BAC Information

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BAC

Clone NameB6Ng01-200O03
Chromosome11 (Build37)
Map Location 11,141,170 - 11,142,315
singlet/doubletsinglet
Overlap geneVwc2
Upstream genenone
Downstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10, Cobl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200O03.bB6Ng01-200O03.g
ACCGA021814GA021815
length1,153899
definitionB6Ng01-200O03.b B6Ng01-200O03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgtggcagacacagtatccgtataaattctgttctatgtat
ttagttattttcttaggattagttcctagaagtacaatctccaagccaca
acaaattctcaacatcttcagagcttgatacatattgtcaagtagtttcc
cagaaatatatagatacacatccacagtcgaaaataagtatgccactgaa
ttacaccaccattctcttctgtcttttggcaaccaactacttactggacc
tgaacagtctctaaggacacagtggttagaaactggcatccttccttagg
gatcttagaatctagtaggaggacaaattccaagaggaataacaattgca
gtgtgagccactttgtgggcacatcaaccatcccagagcactgttttggc
acttaatgtatattaatataattctcatacaattccattaagacacttta
agagtgaacaggtctaagacaaaattccaaagttgaaaattcccccaaat
ctgaaacttttgtacatcagcaggataccagaaagaaaaatcccagagca
taacatcttttttcatgtgtactatttttaaaacaatagatgagattagt
attgggccatatgtatatgagctataagcagagttctaagattatcctat
tttttgtaaatactctcaaatatgagaaagtataaactataaggtacttt
gcctttgaagtactctcaatgagagaaactcaaccctccaccactcttac
tgcacagaggaagaacaggagagatagtgggtgaagtggctggaaaagaa
caccagtactgggaaggggctctgaatgcacctagcaacaccagcactta
acaattctgctgttaccatttgatagtcatgcaaatgaatgctaagccac
ttgccatggtcaccagctctttctttctccaattcacaacactgaccctg
cattgtaaaataccctttgcatacaagtacttttactttttttattaata
gatatccctttacccatccaaaagcatgttataattcatcatatcttctg
catgactaatttgtttctagcagaaaattatcaattccagagatgcagcc
tctcctccagaacggaacgggcgcttgaatgttccttgcttgctcatgct
cta

gaattctctctctcactcttcggttgtgaagagcatctgcaacagctgtt
aacaatcatcccaagtaggctgatgagagaacataaaaggaactccacca
accctgtgaggcattggggatcctgggaaagggggtggctagttttccag
ttataaagatcagcagaggaaaatgaccagtactgaagggtttgaagttt
gggtgggtccagagtccgcccagactctgtgctctgcggttccatgtaca
cacagcggcccacctctcgacgccccgaggggtttggggttccccccagc
agctggggttgaggctgtggataagggggaggtagtggactaggccactc
aggaggcttcatagattttggaggagctgatggatttagctggtggctct
gatttgggagaagccttcaatttctcttgtaacaagagagtacaaccaca
attttgagaagcaaaacccaattttaacagtgcaaacaatccattctctt
taaaaatgaactccaaaaacattacttgctacaaagtttggctgcctgtt
cctgcacacagacacaagaaggtgtagcagccaatttcctcaaaaaagac
actaccctaaatcctatcttttataaatcgggtttctaggataagaatta
catagaaaattaccccaattcaggcgtatcttttttttttttctttccat
ttttttattaggtatttagctcatttacatttccaatgctataccaaaaa
gtcccccatacccacccaacccgcactcctctatccgcccactcccccct
ttttggccctggcgttccccctgttctggggtcatataaagtttgttgtg
tccaatggggcctcttctttccagatgaagggcccaataggacctatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11141170_11142315
seq2: B6Ng01-200O03.b_50_1202 (reverse)

seq1  TAGAGCATGAGCAAGCAGGAAACATCAAAGCGCCCTCTCC-TTCTGGAGG  49
      ||||||||||||||||| | |||||  ||||||||  ||| |||||||||
seq2  TAGAGCATGAGCAAGCAAGGAACATTCAAGCGCCCGTTCCGTTCTGGAGG  50

seq1  AGA-GCTGCATCTCTGGAA-TGATAA-TTTCTGCTAGAAACAAATTTAAG  96
      ||| ||||||||||||||| |||||| |||||||||||||||||||  ||
seq2  AGAGGCTGCATCTCTGGAATTGATAATTTTCTGCTAGAAACAAATT--AG  98

seq1  TCATGCAG-AGATATTGATGAATTTATAACATGCTTTTGGATGGGTAAA-  144
      |||||||| ||||| ||||||| |||||||||||||||||||||||||| 
seq2  TCATGCAGAAGATA-TGATGAA-TTATAACATGCTTTTGGATGGGTAAAG  146

