BAC Information

Click to search

BAC

Clone NameB6Ng01-201D13
Chromosome11 (Build37)
Map Location 92,230,779 - 92,373,769
singlet/doubletdoublet
Overlap genenone
Upstream geneEG664976, Kif2b
Downstream geneLOC382545, LOC100039286, Car10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201D13.bB6Ng01-201D13.g
ACCGA022059GA022060
length780893
definitionB6Ng01-201D13.b B6Ng01-201D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,230,779 - 92,231,558)(92,372,877 - 92,373,769)
sequence
gaattcaagaacggcaatttgagattgccatagcttgccatagcttgagt
tattactggttacccagtcctattgtacaagaatgttcaaatattatcct
gtgggaagcattgcttttgagcttacatttgtatgagtcatatcagaggc
ataagcaacatcacagtcaagtcacaaaatatttacatcacacctggaaa
tttccttatttaattattagttcttttccttttccacaggaatatctggt
agtctcaagttttaaccatataagaaaaagaaactgaacccaaaatatac
agcacacacaccatggtcctgtttacctatatttaaactaccgtacatca
tacttctctaaatttgccccgtcttcattgatttttgagatcaatgtagt
tttccctctttgggatttggtatgattctggtaagtacaaaggggcctct
tgagtaaaacatgaatgacattggttatattacgtttcgatatgagttat
ggatatgactacacagcaatattcaatgcttgcacattcattgatttcca
taattaccacttataattttctatgttttaaacaaataaataaaaaacaa
cacttaacacttcctgaggaaaaatatacttgcagaaaattccttagttg
tattaaaaggtttactacattgtgaacaagtgctgtgctgttttctcttc
atagatagatagatagatagagagagagagagagagagagagagagagag
agagagagagagagagatagatagatagat

gaattctcctcttggatgaagatcagcacatccacaagaaataagttaaa
gaaaggggaaatcaaattcacatgactatcagacacaataaggtagattc
tgcttatggtgctgaatgctgaaggagctgtatactgaagagactacacg
tgttgtggagaacttaggaataaatatcgaaggtcagtaatgtagctcaa
tgaagaatgtaatcctgacatccaaaaggcccaaggtttgatgtccagaa
ctacaaactaagtaaacaaatacgtaaagatgttaaacatatttttattc
ctaaacaaaccaaaccctcaaagagtcccagttatgagatcaccgttatg
aatggatgattacgaagtcagtaactcttggaacaagagttaatatatat
tcaacactcgagaaatcccactgcattctctataattataactgatgctt
cggaagcatcagcaatgttagacttcctatgctctgtgtgaacttcattt
cctggccttgttattatctttactcgtggagcacaaacctggaattattc
attgaaaatcactggagcctttaacttacagttttttatctacttaccca
gagctgcaactatccaaactttgctctcagttaccccttcgtgaaggtgc
aagagcaccaggtgaaagcaaaaggaaacgttagaattatatctctggga
ttcctggcctgcaacctcttcatctgtacatttttatgatctatttcttc
tttgatggtatcaggatattcttaggtcgaaaatttctagctgtttgcct
tgggcaggagggccaaaagtaattattttgtcgcctcatcaagctttctg
tatcctctttgtgctgctagaagatagaataaagtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92230779_92231558
seq2: B6Ng01-201D13.b_46_825

seq1  GAATTCAAGAACGGCAATTTGAGATTGCCATAGCTTGCCATAGCTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACGGCAATTTGAGATTGCCATAGCTTGCCATAGCTTGAGT  50

seq1  TATTACTGGTTACCCAGTCCTATTGTACAAGAATGTTCAAATATTATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGGTTACCCAGTCCTATTGTACAAGAATGTTCAAATATTATCCT  100

seq1  GTGGGAAGCATTGCTTTTGAGCTTACATTTGTATGAGTCATATCAGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGCATTGCTTTTGAGCTTACATTTGTATGAGTCATATCAGAGGC  150

seq1  ATAAGCAACATCACAGTCAAGTCACAAAATATTTACATCACACCTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAACATCACAGTCAAGTCACAAAATATTTACATCACACCTGGAAA  200

seq1  TTTCCTTATTTAATTATTAGTTCTTTTCCTTTTCCACAGGAATATCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATTTAATTATTAGTTCTTTTCCTTTTCCACAGGAATATCTGGT  250

seq1  AGTCTCAAGTTTTAACCATATAAGAAAAAGAAACTGAACCCAAAATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAGTTTTAACCATATAAGAAAAAGAAACTGAACCCAAAATATAC  300

seq1  AGCACACACACCATGGTCCTGTTTACCTATATTTAAACTACCGTACATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACACACCATGGTCCTGTTTACCTATATTTAAACTACCGTACATCA  350

seq1  TACTTCTCTAAATTTGCCCCGTCTTCATTGATTTTTGAGATCAATGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTCTAAATTTGCCCCGTCTTCATTGATTTTTGAGATCAATGTAGT  400

seq1  TTTCCCTCTTTGGGATTTGGTATGATTCTGGTAAGTACAAAGGGGCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCTTTGGGATTTGGTATGATTCTGGTAAGTACAAAGGGGCCTCT  450

