTCTGAGTGCTGGGATTAAAGGTATGCATCACCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTCTGTCTTCTGAGTGCTGGGATTAAAGGTATGCATCACCATGT  450

seq1  CCTGTGTCCTTTTTAATTTTTAAATTATTTATTTAGTGATACCTGGGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCCTTTTTAATTTTTAAATTATTTATTTAGTGATACCTGGGGGC  500

seq1  AGGGGTGCATACATGCCACAATGTCCATGTGGAGGTCACAGGACAGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCATACATGCCACAATGTCCATGTGGAGGTCACAGGACAGCTTG  550

seq1  AAGGAGTCAGTTCTTTCCTTCCTCCATGGAATCCTAGGATTGACCTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTCAGTTCTTTCCTTCCTCCATGGAATCCTAGGATTGACCTAGGT  600

seq1  TTGTGAGGTGTAGCAGCAAGCACCTTTATCCACTGAGCCATCTTGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGTGTAGCAGCAAGCACCTTTATCCACTGAGCCATCTTGCCAGC  650

seq1  CCATAAAACCCTCTTTTGATGGTCAAGGAAAACCTTATGAGCTTCAACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAACCCTCTTTTGATGGTCAAGGAAAACCTTATGAGCTTCAACGT  700

seq1  TAGAAATTTCCTCTGGCTACATCTCCAAAAAGCCTTGGCATTTTTGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTCCTCTGGCTACATCTCCAAAAAGCCTTGGCATTTTTGACAG  750

seq1  AATAATGTCTCTGCAGCCAGGAGGTGTTAACCCCAGCATCTGAAGGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTCTCTGCAGCCAGGAGGTGTTAACCCCAGCATCTGAAGGAAAG  800

seq1  CGGTTCC-AACTTCAACAGAGCAGCACTGGCCTTTATCCTGCAAGCCAGG  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCCTAACTTCAACAGAGCAGCACTGGCCTTTATCCTGCAAGCCAGG  850

seq1  AGC-TTCAGAGAAGAAACTGGACACTTCTG-TTATGATTGTTATTCACTC  897
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGCTTTCAGAGAAGAAACTGGACACTTCTGTTTATGATTGTTATTCACTC  900

seq1  AACAAATATTTACAGATCACCT-GAT-GGACACGAAGAAGAATGGGAACC  945
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  AACAAATATTTACAGATCACCTGGATGGGACACGAAGAAGAATGGGAACC  950

seq1  AAAGTGCAAA--GCCTGCTGTTATCTC-TACCACCTCATCCACCGAGTG-  991
      ||||||||||   |||||||||||||| ||||||||||||||||||| | 
seq2  AAAGTGCAAAAGCCCTGCTGTTATCTCTTACCACCTCATCCACCGAGGGG  1000

seq1  -CCCTCAG-ATCAGTCCTTG-CTCTTGC-TTGACTTTACT-CTCCCT-GT  1035
       || |||| |||||| |||| | ||||| ||||||||||| |||||| ||
seq2  CCCTTCAGAATCAGTTCTTGCCCCTTGCATTGACTTTACTCCTCCCTGGT  1050

seq1  CTTTAAAACCA-GCT-CCAAATCAC  1058
      ||||||||||| ||| |||||||||
seq2  CTTTAAAACCAGGCTCCCAAATCAC  1075