seq1  GGATATCTAATAAT-AAAAAAGTAAAAGTACTTGTATGC-AAGGGTA-TT  191
      ||||||||| |||| |||||||||||||||||||||||| ||||||| ||
seq2  GGATATCTATTAATAAAAAAAGTAAAAGTACTTGTATGCAAAGGGTATTT  196

seq1  TACAATGCAGGGTCAGTGTTGTGAATTGGAGAA--GAAGAGCTGGTGACC  239
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  TACAATGCAGGGTCAGTGTTGTGAATTGGAGAAAGAAAGAGCTGGTGACC  246

seq1  ATGGCAAGTGGCTTAGCATTCATTTGCATGACTATCAAATGGTAACAGCA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGTGGCTTAGCATTCATTTGCATGACTATCAAATGGTAACAGCA  296

seq1  GAATTGTTAAGTGCTGGTGTTGCTAGGTGCATTCAGAGCCCCTTCCCAGT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTAAGTGCTGGTGTTGCTAGGTGCATTCAGAGCCCCTTCCCAGT  346

seq1  ACTGGTGTTCTTTTCCAGCCACTTCACCCACTATCTCTCCTGTTCTTCCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTTCTTTTCCAGCCACTTCACCCACTATCTCTCCTGTTCTTCCT  396

seq1  CTGTGCAGTAAGAGTGGTGGAGGGTTGAGTTTCTCTCATTGAGAGTACTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGTAAGAGTGGTGGAGGGTTGAGTTTCTCTCATTGAGAGTACTT  446

seq1  CAAAGGCAAAGTACCTTATAGTTTATACTTTCTCATATTTGAGAGTATTT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAAAGTACCTTATAGTTTATACTTTCTCATATTTGAGAGTATTT  496

seq1  ACAAAAAATAGGATAATCTTAGAACTCTGCTTATAGCTCATATACATATG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATAGGATAATCTTAGAACTCTGCTTATAGCTCATATACATATG  546

seq1  GCCCAATACTAATCTCATCTATTGTTTTAAAAATAGTACACATGAAAAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATACTAATCTCATCTATTGTTTTAAAAATAGTACACATGAAAAAA  596

seq1  GATGTTATGCTCTGGGATTTTTCTTTCTGGTATCCTGCTGATGTACAAAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATGCTCTGGGATTTTTCTTTCTGGTATCCTGCTGATGTACAAAA  646

seq1  GTTTCAGATTTGGGGGAATTTTCAACTTTGGAATTTTGTCTTAGACCTGT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGATTTGGGGGAATTTTCAACTTTGGAATTTTGTCTTAGACCTGT  696

seq1  TCACTCTTAAAGTGTCTTAATGGAATTGTATGAGAATTATATTAATATAC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTAAAGTGTCTTAATGGAATTGTATGAGAATTATATTAATATAC  746

seq1  ATTAAGTGCCAAAACAGTGCTCTGGGATGGTTGATGTGCCCACAAAGTGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGCCAAAACAGTGCTCTGGGATGGTTGATGTGCCCACAAAGTGG  796

seq1  CTCACACTGCAATTGTTATTCCTCTTGGAATTTGTCCTCCTACTAGATTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACTGCAATTGTTATTCCTCTTGGAATTTGTCCTCCTACTAGATTC  846

seq1  TAAGATCCCTAAGGAAGGATGCCAGTTTCTAACCACTGTGTCCTTAGAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCCCTAAGGAAGGATGCCAGTTTCTAACCACTGTGTCCTTAGAGA  896

seq1  CTGTTCAGGTCCAGTAAGTAGTTGGTTGCCAAAAGACAGAAGAGAATGGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGTCCAGTAAGTAGTTGGTTGCCAAAAGACAGAAGAGAATGGT  946

seq1  GGTGTAATTCAGTGGCATACTTATTTTCGACTGTGGATGTGTATCTATAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAATTCAGTGGCATACTTATTTTCGACTGTGGATGTGTATCTATAT  996

seq1  ATTTCTGGGAAACTACTTGACAATATGTATCAAGCTCTGAAGATGTTGAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGAAACTACTTGACAATATGTATCAAGCTCTGAAGATGTTGAG  1046

seq1  AATTTGTTGTGGCTTGGAGATTGTACTTCTAGGAACTAATCCTAAGAAAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTGTGGCTTGGAGATTGTACTTCTAGGAACTAATCCTAAGAAAA  1096

seq1  TAACTAAATACATAGAACAGAATTTATACGGATACTGTGTCTGCCACATA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAATACATAGAACAGAATTTATACGGATACTGTGTCTGCCACATA  1146

seq1  AGAATTC  1146
      |||||||
seq2  AGAATTC  1153


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