seq1  TGAGTAAAACATGAATGACATTGGTTATATTACGTTTCGATATGAGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAAACATGAATGACATTGGTTATATTACGTTTCGATATGAGTTAT  500

seq1  GGATATGACTACACAGCAATATTCAATGCTTGCACATTCATTGATTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGACTACACAGCAATATTCAATGCTTGCACATTCATTGATTTCCA  550

seq1  TAATTACCACTTATAATTTTCTATGTTTTAAACAAATAAATAAAAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACCACTTATAATTTTCTATGTTTTAAACAAATAAATAAAAAACAA  600

seq1  CACTTAACACTTCCTGAGGAAAAATATACTTGCAGAAAATTCCTTAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAACACTTCCTGAGGAAAAATATACTTGCAGAAAATTCCTTAGTTG  650

seq1  TATTAAAAGGTTTACTACATTGTGAACAAGTGCTGTGCTGTTTTCTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGGTTTACTACATTGTGAACAAGTGCTGTGCTGTTTTCTCTTC  700

seq1  ATAGATAGATAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  750

seq1  AGAGAGAGAGAGAGAGATAGATAGATAGAT  780
      ||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGATAGATAGATAGAT  780


seq1: chr11_92372877_92373769
seq2: B6Ng01-201D13.g_61_953 (reverse)

seq1  ACACACACACTTTATTCTATCTTCTAGCAGCACAAAGAGGATACAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACTTTATTCTATCTTCTAGCAGCACAAAGAGGATACAGAAAG  50

seq1  CTTGATGAGGCGACAAAATAATTACTTTTGGCCCTCCTGCCCAAGGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGAGGCGACAAAATAATTACTTTTGGCCCTCCTGCCCAAGGCAAA  100

seq1  CAGCTAGAAATTTTCGACCTAAGAATATCCTGATACCATCAAAGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAAATTTTCGACCTAAGAATATCCTGATACCATCAAAGAAGAAA  150

seq1  TAGATCATAAAAATGTACAGATGAAGAGGTTGCAGGCCAGGAATCCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCATAAAAATGTACAGATGAAGAGGTTGCAGGCCAGGAATCCCAGA  200

seq1  GATATAATTCTAACGTTTCCTTTTGCTTTCACCTGGTGCTCTTGCACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATTCTAACGTTTCCTTTTGCTTTCACCTGGTGCTCTTGCACCTT  250

seq1  CACGAAGGGGTAACTGAGAGCAAAGTTTGGATAGTTGCAGCTCTGGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGGGGTAACTGAGAGCAAAGTTTGGATAGTTGCAGCTCTGGGTAA  300

seq1  GTAGATAAAAAACTGTAAGTTAAAGGCTCCAGTGATTTTCAATGAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAAAAAACTGTAAGTTAAAGGCTCCAGTGATTTTCAATGAATAAT  350

seq1  TCCAGGTTTGTGCTCCACGAGTAAAGATAATAACAAGGCCAGGAAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTTGTGCTCCACGAGTAAAGATAATAACAAGGCCAGGAAATGAA  400

seq1  GTTCACACAGAGCATAGGAAGTCTAACATTGCTGATGCTTCCGAAGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACACAGAGCATAGGAAGTCTAACATTGCTGATGCTTCCGAAGCATC  450

seq1  AGTTATAATTATAGAGAATGCAGTGGGATTTCTCGAGTGTTGAATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAATTATAGAGAATGCAGTGGGATTTCTCGAGTGTTGAATATATA  500

seq1  TTAACTCTTGTTCCAAGAGTTACTGACTTCGTAATCATCCATTCATAACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCTTGTTCCAAGAGTTACTGACTTCGTAATCATCCATTCATAACG  550

seq1  GTGATCTCATAACTGGGACTCTTTGAGGGTTTGGTTTGTTTAGGAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCATAACTGGGACTCTTTGAGGGTTTGGTTTGTTTAGGAATAAA  600

seq1  AATATGTTTAACATCTTTACGTATTTGTTTACTTAGTTTGTAGTTCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTAACATCTTTACGTATTTGTTTACTTAGTTTGTAGTTCTGGA  650

seq1  CATCAAACCTTGGGCCTTTTGGATGTCAGGATTACATTCTTCATTGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAACCTTGGGCCTTTTGGATGTCAGGATTACATTCTTCATTGAGCT  700

seq1  ACATTACTGACCTTCGATATTTATTCCTAAGTTCTCCACAACACGTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACTGACCTTCGATATTTATTCCTAAGTTCTCCACAACACGTGTAG  750

seq1  TCTCTTCAGTATACAGCTCCTTCAGCATTCAGCACCATAAGCAGAATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAGTATACAGCTCCTTCAGCATTCAGCACCATAAGCAGAATCTA  800

seq1  CCTTATTGTGTCTGATAGTCATGTGAATTTGATTTCCCCTTTCTTTAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTGTGTCTGATAGTCATGTGAATTTGATTTCCCCTTTCTTTAACT  850

seq1  TATTTCTTGTGGATGTGCTGATCTTCATCCAAGAGGAGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTGTGGATGTGCTGATCTTCATCCAAGAGGAGAATTC  893


| Home | SequenceCutter | Blast | Download |